##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547036_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1641203 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.394497207231524 31.0 31.0 33.0 30.0 34.0 2 31.805778444226583 31.0 31.0 34.0 30.0 34.0 3 31.925875105029665 31.0 31.0 34.0 30.0 34.0 4 35.667970994447366 37.0 35.0 37.0 33.0 37.0 5 35.553547611112094 37.0 35.0 37.0 33.0 37.0 6 35.61079707994684 37.0 35.0 37.0 33.0 37.0 7 35.99238119842579 37.0 35.0 37.0 35.0 37.0 8 35.996216799506215 37.0 35.0 37.0 35.0 37.0 9 37.78969146412723 39.0 38.0 39.0 35.0 39.0 10 37.19426237948627 39.0 37.0 39.0 33.0 39.0 11 36.853972360518476 39.0 37.0 39.0 33.0 39.0 12 35.9653790542669 37.0 35.0 39.0 32.0 39.0 13 35.599466976358194 37.0 35.0 39.0 31.0 39.0 14 36.44921926172448 38.0 35.0 41.0 31.0 41.0 15 36.808424673852045 38.0 35.0 41.0 31.0 41.0 16 36.96745375191247 38.0 35.0 41.0 32.0 41.0 17 36.92926225457789 38.0 35.0 41.0 32.0 41.0 18 36.835591940789776 38.0 35.0 41.0 32.0 41.0 19 36.802839136901405 38.0 35.0 41.0 32.0 41.0 20 36.63415068093344 38.0 35.0 41.0 31.0 41.0 21 36.49369212705558 38.0 35.0 41.0 31.0 41.0 22 36.4114969324331 38.0 35.0 40.0 31.0 41.0 23 36.438250478460006 38.0 35.0 40.0 31.0 41.0 24 36.33324335868262 38.0 35.0 40.0 31.0 41.0 25 36.26852193177809 37.0 35.0 40.0 31.0 41.0 26 36.13888470835113 37.0 35.0 40.0 31.0 41.0 27 36.044857948712014 37.0 35.0 40.0 30.0 41.0 28 36.04176083031776 37.0 35.0 40.0 30.0 41.0 29 36.08362585249966 37.0 35.0 40.0 30.0 41.0 30 36.08289102566837 37.0 35.0 40.0 30.0 41.0 31 35.9622721869263 37.0 35.0 40.0 30.0 41.0 32 35.85836243292268 37.0 35.0 40.0 30.0 41.0 33 35.77143656208281 37.0 35.0 40.0 30.0 41.0 34 35.679822666665856 37.0 35.0 40.0 30.0 41.0 35 35.606020705543436 37.0 34.0 40.0 29.0 41.0 36 35.49618298284856 37.0 34.0 40.0 29.0 41.0 37 35.47578879638899 37.0 34.0 40.0 29.0 41.0 38 35.43199592006595 37.0 34.0 40.0 29.0 41.0 39 35.38925227409406 37.0 34.0 40.0 29.0 41.0 40 35.23113837837245 37.0 34.0 40.0 28.0 41.0 41 35.21887725040717 37.0 34.0 40.0 28.0 41.0 42 35.157769026744404 36.0 34.0 40.0 28.0 41.0 43 35.07692588911914 36.0 34.0 40.0 27.0 41.0 44 34.96051250210973 36.0 34.0 40.0 27.0 41.0 45 34.86171667977697 36.0 34.0 40.0 27.0 41.0 46 34.85467428465583 36.0 34.0 40.0 27.0 41.0 47 34.83388343794156 36.0 34.0 40.0 27.0 41.0 48 34.782019652657226 35.0 34.0 40.0 27.0 41.0 49 34.74364536257855 36.0 34.0 40.0 27.0 41.0 50 34.64188829779132 35.0 34.0 40.0 27.0 41.0 51 34.272246638593764 35.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 7.0 12 9.0 13 8.0 14 21.0 15 52.0 16 161.0 17 319.0 18 660.0 19 1329.0 20 2278.0 21 3692.0 22 5677.0 23 8213.0 24 11788.0 25 17001.0 26 22256.0 27 26779.0 28 29957.0 29 34540.0 30 40858.0 31 50724.0 32 63101.0 33 84059.0 34 153208.0 35 248406.0 36 105332.0 37 135666.0 38 203687.0 39 391101.0 40 310.