##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547045_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 967202 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42027621944537 31.0 31.0 33.0 30.0 34.0 2 31.824847343160993 31.0 31.0 34.0 30.0 34.0 3 31.955185162975262 33.0 31.0 34.0 30.0 34.0 4 35.691592862711204 37.0 35.0 37.0 33.0 37.0 5 35.60077522585768 37.0 35.0 37.0 33.0 37.0 6 35.652343564219265 37.0 35.0 37.0 33.0 37.0 7 35.995207826286546 37.0 35.0 37.0 35.0 37.0 8 35.978766586504165 37.0 35.0 37.0 35.0 37.0 9 37.76305053132644 39.0 38.0 39.0 35.0 39.0 10 37.18125479475849 39.0 37.0 39.0 33.0 39.0 11 36.90158208936706 39.0 37.0 39.0 33.0 39.0 12 36.28169916935656 38.0 35.0 39.0 32.0 39.0 13 36.03460394002494 38.0 35.0 39.0 32.0 39.0 14 36.98691379877213 39.0 35.0 41.0 31.0 41.0 15 37.25276209106267 39.0 35.0 41.0 32.0 41.0 16 37.37317954263949 39.0 35.0 41.0 32.0 41.0 17 37.31120283043253 39.0 35.0 41.0 32.0 41.0 18 37.23016081439037 39.0 35.0 41.0 32.0 41.0 19 37.192636078089166 39.0 35.0 41.0 32.0 41.0 20 37.03240377914851 39.0 35.0 41.0 32.0 41.0 21 36.93284960122084 39.0 35.0 41.0 32.0 41.0 22 36.8388816400297 38.0 35.0 41.0 31.0 41.0 23 36.8005111651961 38.0 35.0 41.0 31.0 41.0 24 36.71292036203399 38.0 35.0 41.0 31.0 41.0 25 36.64800114143684 38.0 35.0 41.0 31.0 41.0 26 36.54835701332296 38.0 35.0 41.0 31.0 41.0 27 36.46461545778441 38.0 35.0 40.0 31.0 41.0 28 36.38634328713133 38.0 35.0 40.0 31.0 41.0 29 36.417836191405726 38.0 35.0 40.0 31.0 41.0 30 36.40771317677176 38.0 35.0 40.0 31.0 41.0 31 36.32082646644651 38.0 35.0 40.0 30.0 41.0 32 36.25418992102994 38.0 35.0 41.0 30.0 41.0 33 36.150205437954014 38.0 35.0 41.0 30.0 41.0 34 36.049535670935335 38.0 35.0 41.0 30.0 41.0 35 35.97716402571542 38.0 35.0 41.0 30.0 41.0 36 35.87442437050378 38.0 35.0 41.0 29.0 41.0 37 35.843898172253574 38.0 35.0 41.0 29.0 41.0 38 35.786051931240834 38.0 35.0 41.0 29.0 41.0 39 35.731989801509926 38.0 35.0 40.0 29.0 41.0 40 35.60372186988861 38.0 35.0 40.0 29.0 41.0 41 35.57306333113455 38.0 35.0 40.0 29.0 41.0 42 35.524765250692205 38.0 35.0 40.0 28.0 41.0 43 35.452854729415364 38.0 34.0 40.0 28.0 41.0 44 35.33779603433409 37.0 34.0 40.0 28.0 41.0 45 35.22643977162992 37.0 34.0 40.0 27.0 41.0 46 35.188759948800765 37.0 34.0 40.0 27.0 41.0 47 35.19363586923931 37.0 34.0 40.0 27.0 41.0 48 35.12913951790836 37.0 34.0 40.0 27.0 41.0 49 35.060571628263794 37.0 34.0 40.0 27.0 41.0 50 34.98326202799415 37.0 34.0 40.0 27.0 41.0 51 34.61530476570561 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 5.0 13 6.0 14 13.0 15 27.0 16 68.0 17 158.0 18 365.0 19 711.0 20 1202.0 21 1998.0 22 2968.0 23 4556.0 24 6560.0 25 9257.0 26 12368.0 27 14768.0 28 16786.0 29 18825.0 30 22439.0 31 27737.0 32 34725.0 33 45449.0 34 79044.0 35 120617.0 36 65866.0 37 85389.0 38 131108.0 39 263983.0 40 200.