##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547038_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1073789 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42059287252896 31.0 31.0 33.0 30.0 34.0 2 31.84091101696888 31.0 31.0 34.0 30.0 34.0 3 31.942480319690368 33.0 31.0 34.0 30.0 34.0 4 35.68044746221092 37.0 35.0 37.0 33.0 37.0 5 35.58224660524554 37.0 35.0 37.0 33.0 37.0 6 35.63907248072014 37.0 35.0 37.0 33.0 37.0 7 35.992474312923676 37.0 35.0 37.0 35.0 37.0 8 35.98572810859489 37.0 35.0 37.0 35.0 37.0 9 37.77571012554608 39.0 38.0 39.0 35.0 39.0 10 37.20290392246521 39.0 37.0 39.0 33.0 39.0 11 36.83672118079064 39.0 35.0 39.0 33.0 39.0 12 35.98086216193312 37.0 35.0 39.0 32.0 39.0 13 35.599638290204126 37.0 35.0 39.0 31.0 39.0 14 36.44800235428003 38.0 35.0 41.0 31.0 41.0 15 36.81736542281584 38.0 35.0 41.0 31.0 41.0 16 36.9840545954559 38.0 35.0 41.0 32.0 41.0 17 36.94659285949102 38.0 35.0 41.0 32.0 41.0 18 36.82749031699896 38.0 35.0 41.0 32.0 41.0 19 36.772434807955754 38.0 35.0 41.0 32.0 41.0 20 36.58686483098635 38.0 35.0 41.0 31.0 41.0 21 36.469738468172054 38.0 35.0 41.0 31.0 41.0 22 36.4073649478622 38.0 35.0 40.0 31.0 41.0 23 36.416606055752105 38.0 35.0 40.0 31.0 41.0 24 36.30105821534771 38.0 35.0 40.0 31.0 41.0 25 36.22351039170638 37.0 35.0 40.0 31.0 41.0 26 36.07993097340353 37.0 35.0 40.0 31.0 41.0 27 35.972745111004116 37.0 35.0 40.0 30.0 41.0 28 35.92614377685001 37.0 35.0 40.0 30.0 41.0 29 35.970330297665555 37.0 35.0 40.0 30.0 41.0 30 35.95191979057338 37.0 35.0 40.0 30.0 41.0 31 35.80318945342148 37.0 35.0 40.0 30.0 41.0 32 35.682940503208734 37.0 34.0 40.0 30.0 41.0 33 35.54938819451494 37.0 34.0 40.0 29.0 41.0 34 35.42618335632047 37.0 34.0 40.0 29.0 41.0 35 35.347432316777315 37.0 34.0 40.0 29.0 41.0 36 35.22199519644921 37.0 34.0 40.0 27.0 41.0 37 35.17524951363816 37.0 34.0 40.0 27.0 41.0 38 35.12146334149446 37.0 34.0 40.0 27.0 41.0 39 35.06649909805371 37.0 34.0 40.0 27.0 41.0 40 34.898413934208676 36.0 34.0 40.0 26.0 41.0 41 34.8543186789956 36.0 34.0 40.0 26.0 41.0 42 34.80481733375924 36.0 34.0 40.0 26.0 41.0 43 34.71667059357099 36.0 34.0 40.0 26.0 41.0 44 34.62368118876241 36.0 34.0 40.0 26.0 41.0 45 34.53886936819058 35.0 34.0 40.0 25.0 41.0 46 34.538156006440744 35.0 34.0 40.0 25.0 41.0 47 34.495623441849375 35.0 34.0 40.0 25.0 41.0 48 34.42644877159293 35.0 34.0 40.0 25.0 41.0 49 34.380333566464174 36.0 34.0 40.0 25.0 41.0 50 34.29275677065047 35.0 34.0 40.0 24.0 41.0 51 33.942823031340424 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 2.0 13 8.0 14 8.0 15 52.0 16 99.0 17 253.0 18 617.0 19 1064.0 20 1825.0 21 2781.0 22 4373.0 23 6156.0 24 8976.0 25 12936.0 26 16733.0 27 19379.0 28 21400.0 29 23339.0 30 27430.0 31 33102.0 32 41342.0 33 54654.0 34 99739.0 35 157377.0 36 68209.0 37 89051.0 38 133402.0 39 249294.0 40 183.