##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547046_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 913880 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.449644373440716 31.0 31.0 33.0 30.0 34.0 2 31.869882260252986 31.0 31.0 34.0 30.0 34.0 3 31.998013962445835 33.0 31.0 34.0 30.0 34.0 4 35.73843393005646 37.0 35.0 37.0 35.0 37.0 5 35.64350242920296 37.0 35.0 37.0 33.0 37.0 6 35.698279861688626 37.0 35.0 37.0 33.0 37.0 7 36.024051297763386 37.0 35.0 37.0 35.0 37.0 8 36.01539151748588 37.0 35.0 37.0 35.0 37.0 9 37.80976605243577 39.0 38.0 39.0 35.0 39.0 10 37.23796012605594 39.0 37.0 39.0 34.0 39.0 11 36.93152602092179 39.0 37.0 39.0 33.0 39.0 12 36.249394887731434 38.0 35.0 39.0 32.0 39.0 13 35.982620256488815 38.0 35.0 39.0 32.0 39.0 14 36.911573729592504 39.0 35.0 41.0 31.0 41.0 15 37.202097649582 39.0 35.0 41.0 32.0 41.0 16 37.32209371033396 39.0 35.0 41.0 32.0 41.0 17 37.28800608394975 39.0 35.0 41.0 32.0 41.0 18 37.193710333960695 39.0 35.0 41.0 32.0 41.0 19 37.16706788637458 39.0 35.0 41.0 32.0 41.0 20 36.99798113537882 39.0 35.0 41.0 32.0 41.0 21 36.90157569921653 38.0 35.0 41.0 32.0 41.0 22 36.82786580295006 38.0 35.0 41.0 32.0 41.0 23 36.78882128944719 38.0 35.0 41.0 32.0 41.0 24 36.71107475817394 38.0 35.0 41.0 31.0 41.0 25 36.64847572985512 38.0 35.0 41.0 31.0 41.0 26 36.52458637895566 38.0 35.0 40.0 31.0 41.0 27 36.41996761062722 38.0 35.0 40.0 31.0 41.0 28 36.36251696065129 38.0 35.0 40.0 31.0 41.0 29 36.4226101895216 38.0 35.0 40.0 31.0 41.0 30 36.38945594607607 38.0 35.0 40.0 31.0 41.0 31 36.2930330021447 38.0 35.0 40.0 31.0 41.0 32 36.23061889963672 38.0 35.0 41.0 30.0 41.0 33 36.12027618505712 38.0 35.0 41.0 30.0 41.0 34 35.99654440407931 38.0 35.0 41.0 30.0 41.0 35 35.922450431128816 38.0 35.0 41.0 30.0 41.0 36 35.82518492581083 38.0 35.0 40.0 30.0 41.0 37 35.79884995841905 38.0 35.0 40.0 29.0 41.0 38 35.73258305247954 38.0 35.0 40.0 29.0 41.0 39 35.66083730905589 38.0 35.0 40.0 29.0 41.0 40 35.519558366525146 38.0 35.0 40.0 29.0 41.0 41 35.476134722283014 38.0 34.0 40.0 29.0 41.0 42 35.451406092703635 37.0 34.0 40.0 28.0 41.0 43 35.370445791570006 37.0 34.0 40.0 28.0 41.0 44 35.236307830349716 37.0 34.0 40.0 28.0 41.0 45 35.137647174683764 37.0 34.0 40.0 27.0 41.0 46 35.144057206635445 37.0 34.0 40.0 27.0 41.0 47 35.1320665732919 37.0 34.0 40.0 28.0 41.0 48 35.06560817612816 36.0 34.0 40.0 27.0 41.0 49 35.003456690156256 36.0 34.0 40.0 27.0 41.0 50 34.9230052085613 36.0 34.0 40.0 27.0 41.0 51 34.55371164704338 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 3.0 12 4.0 13 6.0 14 9.0 15 21.0 16 66.0 17 142.0 18 307.0 19 645.0 20 1057.0 21 1766.0 22 2777.0 23 4162.0 24 6006.0 25 8624.0 26 11670.0 27 14034.0 28 15565.0 29 17546.0 30 21043.0 31 26112.0 32 32792.0 33 43393.0 34 77594.0 35 118688.0 36 62574.0 37 82986.0 38 124588.0 39 239536.0 40 161.