##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547042_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1299727 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.44377473115508 31.0 31.0 33.0 30.0 34.0 2 31.848094253639417 31.0 31.0 34.0 30.0 34.0 3 31.956514714243838 33.0 31.0 34.0 30.0 34.0 4 35.69429426333376 37.0 35.0 37.0 33.0 37.0 5 35.587768816066756 37.0 35.0 37.0 33.0 37.0 6 35.65066740938674 37.0 35.0 37.0 33.0 37.0 7 36.030251737480256 37.0 35.0 37.0 35.0 37.0 8 36.03377632379723 37.0 35.0 37.0 35.0 37.0 9 37.835791670096874 39.0 38.0 39.0 35.0 39.0 10 37.22727157318422 39.0 37.0 39.0 34.0 39.0 11 36.86422302529685 39.0 35.0 39.0 33.0 39.0 12 35.87428052198654 37.0 35.0 39.0 32.0 39.0 13 35.432975540248066 37.0 35.0 39.0 30.0 39.0 14 36.26315834017451 38.0 35.0 41.0 30.0 41.0 15 36.64494466914975 38.0 35.0 41.0 31.0 41.0 16 36.84995310553678 38.0 35.0 41.0 32.0 41.0 17 36.802447744795636 38.0 35.0 41.0 32.0 41.0 18 36.73338554942692 38.0 35.0 40.0 32.0 41.0 19 36.688259919198416 38.0 35.0 40.0 32.0 41.0 20 36.496288836040186 37.0 35.0 40.0 31.0 41.0 21 36.36620305648802 37.0 35.0 40.0 31.0 41.0 22 36.29228291787429 37.0 35.0 40.0 31.0 41.0 23 36.31877617376572 37.0 35.0 40.0 31.0 41.0 24 36.23301508701443 37.0 35.0 40.0 31.0 41.0 25 36.18747167674442 37.0 35.0 40.0 31.0 41.0 26 36.041849557637875 37.0 35.0 40.0 31.0 41.0 27 35.95512903863658 36.0 35.0 40.0 31.0 41.0 28 35.93737915731534 36.0 35.0 40.0 31.0 41.0 29 36.002758271544714 36.0 35.0 40.0 31.0 41.0 30 35.979080991623626 36.0 35.0 40.0 30.0 41.0 31 35.817957925010404 36.0 35.0 40.0 30.0 41.0 32 35.67340218368934 36.0 34.0 40.0 30.0 41.0 33 35.55386554253316 36.0 34.0 40.0 30.0 41.0 34 35.478972891999625 36.0 34.0 40.0 29.0 41.0 35 35.403596293683215 36.0 34.0 40.0 29.0 41.0 36 35.32165216233871 36.0 34.0 40.0 29.0 41.0 37 35.27728823052841 36.0 34.0 40.0 29.0 41.0 38 35.25313315796317 36.0 34.0 40.0 29.0 41.0 39 35.21301088613224 36.0 34.0 40.0 29.0 41.0 40 35.06957922702229 36.0 34.0 40.0 28.0 41.0 41 35.07847109431442 36.0 34.0 40.0 28.0 41.0 42 35.058060654275856 36.0 34.0 40.0 28.0 41.0 43 34.944100568811756 36.0 34.0 40.0 27.0 41.0 44 34.82555105802988 35.0 34.0 40.0 27.0 41.0 45 34.709518998989786 35.0 34.0 40.0 27.0 41.0 46 34.72625482120476 35.0 34.0 40.0 27.0 41.0 47 34.714092267068395 35.0 34.0 40.0 27.0 41.0 48 34.66375477311774 35.0 34.0 40.0 27.0 41.0 49 34.63008077850195 36.0 34.0 40.0 27.0 41.0 50 34.51514356476399 35.0 34.0 40.0 27.0 41.0 51 34.15407851033332 35.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 2.0 12 9.0 13 13.0 14 15.0 15 42.0 16 89.0 17 232.0 18 527.0 19 1000.0 20 1723.0 21 2754.0 22 4233.0 23 6368.0 24 9402.0 25 13557.0 26 18185.0 27 22006.0 28 24407.0 29 27733.0 30 33216.0 31 40340.0 32 51017.0 33 68145.0 34 129226.0 35 216280.0 36 80340.0 37 99530.0 38 151596.0 39 297479.0 40 259.