##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547030_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1477436 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.487941271229346 31.0 31.0 33.0 30.0 34.0 2 31.8904196188532 31.0 31.0 34.0 30.0 34.0 3 31.946884332045517 33.0 31.0 34.0 30.0 34.0 4 35.72173549311104 37.0 35.0 37.0 33.0 37.0 5 35.6423080255253 37.0 35.0 37.0 33.0 37.0 6 35.7191851288313 37.0 35.0 37.0 33.0 37.0 7 36.09141986522597 37.0 35.0 37.0 35.0 37.0 8 36.101217920776264 37.0 35.0 37.0 35.0 37.0 9 37.88907539818984 39.0 38.0 39.0 35.0 39.0 10 37.311296056140506 39.0 37.0 39.0 34.0 39.0 11 36.92051635400789 39.0 37.0 39.0 33.0 39.0 12 36.36926201879472 38.0 35.0 39.0 32.0 39.0 13 36.16587317487864 38.0 35.0 39.0 32.0 39.0 14 37.240782680265 39.0 35.0 41.0 32.0 41.0 15 37.49264672039939 39.0 35.0 41.0 33.0 41.0 16 37.57477007464283 39.0 35.0 41.0 33.0 41.0 17 37.52375534371709 39.0 35.0 41.0 33.0 41.0 18 37.38342371513893 39.0 35.0 41.0 33.0 41.0 19 37.31352830173354 39.0 35.0 41.0 33.0 41.0 20 37.114739318657456 38.0 35.0 41.0 32.0 41.0 21 37.019667857017154 38.0 35.0 41.0 32.0 41.0 22 36.92595482985388 38.0 35.0 41.0 32.0 41.0 23 36.88888994176398 38.0 35.0 41.0 32.0 41.0 24 36.82141358407403 38.0 35.0 41.0 32.0 41.0 25 36.754132835533994 38.0 35.0 41.0 32.0 41.0 26 36.62502470496184 38.0 35.0 40.0 32.0 41.0 27 36.55427984697814 38.0 35.0 40.0 31.0 41.0 28 36.49622589404888 38.0 35.0 40.0 31.0 41.0 29 36.5376144888848 38.0 35.0 40.0 31.0 41.0 30 36.4924531417943 38.0 35.0 40.0 31.0 41.0 31 36.373415159776805 38.0 35.0 40.0 31.0 41.0 32 36.195264634136436 38.0 35.0 40.0 30.0 41.0 33 36.03267417336521 38.0 35.0 41.0 30.0 41.0 34 35.877384874877826 38.0 35.0 41.0 30.0 41.0 35 35.7592640222656 38.0 35.0 41.0 30.0 41.0 36 35.63484983444291 38.0 35.0 40.0 29.0 41.0 37 35.57959329541178 38.0 35.0 40.0 29.0 41.0 38 35.546201662880826 38.0 35.0 40.0 29.0 41.0 39 35.49627936506217 38.0 35.0 40.0 29.0 41.0 40 35.37225165760141 38.0 35.0 40.0 27.0 41.0 41 35.35362411637458 38.0 35.0 40.0 28.0 41.0 42 35.31996783617023 38.0 35.0 40.0 27.0 41.0 43 35.23494960187785 38.0 34.0 40.0 27.0 41.0 44 35.10133230813382 37.0 34.0 40.0 27.0 41.0 45 34.98648943169112 37.0 34.0 40.0 26.0 41.0 46 34.95904661860141 37.0 34.0 40.0 26.0 41.0 47 34.93506520756229 37.0 34.0 40.0 26.0 41.0 48 34.86933511840784 37.0 34.0 40.0 26.0 41.0 49 34.80760114143692 37.0 34.0 40.0 26.0 41.0 50 34.719605451606704 37.0 34.0 40.0 26.0 41.0 51 34.36880582306103 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 5.0 12 4.0 13 3.0 14 23.0 15 25.0 16 72.0 17 169.0 18 379.0 19 870.0 20 1557.0 21 2540.0 22 4057.0 23 6594.0 24 10255.0 25 16173.0 26 21866.0 27 24754.0 28 25767.0 29 27726.0 30 32368.0 31 39371.0 32 50440.0 33 66678.0 34 118311.0 35 200917.0 36 104293.0 37 129440.0 38 196698.0 39 395743.0 40 337.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.32503607601277 24.380210039555013 29.649135394020455 15.645618490411767 2 31.015827419935615 26.671815225837193 30.26628564621412 12.046071708013072 3 28.296724866593202 24.725470341862525 34.997793474641206 11.980011316903068 4 25.998418882442287 27.348460440926036 33.48591749490333 13.167203181728345 5 23.580716863539266 31.45774165513768 31.93146775900953 13.03007372231352 6 22.079332031979725 39.743718171210126 28.167176107797566 10.009773689012587 7 85.91465214060034 3.9603069100793538 8.575329151313491 1.5497117980068171 8 87.49312999006386 2.8995503020096978 8.224992486984208 