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.29405503158354 23.66678588815643 30.135089930983554 13.904069149276477 2 30.837684308400604 25.150027144722497 30.665798198029126 13.346490348847768 3 28.966861503421576 24.70925290777558 32.578541472322435 13.74534411648041 4 27.201144526301746 27.001534849741315 31.205097724047544 14.592222899909396 5 24.389913983827714 30.791133089569055 30.017615127440056 14.801337799163175 6 22.143513020631815 40.43302382459696 26.77572487985947 10.647738274911758 7 87.08605821461452 4.3850760692004584 6.605825117307243 1.9230405988777743 8 88.65204365334452 2.7754640955445486 6.400548865679627 2.1719433854312964 9 84.99539666939434 4.363933041799217 7.828952299014808 2.8117179897916342 10 51.761360416718716 24.016102822137174 13.25034136544961 10.972195395694499 11 44.60124676837661 21.53542249191599 20.156251237659205 13.707079502048192 12 40.41925343787454 21.184338561408918 23.48052008191552 14.915887918801026 13 24.511227434997377 33.874176442524174 24.76451724740937 16.85007887506908 14 16.354771469464776 38.295567336886414 28.54704750113179 16.802613692517014 15 16.2572210750285 24.844824192985268 43.63945227982157 15.258502452164663 16 20.122129925426655 20.325456387783838 42.25010556280972 17.30230812397979 17 20.530488915752652 21.16526718510751 26.98496164094265 31.31928225819719 18 23.77999552767086 24.05168647632255 33.36540330477095 18.802914691235635 19 29.182435079633656 25.98209971587914 25.200417011180214 19.635048193306982 20 30.827265121986734 25.928846096430487 25.09683445618854 18.147054325394237 21 25.30704611190694 27.05545870925169 28.954492527737273 18.6830026511041 22 23.337332432368207 21.358844701112538 30.00890200663782 25.294920859881444 23 20.97016639623496 27.433535034971296 28.38612895540649 23.21016961338725 24 21.867800631609864 23.71748040918765 36.21867617838866 18.19604278081383 25 21.058394360721984 24.43414982790063 32.94479720059005 21.56265861078733 26 17.955426598659642 32.624666174751084 27.501290212118796 21.91861701447048 27 17.09946910894021 33.144833393553384 31.031261824405632 18.724435673100768 28 16.06090166786193 28.05423826303023 36.31287537251638 19.571984696591464 29 17.603063118943847 26.225335927365474 35.75322492098783 20.418376032702838 30 20.070277717016115 29.199008288432328 31.7718161616814 18.958897832870157 31 29.13838202830485 25.23618345810969 27.23843424609875 18.387000267486716 32 29.13917413019596 25.994529622478147 27.156299373081822 17.709996874244077 33 28.003726534743112 26.859017440255716 25.92232648855748 19.214929536443695 34 20.501607662184384 27.52584537074329 28.423662398862298 23.548884568210028 35 20.259468207162673 26.84122561316303 31.148371042460926 21.75093513721337 36 28.999764197360108 25.32605655729364 27.282974744745164 18.391204500601084 37 20.66904581578269 31.342923453101168 28.553384316260694 19.434646414855443 38 21.196646606178515 32.097491900758165 24.98983976997361 21.71602172308971 39 21.120970410119895 29.568371493349694 