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.47883482457646 22.794204313059733 28.45072694225198 13.276233920111826 2 32.03157148144855 25.520005128194523 28.810320905043618 13.638102485313306 3 29.946174635701745 24.45693867465121 31.287466320375685 14.309420369271361 4 26.9762676255839 27.232367178727916 30.55876642107853 15.232598774609645 5 24.62453551584881 31.46323105204497 28.94193767175833 14.97029576034789 6 22.815709644934564 40.30667843945732 26.53633884131753 10.341273074290584 7 86.6244073109857 4.564299908395557 6.7893780203101315 2.0219147603086016 8 86.93313289261188 3.748441380394168 6.946015413533058 2.3724103134608905 9 82.90398489664 5.520873612751007 8.087142086141261 3.487999404467733 10 45.486982036844424 28.070351384715913 14.780056286070542 11.662610292369123 11 37.811542986883815 24.301645364670463 23.137565885926623 14.7492457625191 12 36.129164331752825 22.4956110512592 25.63063351812755 15.744591098860425 13 24.823253053653733 30.263895235948645 26.60209552916557 18.310756181232048 14 17.349323099001033 33.622449085092875 29.580687384848254 19.447540431057835 15 16.113386862310044 27.962928116360388 38.527835963945485 17.395849057384083 16 20.67386130301633 24.747364045980053 37.411833308864125 17.16694134213949 17 21.290485338119648 25.072218626512356 27.58327629595472 26.054019739413274 18 22.76670230210442 26.369775910306224 31.32799559967825 19.53552618791111 19 26.58183088951429 27.73360683704128 26.39614062005662 19.288421653387815 20 28.34392402000823 26.650068961809424 27.23815707577114 17.7678499424112 21 24.780035607866814 27.280960957483547 29.76213862254214 18.176864812107503 22 24.244883695443146 23.041929193694802 29.479364186591837 23.233822924270214 23 21.410625701766538 27.136833877514725 29.6757037309683 21.776836689750432 24 20.371339182507896 25.648726946387622 35.120481554008364 18.859452317096117 25 20.62661160750288 27.2351587362309 32.14064900610214 19.997580650164082 26 19.29379798635652 32.09215861836514 27.112743770174173 21.501299625104167 27 18.77694628423018 32.30845262933699 30.08213382519887 18.83246726123395 28 17.18865345605158 29.330894683840604 34.45298913773958 19.02746272236823 29 18.240450288564332 27.01752064201687 33.955574947115494 20.786454122303304 30 20.490032071893978 29.168570784593083 31.40285069716564 18.9385464463473 31 26.535201540112613 27.48029884140025 26.588861478781062 19.39563813970608 32 26.992913579583167 27.014005347383485 27.33151916559312 18.661561907440223 33 25.636113242114885 27.809289062677706 26.488778972748193 20.065818722459216 34 20.496338924030347 27.39686228936665 29.19255750091501 22.914241285687993 35 20.54772426028896 27.79595162127456 29.882485768226285 21.773838350210195 36 26.05691468793489 27.939665137168863 27.036441198425976 18.966978976470273 37 21.48641131842159 30.868319130853738 28.67611936286319 18.96915018786148 38 21.116064689692536 