##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547039_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1209159 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42119109232119 31.0 31.0 33.0 30.0 34.0 2 31.826251138187782 31.0 31.0 34.0 30.0 34.0 3 31.94230452736158 33.0 31.0 34.0 30.0 34.0 4 35.666015801065036 37.0 35.0 37.0 33.0 37.0 5 35.55084649744161 37.0 35.0 37.0 33.0 37.0 6 35.62177678866055 37.0 35.0 37.0 33.0 37.0 7 36.01312730583819 37.0 35.0 37.0 35.0 37.0 8 36.02378181860285 37.0 35.0 37.0 35.0 37.0 9 37.86570996866417 39.0 38.0 39.0 35.0 39.0 10 37.24658543665473 39.0 37.0 39.0 34.0 39.0 11 36.86140118876012 39.0 35.0 39.0 33.0 39.0 12 35.724279437195605 37.0 35.0 39.0 32.0 39.0 13 35.17466602820638 37.0 35.0 39.0 30.0 39.0 14 35.8703412867952 38.0 35.0 41.0 27.0 41.0 15 36.38145934488351 38.0 35.0 41.0 31.0 41.0 16 36.61820240348871 38.0 35.0 41.0 32.0 41.0 17 36.61766483977707 38.0 35.0 41.0 32.0 41.0 18 36.57577043217641 37.0 35.0 40.0 32.0 41.0 19 36.51655324072351 37.0 35.0 40.0 31.0 41.0 20 36.313913223984606 37.0 35.0 40.0 31.0 41.0 21 36.17025717874986 37.0 35.0 40.0 31.0 41.0 22 36.10974983438903 36.0 35.0 40.0 31.0 41.0 23 36.16666377209283 36.0 35.0 40.0 31.0 41.0 24 36.07256283086013 36.0 35.0 40.0 31.0 41.0 25 35.98848621231782 36.0 35.0 40.0 31.0 41.0 26 35.85789958144463 36.0 35.0 40.0 31.0 41.0 27 35.82585664912555 36.0 34.0 40.0 30.0 41.0 28 35.82224670204663 36.0 35.0 40.0 30.0 41.0 29 35.90685344111072 36.0 35.0 40.0 31.0 41.0 30 35.89815235217205 36.0 35.0 40.0 31.0 41.0 31 35.70599482781007 36.0 34.0 40.0 30.0 41.0 32 35.60357570840559 36.0 34.0 40.0 30.0 41.0 33 35.52338857007226 36.0 34.0 40.0 30.0 41.0 34 35.42614825676358 36.0 34.0 40.0 30.0 41.0 35 35.370294560103346 36.0 34.0 40.0 29.0 41.0 36 35.24331870333017 36.0 34.0 40.0 29.0 41.0 37 35.19581874674877 36.0 34.0 40.0 29.0 41.0 38 35.16018819692034 35.0 34.0 40.0 29.0 41.0 39 35.14448637441395 36.0 34.0 40.0 29.0 41.0 40 34.962638495020094 36.0 34.0 40.0 27.0 41.0 41 34.94296614423744 36.0 34.0 40.0 27.0 41.0 42 34.927694372700365 36.0 34.0 40.0 27.0 41.0 43 34.83301782478566 35.0 34.0 40.0 27.0 41.0 44 34.74874024011731 35.0 34.0 40.0 27.0 41.0 45 34.6522401106885 35.0 34.0 40.0 27.0 41.0 46 34.67832187495606 35.0 34.0 40.0 27.0 41.0 47 34.65165540677446 35.0 34.0 40.0 27.0 41.0 48 34.6249508956225 35.0 34.0 40.0 27.0 41.0 49 34.614939805269614 35.0 34.0 40.0 27.0 41.0 50 34.47474649735891 35.0 34.0 40.0 27.0 41.0 51 34.1037903203797 35.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 3.0 12 8.0 13 7.0 14 12.0 15 31.0 16 104.0 17 244.0 18 525.0 19 1038.0 20 1734.0 21 2871.0 22 4395.0 23 6242.0 24 8922.0 25 12806.0 26 17096.0 27 20392.0 28 22981.0 29 25993.0 30 30933.0 31 38194.0 32 49146.0 33 66007.0 34 125440.0 35 214173.0 36 70036.0 37 87955.0 38 136873.0 39 264778.0 40 217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.19444258364698 24.05175828819866 30.49921474347046 13.254584384683902 2 