##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547047_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1577175 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.434604910678903 31.0 31.0 33.0 30.0 34.0 2 31.839658249718642 31.0 31.0 34.0 30.0 34.0 3 31.968839222026723 33.0 31.0 34.0 30.0 34.0 4 35.70698051896587 37.0 35.0 37.0 33.0 37.0 5 35.61261052197759 37.0 35.0 37.0 33.0 37.0 6 35.67872430136161 37.0 35.0 37.0 33.0 37.0 7 36.00661879626548 37.0 35.0 37.0 35.0 37.0 8 35.991626801084216 37.0 35.0 37.0 35.0 37.0 9 37.76419103777324 39.0 38.0 39.0 35.0 39.0 10 37.205719086341084 39.0 37.0 39.0 33.0 39.0 11 36.911541839047665 39.0 37.0 39.0 33.0 39.0 12 36.33036093014409 38.0 35.0 39.0 32.0 39.0 13 36.11728311696546 38.0 35.0 39.0 32.0 39.0 14 37.06681186298287 39.0 35.0 41.0 31.0 41.0 15 37.32704424049329 39.0 35.0 41.0 32.0 41.0 16 37.42873999397657 39.0 35.0 41.0 32.0 41.0 17 37.37958057920015 39.0 35.0 41.0 32.0 41.0 18 37.27168640131882 39.0 35.0 41.0 32.0 41.0 19 37.230561605402066 39.0 35.0 41.0 32.0 41.0 20 37.086291629020245 39.0 35.0 41.0 32.0 41.0 21 36.9960207332731 39.0 35.0 41.0 32.0 41.0 22 36.92736126301774 39.0 35.0 41.0 32.0 41.0 23 36.90536053386593 38.0 35.0 41.0 32.0 41.0 24 36.8246301139696 38.0 35.0 41.0 31.0 41.0 25 36.76267630415141 38.0 35.0 41.0 31.0 41.0 26 36.63398164439583 38.0 35.0 41.0 31.0 41.0 27 36.55028769794094 38.0 35.0 41.0 31.0 41.0 28 36.46559766671422 38.0 35.0 40.0 31.0 41.0 29 36.51432466276729 38.0 35.0 41.0 31.0 41.0 30 36.46616006467259 38.0 35.0 40.0 31.0 41.0 31 36.36758444687495 38.0 35.0 41.0 30.0 41.0 32 36.31170795885048 38.0 35.0 41.0 30.0 41.0 33 36.215731925753325 38.0 35.0 41.0 30.0 41.0 34 36.10213704883732 38.0 35.0 41.0 30.0 41.0 35 36.03707958850476 38.0 35.0 41.0 30.0 41.0 36 35.939297795108345 38.0 35.0 41.0 29.0 41.0 37 35.92623836923613 38.0 35.0 41.0 29.0 41.0 38 35.84701887869133 38.0 35.0 41.0 29.0 41.0 39 35.78299808201373 38.0 35.0 41.0 29.0 41.0 40 35.6635928162696 38.0 35.0 40.0 29.0 41.0 41 35.62327325756495 38.0 35.0 40.0 29.0 41.0 42 35.58294165200437 38.0 35.0 40.0 28.0 41.0 43 35.50346156894447 38.0 34.0 40.0 28.0 41.0 44 35.383202244519474 38.0 34.0 40.0 27.0 41.0 45 35.28719767939512 38.0 34.0 40.0 27.0 41.0 46 35.27546721194541 37.0 34.0 40.0 27.0 41.0 47 35.25671723175932 37.0 34.0 40.0 27.0 41.0 48 35.16764404710955 37.0 34.0 40.0 27.0 41.0 49 35.101892941493496 37.0 34.0 40.0 27.0 41.0 50 35.005359582798356 37.0 34.0 40.0 27.0 41.0 51 34.645353242347866 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 3.0 11 6.0 12 16.0 13 10.0 14 20.0 15 47.0 16 104.0 17 250.0 18 610.0 19 1168.0 20 2069.0 21 3297.0 22 4880.0 23 7409.0 24 10634.0 25 15336.0 26 20531.0 27 24242.0 28 26856.0 29 30236.0 30 36143.0 31 43946.0 32 55481.0 33 72501.0 34 126517.0 35 187351.0 36 104891.0 37 139186.0 38 218285.0 39 444844.0 40 302.