31.925285514297947 25.625670749233354 21.332979046776167 39 21.312300843050366 30.373696497732634 26.960138626677775 21.35386403253922 40 23.61130353328467 26.594858157861545 27.91154278010178 21.882295528752007 41 19.522602310582485 26.026827901513848 29.357672957665514 25.09289683023815 42 21.397495042400656 26.18129408334557 26.938736685821574 25.482474188432196 43 21.418380028163714 25.983507064708306 27.440183126172197 25.15792978095579 44 19.889537035696783 28.14386239896113 29.889102793418544 22.07749777192355 45 20.41993296126352 32.373278798017374 26.000876755837975 21.20591148488113 46 20.921689574670026 31.515857080527127 27.10798778331724 20.454465561485605 47 20.586289110237573 28.086687165659292 28.907301680517616 22.41972204358552 48 20.935854144222198 26.738261500699956 31.249004861445695 21.07687949363215 49 20.65338988132779 26.757285448127693 31.196999179075313 21.392325491469208 50 19.837531353326398 30.19503681754173 29.36542728406269 20.60200454506918 51 18.720391397040125 31.488355069571817 27.358194048399405 22.433059484988657 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 899.0 1 1614.5 2 2330.0 3 5172.0 4 8014.0 5 5725.0 6 3436.0 7 3563.5 8 3691.0 9 3729.5 10 3768.0 11 3756.0 12 3744.0 13 3850.0 14 3956.0 15 3689.0 16 3422.0 17 3459.5 18 3497.0 19 3573.5 20 3650.0 21 3961.0 22 4272.0 23 5343.5 24 6415.0 25 6792.0 26 8539.5 27 9910.0 28 12266.0 29 14622.0 30 17754.5 31 20887.0 32 24344.5 33 27802.0 34 30383.0 35 32964.0 36 34931.0 37 36898.0 38 40165.0 39 43432.0 40 52111.0 41 60790.0 42 69224.0 43 77658.0 44 79700.0 45 81742.0 46 80974.0 47 80206.0 48 78407.5 49 76609.0 50 71825.0 51 67041.0 52 62274.5 53 57508.0 54 51944.0 55 46380.0 56 43387.5 57 40395.0 58 37975.5 59 35556.0 60 32404.0 61 29252.0 62 26366.0 63 23480.0 64 19683.0 65 15886.0 66 13318.5 67 10751.0 68 9273.5 69 7796.0 70 6275.5 71 4755.0 72 3907.0 73 3059.0 74 2414.5 75 1396.5 76 1023.0 77 744.5 78 466.0 79 326.0 80 186.0 81 126.0 82 66.0 83 48.5 84 31.0 85 21.5 86 12.0 87 8.5 88 5.0 89 2.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 967202.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.207330103841453 #Duplication Level Percentage of deduplicated Percentage of total 1 79.9962089256279 16.96506009741659 2 5.994378482051084 2.542495264724428 3 2.0354831917698846 1.295014919060543 4 1.1082762506948518 0.9401432117893387 5 0.6996320798938961 0.7418664234773517 6 0.5613275707926255 0.7142555454111986 7 0.4676540268431304 0.69423853251571 8 0.40986646887955597 0.6953738803219682 9 0.36491501563244244 0.6964985876729104 >10 5.933546532855311 31.471045027133254 >50 1.9364912914266257 29.24806553801477 >100 0.48927567601406785 13.181871988444998 >500 0.0024537395988669403 0.3548941518151041 >1k 4.90747919773388E-4 0.4591768322018296 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4412 0.45616117419112034 