30.01755765784318 25.634842067916626 31.514713945808616 12.832886328431577 3 29.530359530880556 25.371601253433173 32.26250641975125 12.835532795935025 4 27.34412926670521 26.73924603794869 31.279178338001866 14.637446357344237 5 23.792073664422958 31.73387453593779 30.196111512216344 14.277940287422911 6 21.513713250283875 40.727728942182125 27.006704660015764 10.751853147518235 7 89.31736851811878 3.7561644084855668 5.704295299460203 1.2221717739354379 8 91.11704912257197 2.265541587169264 5.228840872044123 1.3885684182146434 9 88.59868718671407 3.3274366729272162 6.04734364959447 2.026532490764242 10 55.92250481533032 21.99727248442926 11.637840846406469 10.442381853833945 11 50.493855646775984 18.785039850011454 18.392039425749633 12.32906507746293 12 45.04064395170528 19.949320147308995 21.662577047352745 13.347458853632979 13 23.72864114644972 39.03308001677199 23.246157039727613 13.992121797050677 14 14.831796314628598 42.191142769478624 28.676708356800056 14.300352559092724 15 13.623435792976771 24.03190978192281 48.249154991196356 14.09549943390406 16 18.995930229192357 19.00742582241045 45.974516171984 16.022127776413193 17 20.031526044134807 18.690676743091686 26.236665318622283 35.04113189415122 18 25.642616066208003 23.10763100634408 33.069100093536086 18.180652833911832 19 31.57723674057754 25.80611813665531 23.81010272429019 18.806542398476957 20 32.57189501132605 25.733588386638978 23.6895230486644 18.004993553370564 21 24.197810213545118 27.214204252707873 29.083106522798076 19.504879010948933 22 22.01257237468356 21.267426368244376 29.488843071920236 27.231158185151827 23 19.42904117655329 27.935283945287594 28.035932412528048 24.59974246563107 24 20.184028734020917 23.601362599955834 38.28330269220177 17.931305973821473 25 19.65597576497384 23.568364458272235 35.58374043446726 21.191919342286663 26 16.457306276511193 35.398653113444965 26.046119658374128 22.097920951669714 27 16.206884288997557 35.06594252699603 31.52703656012154 17.200136623884866 28 14.143135848966098 29.077234673024805 39.56229081535182 17.21733866265727 29 16.21796637166824 26.613208023097044 37.89220441645805 19.276621188776662 30 20.175923927291613 29.856950161227765 32.7500353551518 17.21709055632882 31 32.06732944137206 23.540493847376563 26.233853446899868 18.158323264351502 32 32.40425783540461 25.384171974074544 26.16752635509474 16.044043835426113 33 30.150708054110336 26.124934768711146 24.364868474700184 19.359488702478334 34 19.553590553434248 27.66757721689207 28.592104098799247 24.186728130874435 35 19.677064802891927 27.624241311523136 31.764308912227424 20.934384973357513 36 31.853875296797195 24.0348043557547 27.37390202611898 16.737418321329123 37 20.443630655687134 33.456476774353085 28.65297285137852 17.44691971858126 38 20.982352196857484 34.22213290394398 22.75622974315206 22.039285156046475 39 20.634589826482706 30.42610607868775 26.836255612371907 22.103048482457645 40 25.467783806761556 25.620038390319223 