28.077635734275407 21.233022362255006 40 25.00342736395193 25.26878149747472 27.499827870165973 22.227963268407382 41 18.978152001915667 23.83318821620482 28.965581954212855 28.22307782766666 42 21.63809108318715 25.06222569663838 26.599756398203024 26.69992682197144 43 22.33258164894897 24.204135624904417 26.92555399910919 26.537728727037425 44 20.022142294402336 28.069470991705476 29.728802591757386 22.1795841221348 45 19.655033533328904 34.10754184582894 24.583796154406247 21.6536284664359 46 22.800774797511338 30.49318091668124 25.991909593146 20.71413469266142 47 21.32441873430648 27.322092391983198 27.521275552140718 23.832213321569604 48 22.20188483691536 25.52438668464535 31.489462302957037 20.78426617548225 49 22.456941645853682 24.299309713667352 31.49013254301875 21.753616097460217 50 20.21541515583386 30.707474943684606 28.507868922979057 20.569240977502478 51 18.9615178622023 31.99756520064855 26.917328325624556 22.123588611524596 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1509.0 1 2581.5 2 3654.0 3 8772.0 4 13890.0 5 9733.0 6 5576.0 7 5682.0 8 5788.0 9 6122.5 10 6457.0 11 6366.5 12 6276.0 13 6001.0 14 5726.0 15 5452.0 16 5178.0 17 4757.5 18 4337.0 19 4915.0 20 5493.0 21 5621.5 22 5750.0 23 6374.0 24 6998.0 25 8670.5 26 12502.0 27 14661.0 28 16003.0 29 17345.0 30 22110.0 31 26875.0 32 30084.5 33 33294.0 34 35480.5 35 37667.0 36 44528.5 37 51390.0 38 59766.0 39 68142.0 40 86374.5 41 104607.0 42 126471.5 43 148336.0 44 154134.0 45 159932.0 46 155302.5 47 150673.0 48 146489.0 49 142305.0 50 129061.0 51 115817.0 52 108294.5 53 100772.0 54 91015.5 55 81259.0 56 75791.5 57 70324.0 58 64859.0 59 59394.0 60 54532.5 61 49671.0 62 45431.0 63 41191.0 64 35611.5 65 30032.0 66 24881.5 67 19731.0 68 15400.5 69 11070.0 70 9436.5 71 7803.0 72 6889.0 73 5975.0 74 4350.0 75 2284.5 76 1844.0 77 1339.0 78 834.0 79 537.5 80 241.0 81 225.5 82 210.0 83 140.5 84 71.0 85 43.5 86 16.0 87 14.5 88 13.0 89 8.0 90 3.0 91 3.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1641203.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.523739500576852 #Duplication Level Percentage of deduplicated Percentage of total 1 80.8116505816318 14.969339639857873 2 7.759649911057928 2.8747546713622283 3 2.455406469649258 1.3644992943544179 4 1.1348943692563074 0.8408995062710126 5 0.6975049162758963 0.6460199684733184 6 0.4748268762084386 0.5277341617654662 7 0.3549001251194661 0.4601854226504585 8 0.25938585004121056 0.3843836733039261 9 0.234375164543004 0.39073540440594984 >10 3.013917028373077 13.660304379504563 >50 1.3864864033138418 18.678359034389125 >100 1.407051445649765 43.398652457962676 >500 0.00796068710410041 0.8861833395407972 >1k 0.001658476480020919 0.42905208763872893 >5k 3.3169529600418374E-4 0.48889695851945664 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7957 0.48482728827573435 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1851 0.11278312311152246 