SRR1547043_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547043_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	972111
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3405	0.35026864216123466	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGAATA	30	2.165154E-6	45.000004	39
TAACGTA	30	2.165154E-6	45.000004	33
TCGATAG	30	2.165154E-6	45.000004	1
ATCGGTT	30	2.165154E-6	45.000004	23
TCGGTTC	30	2.165154E-6	45.000004	24
ATCGCTA	30	2.165154E-6	45.000004	24
AACCGGT	20	7.03275E-4	45.0	11
AATCCGG	40	6.8139343E-9	45.0	2
GGTACCC	20	7.03275E-4	45.0	43
CGTATCA	20	7.03275E-4	45.0	45
GCGCGAA	20	7.03275E-4	45.0	18
ACCGCGA	25	3.89036E-5	45.0	18
CGTTGAA	25	3.89036E-5	45.0	15
GGTCCGT	20	7.03275E-4	45.0	9
TAAACCG	20	7.03275E-4	45.0	31
TACGGCA	20	7.03275E-4	45.0	19
ACGGGTC	35	1.2116652E-7	45.0	5
TATCTCG	25	3.89036E-5	45.0	32
CGTAGCA	25	3.89036E-5	45.0	16
CGTAGAC	20	7.03275E-4	45.0	20