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.60123867466188 23.79951415940824 29.535825272464656 13.063421893465224 2 31.68665470302447 24.73508556922134 29.88379218278111 13.694467544973083 3 29.310631592769294 24.966297544535387 32.24591850133497 13.477152361360353 4 27.690178141550316 27.0739046701974 30.267978290366347 14.967938897885938 5 24.329124173852147 30.87823346610058 29.61417253906421 15.178469820983063 6 22.395391079791658 40.92506674836959 26.078478574867596 10.601063596971155 7 87.3802906289666 4.042106184619425 6.608963977765134 1.968639208648838 8 88.8350768153368 2.891517485884361 6.356414408893947 1.9169912898848864 9 84.25241826060315 4.937737996235829 7.798398039129864 3.0114457040311637 10 47.96701974000963 26.72167024116952 14.19540858756073 11.115901431260122 11 40.15187989670416 23.808705738171312 21.374359872193285 14.665054492931237 12 36.315489998686914 21.698034752921608 25.879108854554207 16.107366393837268 13 24.99037072701011 30.224974832581957 27.513568521031207 17.271085919376723 14 17.649582002013396 33.91440889394669 30.267759443252945 18.168249660786977 15 17.483148772267693 26.063268700485843 40.397316934389636 16.056265592856832 16 22.10519980741454 22.873243751914913 37.93441152011205 17.087144920558497 17 22.870070468770518 22.664354182168335 27.441239550050334 27.024335799010814 18 24.590427627259594 25.746159233159716 30.930100231977942 18.73331290760275 19 27.68350330459141 26.43673129951416 26.689937409725566 19.18982798616886 20 29.501028581433008 26.4546767628135 25.964787499452886 18.079507156300608 21 26.613559767146672 25.697137479756645 29.69777213638552 17.991530616711167 22 24.685626121591454 21.350724383945376 30.657197881559945 23.306451612903224 23 21.51704819013437 26.103098875125834 30.13918676412658 22.24066617061321 24 21.456536963277454 25.12758786711603 34.60257364205366 18.813301527552852 25 21.13253381187902 26.349848995491747 32.13791745086883 20.379699741760408 26 20.361754278461067 32.354028975357814 26.732722020396547 20.551494725784565 27 19.454304722720707 31.186041931106928 30.207138792839324 19.15251455333304 28 17.420886768503525 28.291022891408062 34.876679651595396 19.41141068849302 29 19.579704118702672 26.69343896354007 33.844706088326696 19.882150829430557 30 21.151354663631984 27.745546461242178 31.76861294699523 19.334485928130608 31 27.67715673830262 25.485840591762592 27.273821508294304 19.56318116164048 32 28.66229701930231 25.81826935702718 27.401628222523744 18.117805401146757 33 26.847179060708186 26.4447192191535 26.799032695758747 19.90906902437957 34 21.487284982711078 26.92946557534906 28.809581126624938 22.77366831531492 35 21.15212062852891 27.677813279642844 29.91640040267869 21.25366568914956 36 27.706810522169214 26.020046395588043 27.42471659298814 18.848426489254607 37 22.182343414890358 30.890051210224538 26.967544973081804 19.9600604018033 38 22.516413533505496 31.525802074670633 