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.19969472587259 24.676356341888397 29.296910286844064 15.827038645394953 2 31.649514010666902 26.193972931367338 28.52050076877301 13.636012289192756 3 28.926260187057235 24.90982865348779 31.956930085892104 14.206981073562869 4 26.969451167780633 27.519000474022366 30.69224959465966 14.819298763537342 5 23.93030660586018 30.891357613087862 30.36797732142907 14.810358459622886 6 23.43952117222285 39.48978803098188 26.971313731096146 10.099377065699128 7 86.27290836467873 4.151839886607146 7.731220938191767 1.8440308105223653 8 87.37172759266485 3.1936441889421476 7.296498660351336 2.1381295580416637 9 83.76515311667376 4.758476758469308 8.379299843824066 3.097070281032866 10 51.59728773529996 25.94830083005134 13.358117842518407 9.096293592130298 11 44.85499478947912 20.003184983269527 21.803911196706245 13.337909030545106 12 40.15015985449655 20.357723910377178 24.945589869145614 14.546526365980652 13 23.918665585138235 34.12448814431885 26.1163040411105 15.840542229432412 14 16.49616451649253 36.02448898247235 30.412399456504026 17.066947044531094 15 15.51189293241037 24.19888823595697 44.0193557579748 16.269863073657863 16 20.580765867409706 20.416487782981573 42.00881178704569 16.993934562563037 17 21.99575521820395 20.146974871227027 28.221652484799154 29.635617425769865 18 24.715004530685263 23.85310335643222 31.824408705993452 19.607483406889063 19 28.97207924461882 25.961897542254576 25.732895382612416 19.333127830514186 20 30.314428626108107 25.226278160793232 26.14042423604637 18.31886897705229 21 25.247418254424286 25.71864677324875 30.279878076605364 18.7540568957216 22 22.905431141499864 22.47564465644554 30.033647206294717 24.585276995759877 23 20.655454656361723 26.659800016576813 29.281730395822642 23.40301493123882 24 21.373007173662607 24.2079216680372 35.836370087605665 18.582701070694522 25 20.56102269626528 24.717984631990085 33.095328784332864 21.625663887411772 26 18.72006511521351 32.01373826701521 27.589871008177585 21.67632560959369 27 18.563051027715876 30.374682549364913 32.26090041898362 18.801366003935595 28 16.525872401374944 27.27025514323578 37.05821162258135 19.145660832807934 29 17.379671425205512 25.86085348238807 36.29027676759587 20.469198324810552 30 21.09874472545351 26.724989732619726 33.03675116806002 19.13951437386675 31 29.112889031271504 25.08621339946675 27.217917114069895 18.58298045519185 32 29.43092171739513 26.456594358854485 26.775837711133192 17.33664621261719 33 27.000462846983904 26.21604430665615 26.44979600275287 20.333696843607076 34 20.526006505933662 26.712510558405793 29.79672915256163 22.964753783098914 35 20.60153344837766 26.413569146266163 30.68526498222649 22.299632423129683 36 28.598355915361395 25.34166395818918 28.145659901526276 17.91432022492315 37 21.147450756154143 30.837250148772245 28.267937183189623 19.747361911883992 38 21.34581374925614 31.677359332233802 25.201506068696922 21.775320849813138 