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0339101862899373E-4 0.0 0.0 0.036703811613292774 0.0 2 1.0339101862899373E-4 0.0 0.0 0.12510313254108243 0.0 3 1.0339101862899373E-4 0.0 0.0 0.17938341732130414 0.0 4 1.0339101862899373E-4 0.0 0.0 0.2735726352923174 0.0 5 1.0339101862899373E-4 0.0 0.0 0.4873852618170765 0.0 6 1.0339101862899373E-4 0.0 0.0 0.6660449420079777 0.0 7 1.0339101862899373E-4 0.0 0.0 0.7809123637047897 0.0 8 1.0339101862899373E-4 0.0 0.0 1.0206761359054262 0.0 9 1.0339101862899373E-4 0.0 0.0 1.092532893852577 0.0 10 1.0339101862899373E-4 0.0 0.0 1.237797275026313 0.0 11 1.0339101862899373E-4 0.0 0.0 1.4456132224705904 0.0 12 1.0339101862899373E-4 0.0 0.0 1.6128998906123022 0.0 13 1.0339101862899373E-4 0.0 0.0 1.681137962907438 0.0 14 1.0339101862899373E-4 0.0 0.0 1.7126722235892813 0.0 15 1.0339101862899373E-4 0.0 0.0 1.76726268142539 0.0 16 1.0339101862899373E-4 0.0 0.0 1.8698265719053517 0.0 17 1.0339101862899373E-4 0.0 0.0 1.9908974547199034 0.0 18 1.0339101862899373E-4 0.0 0.0 2.1411246047878314 0.0 19 1.0339101862899373E-4 0.0 0.0 2.233866348498039 0.0 20 1.0339101862899373E-4 0.0 0.0 2.340048924630015 0.0 21 1.0339101862899373E-4 0.0 0.0 2.491930330996007 0.0 22 1.0339101862899373E-4 0.0 0.0 2.637401494207001 0.0 23 1.0339101862899373E-4 0.0 0.0 2.7970372269701675 0.0 24 1.0339101862899373E-4 0.0 0.0 2.920486103213186 0.0 25 1.0339101862899373E-4 0.0 0.0 3.0332857045374184 0.0 26 1.0339101862899373E-4 0.0 0.0 3.153426068184309 0.0 27 1.0339101862899373E-4 0.0 0.0 3.2728426947007967 0.0 28 1.0339101862899373E-4 0.0 0.0 3.400530602707604 0.0 29 1.0339101862899373E-4 0.0 0.0 3.5405220419312613 0.0 30 1.0339101862899373E-4 0.0 0.0 3.69788317228459 0.0 31 1.0339101862899373E-4 0.0 0.0 3.847386585222115 0.0 32 1.0339101862899373E-4 0.0 0.0 3.9893424537997233 0.0 33 1.0339101862899373E-4 0.0 0.0 4.124784688203705 0.0 34 1.0339101862899373E-4 0.0 0.0 4.277803395774616 0.0 35 1.0339101862899373E-4 0.0 0.0 4.461012280785193 0.0 36 1.0339101862899373E-4 0.0 0.0 4.6137208153002165 0.0 37 1.0339101862899373E-4 0.0 0.0 4.7799735732556385 0.0 38 1.0339101862899373E-4 0.0 0.0 4.971246957719277 0.0 39 1.0339101862899373E-4 0.0 0.0 5.2538146116323166 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAC 20 7.032733E-4 45.0 19 GCGGTAT 25 3.890346E-5 45.0 16 ATAGCGC 20 7.032733E-4 45.0 28 TTCGTAG 20 7.032733E-4 45.0 1 AACGGAT 20 7.032733E-4 45.0 29 ACGCTAG 45 3.8380676E-10 45.0 1 ATGCGCG 45 3.8380676E-10 45.0 36 CGTAAAT 20 7.032733E-4 45.0 16 ATACGAG 20 7.032733E-4 45.0 1 TCGACGG 45 3.8380676E-10 45.0 2 CGATATC 20 7.032733E-4 45.0 31 CGTCAAG 20 7.032733E-4 45.0 22 ATACCGG 20 7.032733E-4 45.0 2 ACCTTCG 20 7.032733E-4 45.0 34 CGGTCTA 155 0.0 43.54839 31 CGTTTTT 2675 0.0 40.8785 1 CGTTAGG 95 0.0 40.263157 2 TTCGAAT 45 1.927765E-8 40.0 23 TAGTACG 45 1.927765E-8 40.0 1 TCACGAC 170 0.0 39.705883 25 >>END_MODULE