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1753 0.10681189347082597 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2186182940196916E-4 0.0 0.0 0.053070826704557574 0.0 2 1.8279274410295374E-4 0.0 0.0 0.18565649709390003 0.0 3 1.8279274410295374E-4 0.0 0.0 0.26961929755185676 0.0 4 1.8279274410295374E-4 0.0 0.0 0.41305067075797447 0.0 5 1.8279274410295374E-4 0.0 0.0 0.7299523581177954 0.0 6 1.8279274410295374E-4 0.0 0.0 0.9902492257204014 0.0 7 1.8279274410295374E-4 0.0 0.0 1.1589669285274278 0.0 8 1.8279274410295374E-4 0.0 0.0 1.4886641079744554 0.0 9 1.8279274410295374E-4 0.0 0.0 1.5838991276520942 0.0 10 1.8279274410295374E-4 0.0 0.0 1.7674839736461607 0.0 11 1.8279274410295374E-4 0.0 0.0 2.0455117374267533 0.0 12 1.8279274410295374E-4 0.0 0.0 2.260293211747724 0.0 13 1.8279274410295374E-4 0.0 0.0 2.3502272418463774 0.0 14 1.8279274410295374E-4 0.0 0.0 2.3898932673167184 0.0 15 1.8279274410295374E-4 0.0 0.0 2.4502758037853942 0.0 16 1.8279274410295374E-4 0.0 0.0 2.5779260700839566 0.0 17 1.8279274410295374E-4 0.0 0.0 2.720199755910756 0.0 18 1.8279274410295374E-4 0.0 0.0 2.9123149299629603 0.0 19 1.8279274410295374E-4 0.0 0.0 3.0216249909365263 0.0 20 1.8279274410295374E-4 0.0 0.0 3.157805585293227 0.0 21 1.8279274410295374E-4 0.0 0.0 3.331580554020435 0.0 22 1.8279274410295374E-4 0.0 0.0 3.5041369044536235 0.0 23 1.8279274410295374E-4 0.0 0.0 3.6829691391010133 0.0 24 1.8279274410295374E-4 0.0 0.0 3.8239632757190916 0.0 25 2.4372365880393832E-4 0.0 0.0 3.9524665748234677 0.0 26 2.4372365880393832E-4 0.0 0.0 4.081822906733658 0.0 27 2.4372365880393832E-4 0.0 0.0 4.222573319692932 0.0 28 2.4372365880393832E-4 0.0 0.0 4.358814844964334 0.0 29 2.4372365880393832E-4 0.0 0.0 4.523693900145198 0.0 30 2.4372365880393832E-4 0.0 0.0 4.704841509551225 0.0 31 2.4372365880393832E-4 0.0 0.0 4.866491226252938 0.0 32 2.4372365880393832E-4 0.0 0.0 5.022839953375664 0.0 33 2.4372365880393832E-4 0.0 0.0 5.181504055257028 0.0 34 2.4372365880393832E-4 0.0 0.0 5.358813017036893 0.0 35 2.4372365880393832E-4 0.0 0.0 5.5633580976880985 0.0 36 2.4372365880393832E-4 0.0 0.0 5.7299432184805905 0.0 37 2.4372365880393832E-4 0.0 0.0 5.90755683483396 0.0 38 2.4372365880393832E-4 0.0 0.0 6.1265425422692985 0.0 39 2.4372365880393832E-4 0.0 0.0 6.4659886680684835 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACTG 45 3.8562575E-10 45.000004 44 CTGTCGA 25 3.891538E-5 45.0 11 TAACGCG 25 3.891538E-5 45.0 1 TATGCGA 20 7.034172E-4 45.0 15 CATTACG 70 0.0 45.0 30 ATATCGC 35 1.2123564E-7 45.0 38 GTATCGA 20 7.034172E-4 45.0 29 TTACGCA 20 7.034172E-4 45.0 1 CGCAATA 20 7.034172E-4 45.0 21 TGTACGA 20 7.034172E-4 45.0 12 ATCGATC 25 3.891538E-5 45.0 27 TACGTAC 35 1.2123564E-7 45.0 42 AATCGAC 20 7.034172E-4 45.0 29 ACGGGTA 120 0.0 44.999996 5 CCGAATT 30 2.1660726E-6 44.999996 36 AATGTCG 65 0.0 44.999996 1 TACGGGT 175 0.0 43.714287 4 TACGTAG 150 0.0 43.5 1 TATCGTG 120 0.0 43.124996 1 CGACGGT 355 0.0 43.09859 28 >>END_MODULE