39 20.995279333276837 29.59398913566818 26.959765838539973 22.45096569251501 40 24.401721381016195 25.854334510783776 27.091169680449322 22.652774427750703 41 18.91414421268983 24.327684489224605 29.210766733501647 27.547404564583918 42 22.124923984134686 24.533218351091325 27.69305701585693 25.64880064891706 43 22.434668263504282 24.767715072514246 27.783484464825026 25.014132199156446 44 20.208905101467792 28.65125271352193 29.36116872122922 21.778673463781058 45 19.359203716931354 33.067110950102865 24.657451324235954 22.916234008729834 46 22.84042768178851 30.08486769747129 26.751251875368435 20.32345274537176 47 22.20901871783004 27.186905434866627 28.183283680499617 22.42079216680372 48 23.146446834527083 25.164720443215565 30.693553388980515 20.995279333276837 49 21.836133542064594 24.48954124134257 31.21106660619544 22.46325861039739 50 19.623501451402465 30.741141881691842 28.629553850896215 21.005802816009478 51 18.65021899088182 31.85057772057639 26.601315528469744 22.897887760072045 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 812.0 1 1831.0 2 2850.0 3 6391.0 4 9932.0 5 7205.0 6 4478.0 7 4602.0 8 4726.0 9 4835.0 10 4944.0 11 5002.5 12 5061.0 13 4957.0 14 4853.0 15 4593.0 16 4333.0 17 4234.0 18 4135.0 19 4144.5 20 4154.0 21 4375.5 22 4597.0 23 5058.0 24 5519.0 25 6470.0 26 9252.0 27 11083.0 28 11628.5 29 12174.0 30 15712.5 31 19251.0 32 19717.0 33 20183.0 34 23089.5 35 25996.0 36 29731.0 37 33466.0 38 38472.0 39 43478.0 40 55026.0 41 66574.0 42 79925.5 43 93277.0 44 94427.5 45 95578.0 46 93314.5 47 91051.0 48 87842.5 49 84634.0 50 78392.5 51 72151.0 52 68771.5 53 65392.0 54 60228.0 55 55064.0 56 51418.0 57 47772.0 58 45566.5 59 43361.0 60 39618.0 61 35875.0 62 31696.0 63 27517.0 64 24744.0 65 21971.0 66 18083.0 67 14195.0 68 12120.0 69 10045.0 70 8485.0 71 6925.0 72 5394.0 73 3863.0 74 3146.0 75 2001.0 76 1573.0 77 1079.5 78 586.0 79 463.5 80 341.0 81 220.5 82 100.0 83 61.5 84 23.0 85 17.0 86 11.0 87 21.5 88 32.0 89 16.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1073789.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.53324997020328 #Duplication Level Percentage of deduplicated Percentage of total 1 81.33524716668079 17.514122086284054 2 6.219120694738817 2.6783576102935047 3 1.9578258194020677 1.2647505830190833 4 1.0590171094973566 0.9121632056611487 5 0.6985283195191536 0.7520792457735981 6 0.5188676125537991 0.6703743601538125 7 0.4146658614250793 0.6250372553723132 8 0.34120364735653835 0.5877778743418745 9 0.3008581300434137 0.5830607987813479 >10 4.642633349628525 25.335558658219643 >50 1.794556953471119 27.575435266112784 >100 0.7131322646440704 20.43842331986714 >500 0.0034744568313962018 0.4673216103291135 >1k 4.343071039245252E-4 0.10829666294999268 >5k 4.343071039245252E-4 0.4872414628406406 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5210 0.4851977436907996 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1158 