SRR1547045_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547045_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	967202
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4412	0.45616117419112034	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGAAC	20	7.032733E-4	45.0	19
GCGGTAT	25	3.890346E-5	45.0	16
ATAGCGC	20	7.032733E-4	45.0	28
TTCGTAG	20	7.032733E-4	45.0	1
AACGGAT	20	7.032733E-4	45.0	29
ACGCTAG	45	3.8380676E-10	45.0	1
ATGCGCG	45	3.8380676E-10	45.0	36
CGTAAAT	20	7.032733E-4	45.0	16
ATACGAG	20	7.032733E-4	45.0	1
TCGACGG	45	3.8380676E-10	45.0	2
CGATATC	20	7.032733E-4	45.0	31
CGTCAAG	20	7.032733E-4	45.0	22
ATACCGG	20	7.032733E-4	45.0	2
ACCTTCG	20	7.032733E-4	45.0	34
CGGTCTA	155	0.0	43.54839	31
CGTTTTT	2675	0.0	40.8785	1
CGTTAGG	95	0.0	40.263157	2
TTCGAAT	45	1.927765E-8	40.0	23
TAGTACG	45	1.927765E-8	40.0	1
TCACGAC	170	0.0	39.705883	25