25.52005153995463 23.392126262964588 41 17.964634923943006 23.38476577522063 28.608975329133717 30.04162397170265 42 22.7574702747943 23.29949990034396 25.497804672503783 28.44522515235796 43 22.616215071797836 22.46205833972207 27.495722233387003 27.426004355093088 44 19.889774628481447 28.492944269529485 30.19420936369824 21.423071738290826 45 17.569815053272563 37.95729097662094 22.21750820198171 22.25538576812479 46 23.559432630448104 31.223602520429488 25.71076260442175 19.506202244700653 47 20.41724868276215 27.341648203420725 27.431214587990493 24.80988852582663 48 22.95860180505624 24.753651091378387 32.00712230566865 20.28062479789672 49 22.740929852897757 22.256212789219614 32.73804354927681 22.264813808605815 50 19.661185997871247 31.82550847324463 27.886241594364346 20.627063934519775 51 18.127723483842903 34.965624868193515 25.873272249555267 21.033379398408314 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1185.0 1 1746.0 2 2307.0 3 5384.5 4 8462.0 5 6062.5 6 3663.0 7 3833.5 8 4004.0 9 4341.5 10 4679.0 11 4576.0 12 4473.0 13 4361.0 14 4249.0 15 3831.0 16 3413.0 17 3288.5 18 3164.0 19 3224.0 20 3284.0 21 3286.0 22 3288.0 23 4013.0 24 4738.0 25 4928.0 26 6409.0 27 7700.0 28 9249.0 29 10798.0 30 12412.0 31 14026.0 32 16250.0 33 18474.0 34 21866.0 35 25258.0 36 27552.0 37 29846.0 38 37298.5 39 44751.0 40 64272.0 41 83793.0 42 107849.5 43 131906.0 44 134832.5 45 137759.0 46 129610.5 47 121462.0 48 112781.0 49 104100.0 50 99958.0 51 95816.0 52 84542.5 53 73269.0 54 68632.5 55 63996.0 56 58130.5 57 52265.0 58 49181.5 59 46098.0 60 38363.0 61 30628.0 62 26791.0 63 22954.0 64 19170.0 65 15386.0 66 12052.0 67 8718.0 68 7262.0 69 5806.0 70 4704.5 71 3603.0 72 3151.0 73 2699.0 74 1832.0 75 750.5 76 536.0 77 423.5 78 311.0 79 206.0 80 101.0 81 70.5 82 40.0 83 40.0 84 40.0 85 26.0 86 12.0 87 10.5 88 9.0 89 7.0 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1209159.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.782288431964265 #Duplication Level Percentage of deduplicated Percentage of total 1 80.879980989285 14.382311503232522 2 7.5632396916883895 2.6898341935536685 3 2.3787985311806095 1.269014448089596 4 1.2229121625427875 0.8698470720517205 5 0.7223058855702301 0.6422125796657603 6 0.5288464603343015 0.5642460176332739 7 0.3914171284722237 0.4872204592993005 8 0.31669098734409473 0.4505192384604989 9 0.2516764626661773 0.4027845105599806 >10 2.814771476732659 12.145653392694697 >50 1.3569830450268918 17.65031384253608 >100 1.5611392243324405 46.5586697542643 >500 0.00889671423584774 1.00717623251189 >1k 0.0018729924707047876 0.4440534761893113 >5k 4.682481176761969E-4 0.43614327925738094 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5238 0.43319364947041705 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1403 0.11603105960423733 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1385 0.11454242163354861 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1322 0.10933218873613809 