##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547044_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1143440 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46982264045337 31.0 31.0 33.0 30.0 34.0 2 31.865051948506263 31.0 31.0 34.0 30.0 34.0 3 31.972508395718183 33.0 31.0 34.0 30.0 34.0 4 35.68701986986637 37.0 35.0 37.0 33.0 37.0 5 35.581159483663335 37.0 35.0 37.0 33.0 37.0 6 35.66153799062478 37.0 35.0 37.0 33.0 37.0 7 36.02565154271321 37.0 35.0 37.0 35.0 37.0 8 36.030459840481356 37.0 35.0 37.0 35.0 37.0 9 37.8225582452949 39.0 38.0 39.0 35.0 39.0 10 37.268116385643324 39.0 37.0 39.0 34.0 39.0 11 36.863296718673475 39.0 35.0 39.0 33.0 39.0 12 35.65678916252711 37.0 35.0 39.0 32.0 39.0 13 35.09319946827118 37.0 35.0 39.0 30.0 39.0 14 35.96995644721192 37.0 35.0 41.0 30.0 41.0 15 36.41878629399007 38.0 35.0 41.0 31.0 41.0 16 36.66065119289163 37.0 35.0 41.0 32.0 41.0 17 36.63751224375569 37.0 35.0 41.0 32.0 41.0 18 36.59849139438886 37.0 35.0 40.0 32.0 41.0 19 36.54915255719583 37.0 35.0 40.0 32.0 41.0 20 36.336177674386064 36.0 35.0 40.0 32.0 41.0 21 36.160441299937034 36.0 35.0 40.0 31.0 41.0 22 36.030637374938784 36.0 35.0 40.0 31.0 41.0 23 36.08912492129014 36.0 35.0 40.0 31.0 41.0 24 36.00650143426852 35.0 35.0 40.0 31.0 41.0 25 35.95820593997062 35.0 35.0 40.0 31.0 41.0 26 35.81759515147275 35.0 35.0 40.0 31.0 41.0 27 35.74791768697964 35.0 35.0 40.0 31.0 41.0 28 35.78478101168404 36.0 35.0 40.0 31.0 41.0 29 35.884471419576016 36.0 35.0 40.0 31.0 41.0 30 35.89721192191982 36.0 35.0 40.0 31.0 41.0 31 35.72970859861471 36.0 35.0 40.0 31.0 41.0 32 35.543312285734274 35.0 34.0 40.0 30.0 41.0 33 35.45963583572378 35.0 34.0 40.0 30.0 41.0 34 35.41122577485483 35.0 34.0 40.0 30.0 41.0 35 35.34266074302106 35.0 34.0 40.0 30.0 41.0 36 35.192617015322185 35.0 34.0 40.0 29.0 41.0 37 35.12627509969915 35.0 34.0 40.0 29.0 41.0 38 35.14505177359547 35.0 34.0 40.0 29.0 41.0 39 35.1483812005877 36.0 34.0 40.0 29.0 41.0 40 34.98691579794305 35.0 34.0 40.0 29.0 41.0 41 35.03578062688029 35.0 34.0 40.0 29.0 41.0 42 34.967248828097674 35.0 34.0 40.0 29.0 41.0 43 34.861598334849226 35.0 34.0 40.0 28.0 41.0 44 34.72342930105646 35.0 34.0 40.0 27.0 41.0 45 34.65011369201707 35.0 34.0 40.0 27.0 41.0 46 34.64768330651368 35.0 34.0 40.0 27.0 41.0 47 34.62948996012034 35.0 34.0 40.0 27.0 41.0 48 34.603341670747916 35.0 34.0 40.0 27.0 41.0 49 34.60176659903449 35.0 34.0 40.0 27.0 41.0 50 34.459195060519136 35.0 34.0 40.0 27.0 41.0 51 34.07016371650458 35.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 0.0 13 4.0 14 14.0 15 25.0 16 70.0 17 179.0 18 404.0 19 837.0 20 1494.0 21 2428.0 22 3770.0 23 5566.0 24 8242.0 25 11857.0 26 15927.0 27 19370.0 28 21457.0 29 24308.0 30 29049.0 31 35524.0 32 45326.0 33 60956.0 34 119504.0 35 228699.0 36 61484.0 37 76718.0 38 118529.0 39 251340.0 40 355.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.42825159168824 22.943923598964528 30.447071993283426 13.180752816063807 2 30.246711677044708 26.697071993283426 29.92846148464283 13.127754845029035 3 30.37911914923389 24.86007136360456 31.87390680752816 12.886902679633385 4 28.094784160078362 27.65453368781921 30.182869236689285 14.067812915413139 5 24.140925627929754 32.8557685580354 28.80439725739873 14.198908556636116 6 22.744437836703284 41.944658224305606 25.325508990414892 9.985394948576227 7 86.95733925697894 5.106345763660533 6.260232281536417 1.67608269782411 8 88.48964528090674 3.8777723361085847 5.667547051003988 1.96503533198069 9 84.64764220247673 6.06809277268593 7.0299272371090735 2.2543377877282587 10 57.5059469670468 24.194710697544252 10.677079689358427 7.622262646050514 11 54.33306513678025 17.60459665570559 16.928041698733644 11.134296508780523 12 47.61535366962849 21.767123766878893 19.467921360106345 11.149601203386272 