##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547031_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1345515 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.402652515951143 31.0 31.0 33.0 30.0 34.0 2 31.819345009160063 31.0 31.0 34.0 30.0 34.0 3 31.958780095353823 33.0 31.0 34.0 30.0 34.0 4 35.69490938413916 37.0 35.0 37.0 33.0 37.0 5 35.59564627670446 37.0 35.0 37.0 33.0 37.0 6 35.65746795836539 37.0 35.0 37.0 33.0 37.0 7 36.013475137772524 37.0 35.0 37.0 35.0 37.0 8 36.01245545385967 37.0 35.0 37.0 35.0 37.0 9 37.78767535107375 39.0 38.0 39.0 35.0 39.0 10 37.13327610617496 39.0 37.0 39.0 33.0 39.0 11 36.875044871294634 39.0 37.0 39.0 33.0 39.0 12 36.25762254601398 38.0 35.0 39.0 32.0 39.0 13 36.032503539536904 38.0 35.0 39.0 32.0 39.0 14 36.95302021902394 39.0 35.0 41.0 31.0 41.0 15 37.22323719913936 39.0 35.0 41.0 32.0 41.0 16 37.33106282724459 39.0 35.0 41.0 32.0 41.0 17 37.256983385543826 39.0 35.0 41.0 32.0 41.0 18 37.15973437679996 39.0 35.0 41.0 32.0 41.0 19 37.13060946923669 39.0 35.0 41.0 32.0 41.0 20 36.97171863561536 39.0 35.0 41.0 32.0 41.0 21 36.88129749575442 38.0 35.0 41.0 31.0 41.0 22 36.82157538191696 38.0 35.0 41.0 31.0 41.0 23 36.777142581093486 38.0 35.0 41.0 31.0 41.0 24 36.70819426019034 38.0 35.0 41.0 31.0 41.0 25 36.641713395985924 38.0 35.0 41.0 31.0 41.0 26 36.53120775316515 38.0 35.0 41.0 31.0 41.0 27 36.44947250680966 38.0 35.0 40.0 31.0 41.0 28 36.37727561565646 38.0 35.0 40.0 31.0 41.0 29 36.415597745101316 38.0 35.0 40.0 31.0 41.0 30 36.385230190670484 38.0 35.0 40.0 31.0 41.0 31 36.28364603887731 38.0 35.0 40.0 30.0 41.0 32 36.209542071251526 38.0 35.0 41.0 30.0 41.0 33 36.106921884928816 38.0 35.0 41.0 30.0 41.0 34 35.98846463993341 38.0 35.0 41.0 30.0 41.0 35 35.93321962222643 38.0 35.0 41.0 30.0 41.0 36 35.84309650951494 38.0 35.0 41.0 29.0 41.0 37 35.81783183390746 38.0 35.0 41.0 29.0 41.0 38 35.753681675789565 38.0 35.0 41.0 29.0 41.0 39 35.69269759162849 38.0 35.0 40.0 29.0 41.0 40 35.56895017892777 38.0 35.0 40.0 28.0 41.0 41 35.53448753822886 38.0 34.0 40.0 28.0 41.0 42 35.50346893197029 38.0 34.0 40.0 28.0 41.0 43 35.41488575006596 38.0 34.0 40.0 28.0 41.0 44 35.294302181692515 37.0 34.0 40.0 27.0 41.0 45 35.19166490154328 37.0 34.0 40.0 27.0 41.0 46 35.18270179076413 37.0 34.0 40.0 27.0 41.0 47 35.157485423796835 37.0 34.0 40.0 27.0 41.0 48 35.082268871027075 37.0 34.0 40.0 27.0 41.0 49 35.022751139898105 37.0 34.0 40.0 27.0 41.0 50 34.95131603884015 36.0 34.0 40.0 27.0 41.0 51 34.59981122469835 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 4.0 11 6.0 12 7.0 13 9.0 14 25.0 15 33.0 16 96.0 17 255.0 18 565.0 19 1016.0 20 1815.0 21 2758.0 22 4337.0 23 6388.0 24 9080.0 25 12988.0 26 17496.0 27 21403.0 28 23659.0 29 26540.0 30 31525.0 31 38725.0 32 48726.0 33 63781.0 34 110999.0 35 163555.0 36 91067.0 37 120675.0 38 184355.0 39 363353.0 40 271.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.49848570993263 23.835111462897107 29.629472729772615 14.03693009739765 2 30.662608740891034 24.92190722511455 30.67769590082608 13.73778813316834 3 30.51879763510626 25.116999810481488 31.178990943987987 13.185211610424261 4 27.492075524984855 26.31884445732675 31.48497043882826 14.70410957886014 5 24.577280818125402 31.051158849957076 29.67183569116658 14.699724640750938 6 23.25771173119586 40.76335083592528 25.496185475449924 10.48275195742894 7 87.67995897481633 4.0500477512328 6.521443462168761 1.7485498117821057 8 89.08388237960929 2.9082544601881066 6.09402347799913 1.9138396822034685 9 84.53610699248986 4.989910926299595 7.871335510938191 2.6026465702723494 10 45.40930424409984 27.53012786925452 17.339531703474133 9.721036183171499 11 39.55474297945397 23.780559859979263 22.044644615630446 14.620052544936327 12 35.78674336592309 22.44099842811117 