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1223 0.10114467989735014 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6540421896541315E-4 0.0 0.0 0.036388928172390894 0.0 2 1.6540421896541315E-4 0.0 0.0 0.12016616507837266 0.0 3 1.6540421896541315E-4 0.0 0.0 0.17632089741713042 0.0 4 1.6540421896541315E-4 0.0 0.0 0.2868936177955091 0.0 5 1.6540421896541315E-4 0.0 0.0 0.5024980172169251 0.0 6 1.6540421896541315E-4 0.0 0.0 0.6961863576254239 0.0 7 1.6540421896541315E-4 0.0 0.0 0.8148638847331079 0.0 8 1.6540421896541315E-4 0.0 0.0 1.0726463599907043 0.0 9 1.6540421896541315E-4 0.0 0.0 1.1545214483785837 0.0 10 1.6540421896541315E-4 0.0 0.0 1.3211661989862375 0.0 11 1.6540421896541315E-4 0.0 0.0 1.5599271890628115 0.0 12 1.6540421896541315E-4 0.0 0.0 1.7533674231428622 0.0 13 1.6540421896541315E-4 0.0 0.0 1.832017129260916 0.0 14 1.6540421896541315E-4 0.0 0.0 1.8629477182074483 0.0 15 1.6540421896541315E-4 0.0 0.0 1.9113284522548317 0.0 16 1.6540421896541315E-4 0.0 0.0 2.0165255355168346 0.0 17 1.6540421896541315E-4 0.0 0.0 2.138180338565896 0.0 18 1.6540421896541315E-4 0.0 0.0 2.3045769828451013 0.0 19 1.6540421896541315E-4 0.0 0.0 2.4018346635967642 0.0 20 1.6540421896541315E-4 0.0 0.0 2.5153019578070377 0.0 21 1.6540421896541315E-4 0.0 0.0 2.662594414795738 0.0 22 2.481063284481197E-4 0.0 0.0 2.8113755097551274 0.0 23 2.481063284481197E-4 0.0 0.0 2.970328964180889 0.0 24 2.481063284481197E-4 0.0 0.0 3.0833827478437494 0.0 25 2.481063284481197E-4 0.0 0.0 3.185519853054892 0.0 26 3.308084379308263E-4 0.0 0.0 3.2936115101487893 0.0 27 3.308084379308263E-4 0.0 0.0 3.4404077544805935 0.0 28 3.308084379308263E-4 0.0 0.0 3.558175558383968 0.0 29 3.308084379308263E-4 0.0 0.0 3.7273013722761026 0.0 30 3.308084379308263E-4 0.0 0.0 3.9291772215233896 0.0 31 3.308084379308263E-4 0.0 0.0 4.098881950181903 0.0 32 3.308084379308263E-4 0.0 0.0 4.23749068567492 0.0 33 3.308084379308263E-4 0.0 0.0 4.379490207656727 0.0 34 3.308084379308263E-4 0.0 0.0 4.557051636716098 0.0 35 4.1351054741353287E-4 0.0 0.0 4.761325847138383 0.0 36 4.1351054741353287E-4 0.0 0.0 4.906716155608981 0.0 37 4.1351054741353287E-4 0.0 0.0 5.081300308726974 0.0 38 4.1351054741353287E-4 0.0 0.0 5.3740657762957555 0.0 39 4.1351054741353287E-4 0.0 0.0 6.007977445480702 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCAATCG 35 1.2119926E-7 45.000004 24 TCGTCGA 35 1.2119926E-7 45.000004 32 TCCAATC 35 1.2119926E-7 45.000004 23 CGTCGAC 35 1.2119926E-7 45.000004 33 ATACGAG 55 1.8189894E-12 45.000004 1 TCACGAG 20 7.0334325E-4 45.0 1 GCCCCTA 20 7.0334325E-4 45.0 41 CTTAACG 25 3.8909264E-5 45.0 1 ATGGGCG 225 0.0 45.0 5 TAATACG 40 6.8157533E-9 45.0 1 AACCGAT 20 7.0334325E-4 45.0 41 ACGCCGG 45 3.8562575E-10 45.0 27 CCGATTC 25 3.8909264E-5 45.0 21 ACGTTAT 20 7.0334325E-4 45.0 15 CGTGCAA 20 7.0334325E-4 45.0 30 GCGCGAT 25 3.8909264E-5 45.0 11 GAATCGT 20 7.0334325E-4 45.0 16 CACGATA 25 3.8909264E-5 45.0 30 ATATGCG 80 0.0 45.0 1 TGACGTA 40 6.8157533E-9 45.0 44 >>END_MODULE