13 21.28734345483803 45.30075911285245 20.87026866298188 12.541628769327643 14 13.183901210382704 48.03409011404184 25.94084516896383 12.841163506611627 15 12.394616245714687 24.970352620163716 51.2238508360736 11.411180298047995 16 14.464073322605472 18.84593857132862 50.40264465122788 16.287343454838034 17 14.511998880570909 20.147449800601695 27.761666550059473 37.57888476876793 18 21.77700622682432 25.086318477576437 34.91027076191143 18.22640453368782 19 31.515514587560347 24.869429091163507 25.126810326733366 18.488245994542783 20 34.29554677114672 23.814017351150913 24.3941964598055 17.496239417896874 21 22.35849716644511 30.315451619673965 26.75960260267264 20.566448611208283 22 21.279559924438537 25.01101938011614 25.590498845588748 28.11892184985657 23 18.766441614776465 31.30807038410411 25.154883509410205 24.77060449170923 24 19.003183376478 23.860018890365915 41.07762541104037 16.05917232211572 25 15.218900860561114 26.810501644161477 37.993160987896175 19.977436507381235 26 14.951374798852585 39.90703491219478 26.477034212551597 18.664556076401034 27 16.29818792415868 38.62546351360806 29.911407682082135 15.164940880151123 28 13.024644931085147 30.906650108444694 41.593349891555306 14.475355068914853 29 13.79538935143077 26.185108094871616 39.62551598684671 20.393986566850906 30 17.942174491009585 33.603162387182536 31.71106485692297 16.74359826488491 31 32.73822850346323 27.39540334429441 23.890803190372907 15.975564961869445 32 31.868572028265586 28.794864619044287 25.563212761491638 13.773350591198488 33 28.766179248583224 30.42022318617505 22.84116350661163 17.9724340586301 34 18.901822570489053 30.071013782970685 27.005702091933117 24.02146155460715 35 19.883159588609807 25.91320926327573 31.681942209473167 22.521688938641294 36 31.550059469670465 25.568022808367736 26.737826208633596 16.144091513328203 37 19.358164835933675 35.60982648849087 28.98254390260967 16.049464772965788 38 18.826436017631007 36.62684530889246 21.908101868047297 22.638616805429233 39 20.886622822360597 33.463758483173585 27.09753025956762 18.552088434898202 40 25.09690058070384 27.59270272161198 25.052473238648286 22.25792345903589 41 16.66410130833275 25.013992863639544 27.69143986566851 30.6304659623592 42 21.82292031064157 24.806985937172044 23.972661442664243 29.39743230952214 43 22.79542433358987 24.284439935632825 25.70795144476317 27.212184286014136 44 17.44297908066886 32.08030154621143 30.0230007696075 20.453718603512208 45 16.13490869656475 42.10041628769328 22.26107185335479 19.503603162387183 46 22.460120338627302 35.68661232771287 23.933831246064507 17.919436087595326 47 21.882389981109636 29.09990904638634 24.97752396277898 24.04017700972504 48 21.886675295599247 25.036643811656056 32.122455047925556 20.954225844819142 49 20.223186175050724 25.111243265934373 33.2545651717624 21.4110053872525 50 17.867312670538027 36.02235359966417 27.276289092562795 18.83404463723501 51 17.888739242986077 36.96897082487931 23.682746799132442 21.459543133002168 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1491.0 1 1861.0 2 2231.0 3 4993.0 4 7755.0 5 5860.5 6 3966.0 7 4145.5 8 4325.0 9 4628.0 10 4931.0 11 4832.5 12 4734.0 13 4562.5 14 4391.0 15 4039.5 16 3688.0 17 3746.0 18 3804.0 19 3383.0 20 2962.0 21 3836.0 22 4710.0 23 4672.5 24 4635.0 25 6479.0 26 10264.5 27 12206.0 28 16176.0 29 20146.0 30 19847.0 31 19548.0 32 23851.0 33 28154.0 34 27666.5 35 27179.0 36 31057.0 37 34935.0 38 39568.0 39 44201.0 40 66936.0 41 89671.0 42 112672.5 43 135674.0 44 138800.0 45 141926.0 46 131503.0 47 121080.0 48 105792.0 49 90504.0 50 83699.0 51 76894.0 52 66283.0 53 55672.0 54 51086.0 55 46500.0 56 40545.5 57 34591.0 58 32311.5 59 30032.0 60 27555.0 61 25078.0 62 21682.5 63 18287.0 64 15026.5 65 11766.0 66 9072.0 67 6378.0 68 5215.0 69 4052.0 70 3401.5 71 2751.0 72 2550.5 73 2350.0 74 1720.5 75 767.5 76 444.0 77 318.0 78 192.0 79 136.5 80 81.0 81 75.0 82 69.0 83 51.5 84 34.0 85 19.0 86 4.0 87 3.0 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1143440.