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.64152625897592 23.56679518083413 29.869426425703242 12.922252134486703 2 31.70019550259401 24.39743115284979 30.504482864478465 13.39789048007774 3 28.723185715154028 24.30648897807001 33.11079942172472 13.859525885051246 4 26.82270969211227 26.868026901033833 31.427984492127965 14.881278914725938 5 24.095829354933766 30.899411953433297 30.723605803372557 14.281152888260381 6 22.163115792778022 39.27863312834157 27.33589438397448 11.22235669490593 7 87.49091155296458 4.17680020496612 6.643010416802913 1.6892778252663827 8 89.20157848532807 2.5162976532764185 6.31132537832945 1.9707984830660594 9 85.47925833655837 4.598350268941093 7.572513304717067 2.34987808978347 10 54.12859777476346 23.118624141839017 12.665967545492245 10.086810537905269 11 47.40487810132436 20.038900476792435 19.498171539100134 13.058049882783077 12 42.69342715816475 20.20047286853316 22.93720142768443 14.168898545617656 13 24.64656039306716 36.350402815360454 23.61288178209732 15.390155009475068 14 15.645131631488768 38.35674722460948 30.042924398739117 15.95519674516264 15 15.263359151575678 24.55284840585754 46.15738535861762 14.026407083949168 16 19.307208359909428 20.360660354058968 44.03347779956868 16.29865348646293 17 19.325904593810854 20.09268100147185 28.306098126760464 32.27531627795683 18 24.306412038835848 23.214336549136856 33.46664337972513 19.01260803230217 19 30.314673773800187 25.83157847763415 25.157975482543645 18.69577226602202 20 32.82081544816719 25.448728848442787 24.897920871075232 16.832534832314785 21 25.753023519554493 26.90834305973485 28.041119404305675 19.297514016404985 22 22.2813713956854 22.412014215292903 29.353087225240376 25.953527163781313 23 20.62386947412803 27.434222725233838 28.728263704608736 23.213644096029398 24 21.56360528018576 22.758394647491357 37.5966645303206 18.081335542002282 25 19.69252004459398 24.128682407921048 34.82569801196713 21.353099535517845 26 16.392673230609198 34.85747391567614 27.837999826117333 20.911853027597335 27 16.8363817940229 33.53750441438856 31.157850840984295 18.46826295060424 28 15.294750359113877 28.623318589211426 38.55825107888041 17.523679972794287 29 17.790274419166487 25.982379376592164 36.72071134938337 19.50663485485798 30 20.87715343299016 28.9600816171396 32.76241856943805 17.4003463804322 31 31.36397104930497 25.17913377193826 26.21435116759135 17.24254401116542 32 31.915779236716634 25.759255597521637 26.91819128170762 15.406773884054111 33 29.106573918984523 26.453016671962647 26.026619436235453 18.41378997281737 34 20.41713375193406 27.2647255923744 29.383785979671117 22.934354676020426 35 19.490939251088882 27.24564466230216 31.705042674346227 21.55837341226273 36 29.925207370470876 25.650078824245398 26.633362236838963 17.791351568444757 37 21.088582448468024 33.38162552597584 27.443763190269955 18.08602883528618 38 20.757743741570344 33.92012322587743 23.67312520244636 21.64900783010586 39 