SRR1547046_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547046_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	913880
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3924	0.42937803650369855	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCACGC	25	3.8901755E-5	45.000004	12
TACGCGC	25	3.8901755E-5	45.000004	15
ATATACG	25	3.8901755E-5	45.000004	1
GACGTAA	20	7.032527E-4	45.0	35
CGTTAGA	20	7.032527E-4	45.0	13
ATATCGG	20	7.032527E-4	45.0	2
GCCGAAT	20	7.032527E-4	45.0	45
ACTACGG	20	7.032527E-4	45.0	2
ATGACGC	20	7.032527E-4	45.0	36
GCGATAT	40	6.8121153E-9	45.0	9
TATAGCG	35	1.2115561E-7	45.0	1
CGCAATA	20	7.032527E-4	45.0	25
TCGACCC	20	7.032527E-4	45.0	40
TATCGTG	35	1.2115561E-7	45.0	1
CCCGCTT	20	7.032527E-4	45.0	44
AATACGG	115	0.0	43.04348	2
CGTTTTT	2415	0.0	41.92547	1
CGACGGT	175	0.0	41.142857	28
CGGTCTA	165	0.0	40.909092	31
ACGGTCT	165	0.0	40.909092	30