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.630922561982292 #Duplication Level Percentage of deduplicated Percentage of total 1 81.5339298673733 13.559844737983804 2 8.148776507157875 2.7104334213088626 3 2.482916471593768 1.2387957470083877 4 1.1050241527350513 0.7351028445302692 5 0.6551809269856044 0.544813163039268 6 0.41058313558531956 0.40970257999051957 7 0.30379929640118264 0.3536723800982942 8 0.21814897156221458 0.29024149224218143 9 0.17913630464618985 0.2681281809549406 >10 2.0346901136204143 8.43114018376267 >50 1.128770341046449 13.884600090728295 >100 1.7783956733466313 54.28420065404288 >500 0.01641270195705435 1.6683920305864717 >1k 0.004235535988917251 1.6209324937231557 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4420 0.38655285804239836 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2757 0.24111453158888965 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2534 0.22161197789127546 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2279 0.19931085146575248 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 2140 0.18715455117889876 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1683 0.1471874344084517 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1452 0.1269852375288603 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1144 0.10004897502273839 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05938221507031414 0.0 2 0.0 0.0 0.0 0.2011474148184426 0.0 3 0.0 0.0 0.0 0.2795949065976352 0.0 4 0.0 0.0 0.0 0.45817882879731336 0.0 5 0.0 0.0 0.0 0.7686454907996921 0.0 6 0.0 0.0 0.0 1.0564612047855593 0.0 7 0.0 0.0 0.0 1.2195655215839922 0.0 8 0.0 0.0 0.0 1.5672007276289093 0.0 9 0.0 0.0 0.0 1.6602532708318758 0.0 10 0.0 0.0 0.0 1.8305289302455747 0.0 11 0.0 0.0 0.0 2.0834499405303295 0.0 12 0.0 0.0 0.0 2.3057615616035823 0.0 13 0.0 0.0 0.0 2.386045616735465 0.0 14 0.0 0.0 0.0 2.41962848947037 0.0 15 0.0 0.0 0.0 2.474812845448821 0.0 16 0.0 0.0 0.0 2.6042468341146017 0.0 17 0.0 0.0 0.0 2.7528335548870078 0.0 18 0.0 0.0 0.0 2.9712971384593856 0.0 19 0.0 0.0 0.0 3.075369061778493 0.0 20 0.0 0.0 0.0 3.182851745609739 0.0 21 0.0 0.0 0.0 3.33712306723571 0.0 22 0.0 0.0 0.0 3.4918316658504165 0.0 23 0.0 0.0 0.0 3.6593962079339537 0.0 24 0.0 0.0 0.0 3.788305464213251 0.0 25 0.0 0.0 0.0 3.899286363954383 0.0 26 0.0 0.0 0.0 4.007206324774365 0.0 27 0.0 0.0 0.0 4.099821590988596 0.0 28 0.0 0.0 0.0 4.218586021129224 0.0 29 0.0 0.0 0.0 4.330179108654586 0.0 30 0.0 0.0 0.0 4.486461904428741 0.0 31 0.0 0.0 0.0 4.643706709578115 0.0 32 0.0 0.0 0.0 4.7730532428461485 0.0 33 0.0 0.0 0.0 4.908871475547471 0.0 34 0.0 0.0 0.0 5.041803680123137 0.0 35 0.0 0.0 0.0 5.238753235849717 0.0 36 0.0 0.0 0.0 5.404656125376058 0.0 37 0.0 0.0 0.0 5.55245574756874 0.0 38 0.0 0.0 0.0 5.694570768907857 0.0 39 0.0 0.0 0.0 5.840708738543343 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGGCA 30 2.1654923E-6 45.000004 26 GGTGTAT 60 0.0 45.000004 38 TTTCGAT 30 2.1654923E-6 45.000004 37 GACAATC 30 2.1654923E-6 45.000004 33 TAGCGAT 30 2.1654923E-6 45.000004 38 TAACGTT 30 2.1654923E-6 45.000004 28 CCGTATT 60 0.0 45.000004 26 TAACCGT 30 2.1654923E-6 45.000004 42 CCATCGG 30 2.1654923E-6 45.000004 42 GTTCGCG 30 2.1654923E-6 45.000004 1 CTACGTC 30 2.1654923E-6 45.000004 30 AGCGATC 30 2.1654923E-6 45.000004 39 GCGATAT 30 2.1654923E-6 45.000004 9 CATCGGT 30 2.1654923E-6 45.000004 43 ACGTATG 30 2.1654923E-6 45.000004 1 CGGTCTA 125 0.0 45.000004 31 ATCGGTC 30 2.1654923E-6 45.000004 44 CGACTTG 30 2.1654923E-6 45.000004 19 CGCAATA 30 2.1654923E-6 45.000004 25 ACTCAAT 30 2.1654923E-6 45.000004 10 >>END_MODULE