21.62777260147708 29.858577993686364 27.832383262023484 20.68126614281307 40 25.464424452211887 24.488142509927087 26.987359653219485 23.060073384641544 41 17.59307916200864 24.844063407161656 28.193689905649418 29.36916752518029 42 22.961360347211375 23.79138080535374 25.801956872481686 27.4453019749532 43 21.919833934356983 24.624171075925943 26.72922852260513 26.72676646711194 44 20.07059944126728 28.676714417720028 29.22613748887266 22.026548652140026 45 19.15240662077498 34.84624078748845 24.045511095791657 21.955841495944917 46 22.71030762613995 31.2768758362333 26.46009508150558 19.55272145612117 47 20.82014146047593 27.733054710720022 27.246798750814595 24.200005077989456 48 21.89298214163436 24.704957271796307 32.49574718383168 20.906313402737652 49 21.714252300675447 23.973419033381628 32.254234927796375 22.05809373814655 50 19.58665165838672 31.286647118971906 28.392885582895484 20.733815639745885 51 18.901430838937717 32.36110352404774 26.21527443840129 22.522191198613246 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1475.0 1 2191.0 2 2907.0 3 7035.0 4 11163.0 5 7952.5 6 4742.0 7 4841.5 8 4941.0 9 5067.0 10 5193.0 11 5197.0 12 5201.0 13 4976.5 14 4752.0 15 4506.5 16 4261.0 17 3977.5 18 3694.0 19 3935.5 20 4177.0 21 4292.5 22 4408.0 23 4771.5 24 5135.0 25 6080.5 26 8192.0 27 9358.0 28 11094.0 29 12830.0 30 16753.0 31 20676.0 32 22754.5 33 24833.0 34 27817.5 35 30802.0 36 33407.5 37 36013.0 38 43533.5 39 51054.0 40 70773.0 41 90492.0 42 110882.5 43 131273.0 44 130625.0 45 129977.0 46 124337.0 47 118697.0 48 114683.0 49 110669.0 50 102079.5 51 93490.0 52 83731.0 53 73972.0 54 70850.0 55 67728.0 56 61048.5 57 54369.0 58 51727.0 59 49085.0 60 45185.5 61 41286.0 62 35914.5 63 30543.0 64 26269.5 65 21996.0 66 16986.5 67 11977.0 68 10112.5 69 8248.0 70 6510.5 71 4773.0 72 3837.5 73 2902.0 74 2255.5 75 1212.0 76 815.0 77 732.5 78 650.0 79 482.5 80 315.0 81 222.0 82 129.0 83 93.0 84 57.0 85 37.5 86 18.0 87 13.0 88 8.0 89 8.0 90 8.0 91 4.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1299727.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.767572329501206 #Duplication Level Percentage of deduplicated Percentage of total 1 80.77487638895697 15.15948335036269 2 7.84072019320749 2.943025666828045 3 2.450428847885272 1.379658019229494 4 1.1881994770692774 0.8919847851109269 5 0.6939099559071739 0.6511502643824438 6 0.4814546623747147 0.5421441119695825 7 0.35783330011630177 0.4700963639285763 8 0.2846750569215028 0.4274127776943341 9 0.22231415321840994 0.37550672553584896 >10 2.9811251146665305 13.76561114450264 >50 1.325570222369596 18.079495793187235 >100 1.391478002073743 43.80274911209709 >500 0.005355007112776393 0.6690239866150516 >1k 0.0016476944962388902 0.37471218663313555 >5k 4.1192362405972254E-4 0.46794571192291506 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6053 0.46571318438410525 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1432 