SRR1547036_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547036_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1641203
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7957	0.48482728827573435	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1851	0.11278312311152246	No Hit
AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1753	0.10681189347082597	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTACTG	45	3.8562575E-10	45.000004	44
CTGTCGA	25	3.891538E-5	45.0	11
TAACGCG	25	3.891538E-5	45.0	1
TATGCGA	20	7.034172E-4	45.0	15
CATTACG	70	0.0	45.0	30
ATATCGC	35	1.2123564E-7	45.0	38
GTATCGA	20	7.034172E-4	45.0	29
TTACGCA	20	7.034172E-4	45.0	1
CGCAATA	20	7.034172E-4	45.0	21
TGTACGA	20	7.034172E-4	45.0	12
ATCGATC	25	3.891538E-5	45.0	27
TACGTAC	35	1.2123564E-7	45.0	42
AATCGAC	20	7.034172E-4	45.0	29
ACGGGTA	120	0.0	44.999996	5
CCGAATT	30	2.1660726E-6	44.999996	36
AATGTCG	65	0.0	44.999996	1
TACGGGT	175	0.0	43.714287	4
TACGTAG	150	0.0	43.5	1
TATCGTG	120	0.0	43.124996	1
CGACGGT	355	0.0	43.09859	28