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.19940716787928 22.901580357284384 27.9303818536307 12.968630621205637 2 32.67145370678587 24.90218270008084 28.991900074500293 13.434463518632999 3 30.46453310507712 24.878596224261734 30.77496156101891 13.88190910964224 4 27.474820485995533 27.132626373103808 29.886347424984542 15.506205715916115 5 24.767194509169876 30.98673260735175 29.2173030893845 15.028769794093872 6 23.549637801765815 40.29102667744544 25.813812671390302 10.345522849398451 7 86.45908031765657 4.457590311791653 6.944695420609634 2.1386339499421436 8 87.50836146908237 3.6068920696815505 6.71301535974131 2.1717311014947613 9 82.43619129139125 5.88146527810801 8.3416868768526 3.3406565536481367 10 45.2192052245312 30.682898219918524 14.234818583860385 9.863077971689888 11 36.62009605782491 24.783172444402172 24.12287793047696 14.473853567295954 12 34.335504937625814 23.153359646202862 26.773249639386876 15.737885776784442 13 25.42875711319289 30.59127871035237 26.646757652131186 17.33320652432355 14 17.043447936975923 33.59405265744131 30.496742593561272 18.865756812021495 15 16.64748680393742 28.424619969248816 38.72239922646504 16.205494000348725 16 22.74795124193574 25.267963288791666 35.76280374720624 16.22128172206635 17 22.7041387290567 24.292421576553014 28.205494000348725 24.797945694041562 18 23.821199296209997 26.585255282387816 31.59750820295782 17.99603721844437 19 26.75657425460079 27.671247642144976 26.90646250416092 18.665715599093318 20 28.51446415267805 27.603404821912598 26.96954998652654 16.912581038882813 21 25.499896967679554 26.57580801115919 29.965603056097134 17.95869196506412 22 23.67657362055574 23.406724047743594 30.60776388162379 22.30893845007688 23 20.443514511706056 27.462710225561526 30.712191101177737 21.381584161554677 24 21.149460269152122 25.720037408657888 34.905511436587574 18.22499088560242 25 21.280834403284356 27.380791605243555 31.687923026931063 19.65045096454103 26 19.431832231680062 33.28584335917067 27.09800751343383 20.18431689571544 27 18.672373072106772 32.425254014297714 30.254854407405645 18.647518506189865 28 16.873967695404758 29.181796566646064 35.03523705359266 18.908998684356522 29 18.885539017547195 27.766037376955634 33.422860494238115 19.925563111259052 30 20.760093204622187 29.24329893638943 31.50962955918018 18.4869782998082 31 25.665509534452426 27.027565108500962 28.80796360581419 18.498961751232425 32 27.048488595114684 27.532391776435716 27.639481985195047 17.779637643254553 33 25.99369125176344 27.69496092697386 27.287523578550253 19.023824242712443 34 20.50634837605212 28.05085041292184 29.784075958596855 21.658725252429186 35 20.803652099481667 28.670946470746745 30.364607605370363 20.160793824401225 36 26.354272671073282 28.179561557848686 27.42916924247468 18.036996528603357 37 21.898521089923438 31.528080270103192 27.64969011048235 18.92370852949102 38 21.227130787642462 32.028405218190755 25.928955252270676 