0.11017698332034342 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.6939234162251E-5 0.0 0.0 0.05708891174839024 0.0 2 7.6939234162251E-5 0.0 0.0 0.19196338923481623 0.0 3 7.6939234162251E-5 0.0 0.0 0.27728899992075257 0.0 4 7.6939234162251E-5 0.0 0.0 0.43455279454839363 0.0 5 7.6939234162251E-5 0.0 0.0 0.7386935871917718 0.0 6 7.6939234162251E-5 0.0 0.0 0.9998253479384517 0.0 7 7.6939234162251E-5 0.0 0.0 1.16793757458297 0.0 8 7.6939234162251E-5 0.0 0.0 1.5154720952938578 0.0 9 7.6939234162251E-5 0.0 0.0 1.6164933097488934 0.0 10 7.6939234162251E-5 0.0 0.0 1.8123805999259845 0.0 11 7.6939234162251E-5 0.0 0.0 2.128523913098674 0.0 12 7.6939234162251E-5 0.0 0.0 2.3611112179711586 0.0 13 7.6939234162251E-5 0.0 0.0 2.461439979318734 0.0 14 7.6939234162251E-5 0.0 0.0 2.5029871657663496 0.0 15 7.6939234162251E-5 0.0 0.0 2.5642307961595012 0.0 16 7.6939234162251E-5 0.0 0.0 2.710107584131129 0.0 17 7.6939234162251E-5 0.0 0.0 2.8757577552824554 0.0 18 7.6939234162251E-5 0.0 0.0 3.0922647602150297 0.0 19 7.6939234162251E-5 0.0 0.0 3.2129824186156015 0.0 20 7.6939234162251E-5 0.0 0.0 3.3438560559255905 0.0 21 7.6939234162251E-5 0.0 0.0 3.5284332786808306 0.0 22 7.6939234162251E-5 0.0 0.0 3.722243209535541 0.0 23 7.6939234162251E-5 0.0 0.0 3.9146682341753305 0.0 24 7.6939234162251E-5 0.0 0.0 4.05477457958479 0.0 25 7.6939234162251E-5 0.0 0.0 4.1792622604593115 0.0 26 7.6939234162251E-5 0.0 0.0 4.305596482953728 0.0 27 7.6939234162251E-5 0.0 0.0 4.440086264269342 0.0 28 7.6939234162251E-5 0.0 0.0 4.581962212064534 0.0 29 7.6939234162251E-5 0.0 0.0 4.748535654025807 0.0 30 7.6939234162251E-5 0.0 0.0 4.9426533418171665 0.0 31 7.6939234162251E-5 0.0 0.0 5.1250762660158635 0.0 32 7.6939234162251E-5 0.0 0.0 5.28834132090816 0.0 33 7.6939234162251E-5 0.0 0.0 5.45960805615333 0.0 34 7.6939234162251E-5 0.0 0.0 5.636106659321534 0.0 35 7.6939234162251E-5 0.0 0.0 5.863692913973473 0.0 36 7.6939234162251E-5 0.0 0.0 6.053117308480934 0.0 37 7.6939234162251E-5 0.0 0.0 6.232770420249791 0.0 38 7.6939234162251E-5 0.0 0.0 6.471743681557743 0.0 39 1.53878468324502E-4 0.0 0.0 6.855978216964024 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 25 3.8910875E-5 45.000004 1 AGCCGAA 25 3.8910875E-5 45.000004 42 GCCTTCG 25 3.8910875E-5 45.000004 9 ACACGGC 30 2.1657215E-6 45.000004 27 ACGCCGT 25 3.8910875E-5 45.000004 43 GTCGATA 30 2.1657215E-6 45.000004 16 CGTATCC 35 1.2120836E-7 45.000004 12 CGAGTAC 25 3.8910875E-5 45.000004 20 TTTCGCG 50 2.1827873E-11 45.000004 1 ATCAGTC 30 2.1657215E-6 45.000004 13 CGTGAAT 25 3.8910875E-5 45.000004 35 TTATCGG 35 1.2120836E-7 45.000004 1 TCGATAC 30 2.1657215E-6 45.000004 17 GACCCGT 30 2.1657215E-6 45.000004 22 CGTTAGA 30 2.1657215E-6 45.000004 20 ACGATTT 35 1.2120836E-7 45.000004 17 AGACGAT 30 2.1657215E-6 45.000004 39 CTACGTA 25 3.8910875E-5 45.000004 42 TATTCGA 25 3.8910875E-5 45.000004 36 TATTACG 70 0.0 45.000004 1 >>END_MODULE