SRR1547041_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547041_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1495123
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5042	0.3372297797572507	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGATA	25	3.8913702E-5	45.000004	11
TCGATCA	50	2.1827873E-11	45.000004	17
CTAACCG	25	3.8913702E-5	45.000004	18
TTAAGCG	25	3.8913702E-5	45.000004	1
TACAGCG	65	0.0	45.000004	1
CGAACTA	40	6.8175723E-9	45.0	33
CCGATTA	20	7.033968E-4	45.0	10
ACCGCTA	20	7.033968E-4	45.0	17
CTACGCG	35	1.2122655E-7	45.0	1
CATACGT	20	7.033968E-4	45.0	11
CGCAATA	20	7.033968E-4	45.0	14
TATCGCG	75	0.0	45.0	1
TACGTTC	20	7.033968E-4	45.0	31
ATCGATA	20	7.033968E-4	45.0	36
GTTTACG	55	1.8189894E-12	44.999996	1
CGGTCTA	380	0.0	44.407894	31
CGACGGT	390	0.0	43.846153	28
GCGATAT	135	0.0	43.333336	9
AATAGCG	135	0.0	43.333336	1
TCACGAC	415	0.0	42.831326	25