20.81550874189611 39 21.26942159240414 30.262336138982675 27.549003756716917 20.91923851189627 40 23.78949704376496 26.96695040182605 27.78201531218793 21.46153724222106 41 19.433417344302313 26.2953698860304 29.129678063626418 25.141534706040865 42 21.19961323252017 26.981089606416536 27.20541474471761 24.61388241634568 43 21.533818377795743 26.936579643983706 27.920807773392298 23.608794204828254 44 20.425127205287936 28.56943585841774 29.52158130835196 21.483855627942365 45 19.87712206952304 32.60640068476866 26.575110561605403 20.941366684102906 46 21.868403950100653 30.96530188469891 27.15995371471143 20.006340450489006 47 20.86718341338152 29.12111845546626 28.004882146876536 22.006815984275683 48 20.766877486645427 27.50899551413128 31.16293372644126 20.56119327278203 49 22.23767178658044 27.447873571417247 29.90841219268629 20.406042449316026 50 20.01033493429708 30.769445369093475 28.608302819915355 20.61191687669409 51 19.67505191243838 31.175487818409497 27.596747348899136 21.552712920252983 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1248.0 1 2595.5 2 3943.0 3 8299.0 4 12655.0 5 9346.0 6 6037.0 7 6044.0 8 6051.0 9 6125.0 10 6199.0 11 6111.5 12 6024.0 13 6085.5 14 6147.0 15 5984.5 16 5822.0 17 5828.5 18 5835.0 19 5846.0 20 5857.0 21 6920.5 22 7984.0 23 9443.5 24 10903.0 25 12114.5 26 14953.5 27 16581.0 28 20511.5 29 24442.0 30 28193.5 31 31945.0 32 40287.5 33 48630.0 34 50534.5 35 52439.0 36 56911.0 37 61383.0 38 68606.5 39 75830.0 40 90417.5 41 105005.0 42 120404.0 43 135803.0 44 137121.0 45 138439.0 46 134542.0 47 130645.0 48 125095.5 49 119546.0 50 111572.5 51 103599.0 52 97892.5 53 92186.0 54 85304.0 55 78422.0 56 71673.5 57 64925.0 58 61611.5 59 58298.0 60 51632.5 61 44967.0 62 38418.5 63 31870.0 64 27417.5 65 22965.0 66 19337.5 67 15710.0 68 12894.0 69 10078.0 70 8298.0 71 6518.0 72 5406.0 73 4294.0 74 3448.5 75 1876.5 76 1150.0 77 847.5 78 545.0 79 367.5 80 190.0 81 134.5 82 79.0 83 49.0 84 19.0 85 21.0 86 23.0 87 15.5 88 8.0 89 6.0 90 4.0 91 3.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1577175.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.868753410323905 #Duplication Level Percentage of deduplicated Percentage of total 1 81.13541165591305 15.309240753805433 2 6.22311720973206 2.348449281479544 3 2.0186860050053475 1.1427026532395337 4 1.062904227076886 0.8022271103801875 5 0.6522729352808229 0.6153788586021005 6 0.5005943792738308 0.5667355140667243 7 0.3801475566369571 0.5021037354003919 8 0.3345522516078219 0.5050067150765305 9 0.29380899818828515 0.49894285828941504 >10 4.403569758273906 20.88607241551997 >50 1.7910023331082845 24.16978732982348 >100 1.198854233674371 31.60324798427822 >500 0.004401328731365851 0.5647874710262826 >1k 3.3856374856660394E-4 0.06413828988919666 >5k 3.3856374856660394E-4 0.4211790291229816 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6593 0.4180259007402476 