25.497225969238546 16.275032236727203 13 25.83523780857144 28.479875735313243 26.96372764331873 18.721158812796588 14 17.930680817382193 32.88606964619495 30.28944307569964 18.893806460723216 15 18.002177604857618 27.28531454498835 37.86022452369539 16.852283326458643 16 23.33002604950521 23.837266771459255 36.20227199250844 16.630435186527095 17 23.154033957258 24.31448181551302 27.74840860191079 24.783075625318187 18 24.899016361764826 26.37696346751987 30.791778612650173 17.932241558065126 19 27.734956503643588 28.489091537441052 25.891647436111825 17.884304522803536 20 29.157980401556284 27.284571335139336 26.545672103246716 17.011776160057675 21 26.480046673578517 26.80653876025165 29.358721381775748 17.35469318439408 22 24.67508723425603 22.04828634389063 30.8455126847341 22.431113737119244 23 23.001304333285024 25.432195107449562 30.082013206839015 21.484487352426395 24 22.385480652389607 25.04899610929644 33.80125825427439 18.76426498403957 25 21.199466375328406 26.198221498831302 31.643125494699053 20.959186631141236 26 20.457965908964226 31.602471915957832 27.336150098661104 20.603412076416834 27 18.888529670795197 31.01719415985701 30.548451708082037 19.54582446126576 28 17.493822068130047 29.188452005365974 33.83470269748015 19.48302322902383 29 20.030545924794595 27.398505404993628 32.92479087932873 19.646157790883045 30 21.93137943464027 27.6565478645723 31.88935091767836 18.52272178310907 31 27.317198247511175 25.847500771080217 27.73190934326262 19.10339163814599 32 27.73607131841711 26.603345187530426 27.926258718780538 17.734324775271922 33 26.496248648287086 27.219689115320158 26.89698739887701 19.387074837515748 34 20.898837991401063 27.905151559068457 29.507809277488544 21.688201172041932 35 20.685388122763403 29.372173480042957 29.430143848266276 20.51229454892736 36 25.987744469589714 28.41722314504112 27.164765907477808 18.430266477891365 37 22.190313746037763 30.89701712727097 27.48598120422292 19.42668792246835 38 21.926251286682053 32.144643500815675 24.848106487107167 21.08099872539511 39 22.3368747282639 29.221970769556638 27.00445554304486 21.436698959134606 40 23.679111715588455 26.197032363072875 27.510507129240473 22.613348792098193 41 19.241554349078235 25.390501034919716 29.14467694525888 26.223267670743173 42 21.19567600509842 26.239321003481937 26.9318439407959 25.63315905062374 43 21.820046599257534 25.360698319974134 28.21952932520262 24.599725755565714 44 20.855508857203375 27.32403577812213 29.7034964307347 22.11695893393979 45 21.197608350705863 31.643274136668857 25.85010200555178 21.3090155070735 46 22.240926336755816 29.418995700531024 27.180224672337356 21.159853290375803 47 21.421686120184464 27.92529254597682 27.998127111180477 22.65489422265824 48 21.86501079512306 26.828389129812745 30.31292850692857 20.99367156813562 49 21.988309309074964 25.91572743521997 30.242769497181378 21.853193758523688 50 19.707769887366545 29.139920402225172 29.201829782648282 21.950479927760004 51 18.998524728449702 30.569038620899804 27.88359847344697 22.548838177203525 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1205.0 1 2420.5 2 3636.0 3 8292.5 4 12949.0 5 9175.0 6 5401.0 7 5371.5 8 5342.0 9 5418.0 10 5494.0 11 5330.5 12 5167.0 13 5093.0 14 5019.0 15 4880.5 16 4742.0 17 4668.0 18 4594.0 19 4485.5 20 4377.0 21 4824.5 22 5272.0 23 5722.0 24 6172.0 25 7627.5 26 10979.5 27 12876.0 28 15825.0 29 18774.0 30 22048.5 31 25323.0 32 30357.5 33 35392.0 34 40222.5 35 45053.0 36 44485.0 37 43917.0 38 53209.0 39 62501.0 40 71722.5 41 80944.0 42 95837.5 43 110731.0 44 109424.5 45 108118.0 46 107151.5 47 106185.0 48 105800.5 49 105416.0 50 97891.5 51 90367.0 52 84868.5 53 79370.0 54 74163.0 55 68956.0 56 66808.0 57 64660.0 58 60086.5 59 55513.0 60 51601.0 61 47689.0 62 42428.0 63 37167.0 64 31115.5 65 25064.0 66 20596.0 67 16128.0 68 13279.0 69 10430.0 70 8607.0 71 6784.0 72 5863.5 73 4943.0 74 3723.5 75 1918.5 76 1333.0 77 889.0 78 445.0 79 381.0 80 317.0 81 204.0 82 91.0 83 63.5 84 36.0 85 29.5 86 23.0 87 13.5 88 4.0 89 4.0 90 4.0 91 3.