0.10784241596812781 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.312816577558534E-5 0.0 0.0 0.01694932617115653 0.0 2 9.312816577558534E-5 0.0 0.0 0.06910109900548432 0.0 3 9.312816577558534E-5 0.0 0.0 0.11519954106439906 0.0 4 9.312816577558534E-5 0.0 0.0 0.22192441904321986 0.0 5 9.312816577558534E-5 0.0 0.0 0.43081089487785773 0.0 6 9.312816577558534E-5 0.0 0.0 0.61492527861619 0.0 7 9.312816577558534E-5 0.0 0.0 0.734408715306266 0.0 8 9.312816577558534E-5 0.0 0.0 0.9619208242960209 0.0 9 9.312816577558534E-5 0.0 0.0 1.0489025311304176 0.0 10 9.312816577558534E-5 0.0 0.0 1.1953931358954133 0.0 11 9.312816577558534E-5 0.0 0.0 1.425233449029558 0.0 12 9.312816577558534E-5 0.0 0.0 1.6174499831903661 0.0 13 9.312816577558534E-5 0.0 0.0 1.6917662594792833 0.0 14 9.312816577558534E-5 0.0 0.0 1.722126041522124 0.0 15 9.312816577558534E-5 0.0 0.0 1.7676657145863852 0.0 16 9.312816577558534E-5 0.0 0.0 1.8577206508913762 0.0 17 9.312816577558534E-5 0.0 0.0 1.9589509670894374 0.0 18 9.312816577558534E-5 0.0 0.0 2.091099834324993 0.0 19 9.312816577558534E-5 0.0 0.0 2.182737949448169 0.0 20 9.312816577558534E-5 0.0 0.0 2.2890903147638877 0.0 21 9.312816577558534E-5 0.0 0.0 2.426640615614427 0.0 22 9.312816577558534E-5 0.0 0.0 2.5590688673473094 0.0 23 9.312816577558534E-5 0.0 0.0 2.693918451390357 0.0 24 9.312816577558534E-5 0.0 0.0 2.798967022385217 0.0 25 9.312816577558534E-5 0.0 0.0 2.890325753011066 0.0 26 1.8625633155117067E-4 0.0 0.0 2.983640175118203 0.0 27 1.8625633155117067E-4 0.0 0.0 3.102937355476728 0.0 28 1.8625633155117067E-4 0.0 0.0 3.2118973094341627 0.0 29 1.8625633155117067E-4 0.0 0.0 3.346840021642986 0.0 30 1.8625633155117067E-4 0.0 0.0 3.4910955504293675 0.0 31 1.8625633155117067E-4 0.0 0.0 3.6246413401515567 0.0 32 1.8625633155117067E-4 0.0 0.0 3.742262213526121 0.0 33 1.8625633155117067E-4 0.0 0.0 3.8811163086975187 0.0 34 1.8625633155117067E-4 0.0 0.0 4.02853819512027 0.0 35 1.8625633155117067E-4 0.0 0.0 4.204364172104576 0.0 36 1.8625633155117067E-4 0.0 0.0 4.350296007874918 0.0 37 1.8625633155117067E-4 0.0 0.0 4.508707017859188 0.0 38 1.8625633155117067E-4 0.0 0.0 4.736871024009372 0.0 39 1.8625633155117067E-4 0.0 0.0 5.178112273454095 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 30 2.1653668E-6 45.000004 1 CGCTAAC 30 2.1653668E-6 45.000004 35 TCGCTAA 30 2.1653668E-6 45.000004 34 ATACGTA 30 2.1653668E-6 45.000004 37 TCACGAC 175 0.0 45.0 25 AACGTAC 25 3.8906335E-5 45.0 37 CTATGCG 20 7.033079E-4 45.0 1 ATATGCG 55 1.8189894E-12 45.0 1 CGCTATC 20 7.033079E-4 45.0 41 ATATACG 35 1.211829E-7 45.0 1 CACGTAT 25 3.8906335E-5 45.0 42 CCCGGTC 20 7.033079E-4 45.0 44 TAATGCG 40 6.8139343E-9 45.0 1 CCGTTCG 20 7.033079E-4 45.0 32 AAGTCGC 20 7.033079E-4 45.0 40 CTCACGA 180 0.0 43.75 24 CGGGATA 155 0.0 43.548386 6 GGCGATA 220 0.0 41.93182 8 CATACGA 340 0.0 41.691177 18 ATAGCGG 135 0.0 41.666664 2 >>END_MODULE