24.759158751696063 21.19862564012781 39 21.694204928436996 28.92666433229746 27.240556747056505 22.138573992209043 40 24.23403510307699 25.524138836608746 27.80277498139799 22.43905107891627 41 19.977021053092308 24.978443559329452 28.97207510832932 26.072460279248915 42 22.20007003107629 25.913796122029147 26.68982798616886 25.196305860725698 43 21.457740622401193 25.926926948833547 27.625399395981965 24.9899330327833 44 21.093688449249353 27.497592681752526 29.734100757211014 21.674618111787105 45 21.23298463693264 31.34054799317197 25.607191316146537 21.81927605374885 46 22.367269225718914 29.293561517923578 27.492012080360663 20.84715717599685 47 21.935265023854335 27.105199807414543 28.294196174552454 22.665338994178665 48 22.06558847988795 26.754935002407322 30.073751477218014 21.105725040486718 49 21.97465750426752 25.38484264892546 31.08296494069243 21.55753490611459 50 20.69308880815862 29.73464787499453 28.171641791044777 21.400621525802073 51 20.20473147459185 31.119074714404515 27.25401584453101 21.42217796647262 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 508.0 1 1284.0 2 2060.0 3 4753.0 4 7446.0 5 5375.5 6 3305.0 7 3321.5 8 3338.0 9 3476.0 10 3614.0 11 3642.0 12 3670.0 13 3425.5 14 3181.0 15 3035.5 16 2890.0 17 2894.5 18 2899.0 19 3040.5 20 3182.0 21 3128.0 22 3074.0 23 3945.5 24 4817.0 25 5635.0 26 7749.5 27 9046.0 28 10782.5 29 12519.0 30 13752.0 31 14985.0 32 17553.0 33 20121.0 34 23365.0 35 26609.0 36 28445.0 37 30281.0 38 34026.5 39 37772.0 40 47235.0 41 56698.0 42 66545.0 43 76392.0 44 78329.0 45 80266.0 46 79183.0 47 78100.0 48 74038.5 49 69977.0 50 68771.0 51 67565.0 52 61066.5 53 54568.0 54 50851.5 55 47135.0 56 43755.0 57 40375.0 58 38562.0 59 36749.0 60 32974.5 61 29200.0 62 26842.0 63 24484.0 64 20800.5 65 17117.0 66 14785.0 67 12453.0 68 10778.0 69 9103.0 70 7208.5 71 5314.0 72 4263.5 73 3213.0 74 2515.5 75 1320.0 76 822.0 77 608.5 78 395.0 79 336.5 80 278.0 81 164.5 82 51.0 83 33.0 84 15.0 85 12.5 86 10.0 87 7.0 88 4.0 89 2.5 90 1.0 91 1.0 92 1.0 93 2.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 913880.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.24046677448105 #Duplication Level Percentage of deduplicated Percentage of total 1 78.83830774625498 16.74562456240641 2 5.81531272599751 2.4703991347953385 3 2.0369527315894436 1.2979748044954196 4 1.1700306218943575 0.9940798619788999 5 0.8317114745420191 0.8832969970482197 6 0.6551932663474868 0.8349966482830503 7 0.5614349503277349 0.8347598285928071 8 0.5016427303260507 0.8524100596920348 9 0.4143454780379273 0.7920802223478955 >10 6.929916691586955 36.036052682724495 >50 1.907963845338572 28.44657139902725 >100 0.33459398592803397 9.05599488987745 >500 0.0020750014631195908 0.3233929723173456 >1k 5.187503657798977E-4 0.43236593641337795 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3924 0.42937803650369855 