SRR1547047_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547047_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1577175
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6593	0.4180259007402476	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCCGT	20	7.034087E-4	45.0	14
CTATCGA	20	7.034087E-4	45.0	15
TCGTACA	55	1.8189894E-12	45.0	34
GTAAGCG	45	3.8562575E-10	45.0	1
CGCTTAT	20	7.034087E-4	45.0	43
CACGACG	345	0.0	43.695652	26
CGGTCTA	345	0.0	43.04348	31
TAGTACG	110	0.0	42.954544	1
TCACGAC	355	0.0	42.46479	25
GCGTAAG	60	3.6379788E-12	41.250004	1
CGTAAAC	55	6.184564E-11	40.909092	39
CGTTTTT	3870	0.0	40.87209	1
GCGGGTC	100	0.0	40.500004	5
TAGACGG	95	0.0	40.263157	2
CTCCACG	175	0.0	39.857143	26
TTCGCGG	125	0.0	39.600002	2
ACGACGG	375	0.0	39.600002	27
TTACACG	290	0.0	39.56897	34
TAATGCG	40	3.4593177E-7	39.375	1
TACCGCG	40	3.4593177E-7	39.375	1