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1345515.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.897590338581924 #Duplication Level Percentage of deduplicated Percentage of total 1 80.02386872259028 15.922821571505608 2 6.297879847470898 2.5062526641317353 3 2.0914484053511537 1.2484435075187306 4 1.0241639771020055 0.8151358102363402 5 0.7217628055812408 0.718067031354054 6 0.5456812688405961 0.6514645405696663 7 0.43438444494008494 0.6050242614409075 8 0.3801534501977989 0.6051310094267447 9 0.339410889469052 0.6078112951598017 >10 5.492612276471523 27.360270025029426 >50 1.7945031446649087 25.399872433599473 >100 0.849988157778766 22.461091177608427 >500 0.002636206071976677 0.3272389519442188 >1k 0.0011298026022757187 0.2517799126477159 >5k 3.766008674252396E-4 0.5195958078271613 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6934 0.5153417093083318 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.030768887749300453 0.0 2 0.0 0.0 0.0 0.08888789794242354 0.0 3 0.0 0.0 0.0 0.12002839061623245 0.0 4 0.0 0.0 0.0 0.16893159868154572 0.0 5 0.0 0.0 0.0 0.2939394952861915 0.0 6 0.0 0.0 0.0 0.41054912059694615 0.0 7 0.0 0.0 0.0 0.4980992408111392 0.0 8 0.0 0.0 0.0 0.6843476289747792 0.0 9 0.0 0.0 0.0 0.7480407130355291 0.0 10 0.0 0.0 0.0 0.8653935481953007 0.0 11 0.0 0.0 0.0 1.0449530477177884 0.0 12 7.432098490169192E-5 0.0 0.0 1.1912910669892198 0.0 13 7.432098490169192E-5 0.0 0.0 1.2486668673333259 0.0 14 7.432098490169192E-5 0.0 0.0 1.2763142737167552 0.0 15 7.432098490169192E-5 0.0 0.0 1.3220216794312958 0.0 16 7.432098490169192E-5 0.0 0.0 1.4110582193435228 0.0 17 7.432098490169192E-5 0.0 0.0 1.5241004373789961 0.0 18 7.432098490169192E-5 0.0 0.0 1.6467300624667878 0.0 19 7.432098490169192E-5 0.0 0.0 1.7269224051757135 0.0 20 7.432098490169192E-5 0.0 0.0 1.8204182041820418 0.0 21 7.432098490169192E-5 0.0 0.0 1.9420816564661114 0.0 22 7.432098490169192E-5 0.0 0.0 2.0721433800440723 0.0 23 7.432098490169192E-5 0.0 0.0 2.2077791774896602 0.0 24 7.432098490169192E-5 0.0 0.0 2.3119028773369306 0.0 25 7.432098490169192E-5 0.0 0.0 2.410898429225984 0.0 26 7.432098490169192E-5 0.0 0.0 2.5043942282323126 0.0 27 7.432098490169192E-5 0.0 0.0 2.612828545203881 0.0 28 7.432098490169192E-5 0.0 0.0 2.727134219982683 0.0 29 7.432098490169192E-5 0.0 0.0 2.859871499017105 0.0 30 7.432098490169192E-5 0.0 0.0 3.0039798887414855 0.0 31 7.432098490169192E-5 0.0 0.0 3.130548526029067 0.0 32 7.432098490169192E-5 0.0 0.0 3.25763741021096 0.0 33 7.432098490169192E-5 0.0 0.0 3.386881602955002 0.0 34 7.432098490169192E-5 0.0 0.0 3.5293549310115457 0.0 35 7.432098490169192E-5 0.0 0.0 3.703266035681505 0.0 36 7.432098490169192E-5 0.0 0.0 3.8502729438170515 0.0 37 7.432098490169192E-5 0.0 0.0 4.025967752124651 0.0 38 7.432098490169192E-5 0.0 0.0 4.237485275154866 0.0 39 7.432098490169192E-5 0.0 0.0 4.573862052819924 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGAATG 30 2.1657797E-6 45.000004 16 GATCGAC 20 7.033717E-4 45.0 11 CGAATCT 35 1.2121382E-7 45.0 14 TTACGCG 35 1.2121382E-7 45.0 1 CGACTAA 25 3.8911614E-5 45.0 10 TACCGGT 25 3.8911614E-5 45.0 40 TACGGGT 120 0.0 43.125004 4 CGTTTTT 3790 0.0 42.150394 1 TACGGGA 345 0.0 41.739132 4 CGTAAGG 265 0.0 41.603775 2 TTAACGG 65 0.0 41.53846 2 GTATCCG 65 0.0 41.53846 10 CGTTAGG 340 0.0 41.02941 2 CGGTCTA 215 0.0 40.813953 31 TCATACG 50 1.0822987E-9 40.5 1 TAATGCG 50 1.0822987E-9 40.5 1 ATACCGG 50 1.0822987E-9 40.5 2 ACGGGTA 190 0.0 40.263157 5 TATAGCG 95 0.0 40.263157 1 AGGGTAC 570 0.0 39.86842 6 >>END_MODULE