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2680900978014487E-4 0.0 0.0 0.02238179022619557 0.0 2 1.2680900978014487E-4 0.0 0.0 0.06422876345364338 0.0 3 1.2680900978014487E-4 0.0 0.0 0.09434590327642779 0.0 4 1.2680900978014487E-4 0.0 0.0 0.1518537892117235 0.0 5 1.2680900978014487E-4 0.0 0.0 0.27517555122291437 0.0 6 1.2680900978014487E-4 0.0 0.0 0.3952002789798215 0.0 7 1.2680900978014487E-4 0.0 0.0 0.47312441548972056 0.0 8 1.2680900978014487E-4 0.0 0.0 0.624027137128093 0.0 9 1.2680900978014487E-4 0.0 0.0 0.6772235167308637 0.0 10 1.2680900978014487E-4 0.0 0.0 0.7751200722811356 0.0 11 1.2680900978014487E-4 0.0 0.0 0.9281151425808803 0.0 12 1.2680900978014487E-4 0.0 0.0 1.0554313884001458 0.0 13 1.2680900978014487E-4 0.0 0.0 1.1053307337486329 0.0 14 1.2680900978014487E-4 0.0 0.0 1.1280295464992787 0.0 15 1.2680900978014487E-4 0.0 0.0 1.1665794854724427 0.0 16 1.2680900978014487E-4 0.0 0.0 1.2391776435715758 0.0 17 1.2680900978014487E-4 0.0 0.0 1.3223009494824607 0.0 18 1.2680900978014487E-4 0.0 0.0 1.4288839222026726 0.0 19 1.2680900978014487E-4 0.0 0.0 1.5038914514876283 0.0 20 1.2680900978014487E-4 0.0 0.0 1.5893607240794458 0.0 21 1.2680900978014487E-4 0.0 0.0 1.6937879436333951 0.0 22 1.2680900978014487E-4 0.0 0.0 1.8065845578328341 0.0 23 1.2680900978014487E-4 0.0 0.0 1.9157671152535387 0.0 24 1.2680900978014487E-4 0.0 0.0 2.0013631968551366 0.0 25 1.2680900978014487E-4 0.0 0.0 2.081379682026408 0.0 26 1.2680900978014487E-4 0.0 0.0 2.165137032986194 0.0 27 1.2680900978014487E-4 0.0 0.0 2.2543471713665255 0.0 28 1.2680900978014487E-4 0.0 0.0 2.352053513402127 0.0 29 1.2680900978014487E-4 0.0 0.0 2.4670692852727187 0.0 30 1.2680900978014487E-4 0.0 0.0 2.610997511373183 0.0 31 1.2680900978014487E-4 0.0 0.0 2.7303247895762994 0.0 32 1.2680900978014487E-4 0.0 0.0 2.832342637944426 0.0 33 1.902135146702173E-4 0.0 0.0 2.948436286398149 0.0 34 1.902135146702173E-4 0.0 0.0 3.078288712413017 0.0 35 2.5361801956028975E-4 0.0 0.0 3.2200611853472187 0.0 36 2.5361801956028975E-4 0.0 0.0 3.3468701951273636 0.0 37 2.5361801956028975E-4 0.0 0.0 3.4873111734588744 0.0 38 2.5361801956028975E-4 6.340450489007244E-5 0.0 3.6874157908919427 0.0 39 2.5361801956028975E-4 6.340450489007244E-5 0.0 4.071710495030672 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCCGT 20 7.034087E-4 45.0 14 CTATCGA 20 7.034087E-4 45.0 15 TCGTACA 55 1.8189894E-12 45.0 34 GTAAGCG 45 3.8562575E-10 45.0 1 CGCTTAT 20 7.034087E-4 45.0 43 CACGACG 345 0.0 43.695652 26 CGGTCTA 345 0.0 43.04348 31 TAGTACG 110 0.0 42.954544 1 TCACGAC 355 0.0 42.46479 25 GCGTAAG 60 3.6379788E-12 41.250004 1 CGTAAAC 55 6.184564E-11 40.909092 39 CGTTTTT 3870 0.0 40.87209 1 GCGGGTC 100 0.0 40.500004 5 TAGACGG 95 0.0 40.263157 2 CTCCACG 175 0.0 39.857143 26 TTCGCGG 125 0.0 39.600002 2 ACGACGG 375 0.0 39.600002 27 TTACACG 290 0.0 39.56897 34 TAATGCG 40 3.4593177E-7 39.375 1 TACCGCG 40 3.4593177E-7 39.375 1 >>END_MODULE