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0942355670328708E-4 0.0 0.0 0.028450124742854643 0.0 2 1.0942355670328708E-4 0.0 0.0 0.09607388278548606 0.0 3 1.0942355670328708E-4 0.0 0.0 0.14093754103383377 0.0 4 1.0942355670328708E-4 0.0 0.0 0.21633037160239857 0.0 5 1.0942355670328708E-4 0.0 0.0 0.38484264892546066 0.0 6 1.0942355670328708E-4 0.0 0.0 0.5404429465575349 0.0 7 1.0942355670328708E-4 0.0 0.0 0.6416597365080755 0.0 8 1.0942355670328708E-4 0.0 0.0 0.8375279030069593 0.0 9 1.0942355670328708E-4 0.0 0.0 0.9079966735238763 0.0 10 1.0942355670328708E-4 0.0 0.0 1.0315358690418874 0.0 11 1.0942355670328708E-4 0.0 0.0 1.2209480456952773 0.0 12 1.0942355670328708E-4 0.0 0.0 1.362651551626034 0.0 13 1.0942355670328708E-4 0.0 0.0 1.4324637808027312 0.0 14 1.0942355670328708E-4 0.0 0.0 1.4601479406486628 0.0 15 1.0942355670328708E-4 0.0 0.0 1.5056681402372303 0.0 16 1.0942355670328708E-4 0.0 0.0 1.591346785135904 0.0 17 1.0942355670328708E-4 0.0 0.0 1.6970499409112794 0.0 18 1.0942355670328708E-4 0.0 0.0 1.8347047752440144 0.0 19 1.0942355670328708E-4 0.0 0.0 1.9242132446273035 0.0 20 1.0942355670328708E-4 0.0 0.0 2.0271808114850964 0.0 21 1.0942355670328708E-4 0.0 0.0 2.156081761281569 0.0 22 1.0942355670328708E-4 0.0 0.0 2.2908915831400183 0.0 23 1.0942355670328708E-4 0.0 0.0 2.4228563925241824 0.0 24 1.0942355670328708E-4 0.0 0.0 2.5302009016501072 0.0 25 1.0942355670328708E-4 0.0 0.0 2.629995185363505 0.0 26 1.0942355670328708E-4 0.0 0.0 2.7306648575305292 0.0 27 1.0942355670328708E-4 0.0 0.0 2.8444653565019475 0.0 28 1.0942355670328708E-4 0.0 0.0 2.9651595395456734 0.0 29 1.0942355670328708E-4 0.0 0.0 3.0986562787236838 0.0 30 1.0942355670328708E-4 0.0 0.0 3.2616973782115815 0.0 31 1.0942355670328708E-4 0.0 0.0 3.3981485534205804 0.0 32 1.0942355670328708E-4 0.0 0.0 3.5250798791963933 0.0 33 1.0942355670328708E-4 0.0 0.0 3.6551844881166016 0.0 34 1.0942355670328708E-4 0.0 0.0 3.797435111830875 0.0 35 1.0942355670328708E-4 0.0 0.0 3.9657285420405306 0.0 36 1.0942355670328708E-4 0.0 0.0 4.10217971724953 0.0 37 1.0942355670328708E-4 0.0 0.0 4.2516522957062195 0.0 38 1.0942355670328708E-4 0.0 0.0 4.4603230183393885 0.0 39 1.0942355670328708E-4 0.0 0.0 4.797785267212325 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCACGC 25 3.8901755E-5 45.000004 12 TACGCGC 25 3.8901755E-5 45.000004 15 ATATACG 25 3.8901755E-5 45.000004 1 GACGTAA 20 7.032527E-4 45.0 35 CGTTAGA 20 7.032527E-4 45.0 13 ATATCGG 20 7.032527E-4 45.0 2 GCCGAAT 20 7.032527E-4 45.0 45 ACTACGG 20 7.032527E-4 45.0 2 ATGACGC 20 7.032527E-4 45.0 36 GCGATAT 40 6.8121153E-9 45.0 9 TATAGCG 35 1.2115561E-7 45.0 1 CGCAATA 20 7.032527E-4 45.0 25 TCGACCC 20 7.032527E-4 45.0 40 TATCGTG 35 1.2115561E-7 45.0 1 CCCGCTT 20 7.032527E-4 45.0 44 AATACGG 115 0.0 43.04348 2 CGTTTTT 2415 0.0 41.92547 1 CGACGGT 175 0.0 41.142857 28 CGGTCTA 165 0.0 40.909092 31 ACGGTCT 165 0.0 40.909092 30 >>END_MODULE