1.3823272209422268 9 82.73353295844964 5.7917229578810865 9.145641503252932 2.329102580416343 10 47.70237086411865 28.543368376024407 14.910425900005144 8.843834859851798 11 36.333756589117904 23.84191261076622 26.13568371151102 13.688647088604853 12 32.94646942405627 23.705527684447922 27.591990448317222 15.756012443178587 13 21.49636261739933 33.87930170917725 29.04179944173555 15.582536231687872 14 15.668563646750181 37.34889362381856 30.709553577955322 16.272989151475937 15 15.381715350106537 27.20341185675725 42.31303420249676 15.10183859063946 16 18.14724969474143 24.985650816685123 40.49129708494987 16.375802403623574 17 18.672957745716225 24.29316735208835 30.306964227215254 26.72691067498017 18 20.9965101703221 27.573241751250137 33.472042105377156 17.95820597305061 19 26.01107594508324 27.517469453837595 28.71528783649512 17.75616676458405 20 27.478144569375594 27.304059194442264 28.450707847920313 16.76708838826183 21 22.742237227196306 28.443330201782008 30.744885057626863 18.069547513394827 22 20.958945091360977 25.26755812096091 30.55800725039866 23.21548953727945 23 18.94640444662239 29.217779991823672 30.19129085794579 21.64452470360814 24 18.736513798228824 27.035688855557872 36.69397523818291 17.533822108030396 25 17.90595328663983 28.96152523696458 34.42389382687304 18.70862764952255 26 16.946385494870846 36.343976997988406 28.78466478412601 17.924972723014736 27 17.97336737428897 33.38790986546964 31.916712466732903 16.722010293508482 28 15.515934361962211 30.175926402226562 37.87785054648729 16.430288689323937 29 16.36849244231222 27.32558296941458 37.18780373566097 19.11812085261223 30 18.322553396559986 30.463248492658906 33.24333507508955 17.97086303569156 31 26.27545287917717 27.82868428818575 27.85095259625459 18.04491023638249 32 25.380388727498175 29.918182581174413 28.444751583148104 16.256677108179304 33 24.823613340950132 29.5180298842048 27.061747513936307 18.596609260908764 34 18.910328433854325 29.976865326146108 29.472477995662754 21.64032824433681 35 20.272891685325117 27.951599933939608 31.44792735522892 20.32758102550635 36 25.078649768924 28.633186141396312 29.110296486616 17.17786760306369 37 19.434276679328242 33.07371689873538 29.942752173359793 17.549254248576588 38 19.35833430348252 33.98475466957621 26.7378756169472 19.91903540999407 39 21.740840212367914 30.905771891303583 28.42295706886796 18.930430827460544 40 21.8533323947704 29.176153823245137 28.472231622892636 20.498282159091833 41 17.47080753413346 27.946252832610007 30.255726813208828 24.327212820047706 42 20.781475475079798 28.104770697343234 27.444031416589283 23.669722410987685 43 21.533386217744795 27.228116818596543 28.086360424410937 23.15213653924772 44 18.97767483667651 31.738972111143898 29.339680365173177 19.94367268700641 45 18.56229305364158 35.48634255561662 25.991311975611804 19.960052415129994 46 21.410335202337023 33.48009659978503 26.674725673396342 18.434842524481603 47 20.660048895518994 29.630928175569025 28.423701601964485 21.285321326947496 48 21.44255317996854 27.756667632303532 31.30565384896537 19.49512533876256 49 20.33766606472294 27.83707720672841 31.653756914005072 20.171499814543576 50 18.832626252507723 32.45514526517562 29.18691571073129 19.52531277158537 51 19.056663029735297 32.78950831034305 27.567826965093584 20.586001694828067 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1761.0 1 2393.0 2 3025.0 3 13857.5 4 24690.0 5 16582.5 6 8475.0 7 8667.5 8 8860.0 9 9390.0 10 9920.0 11 10575.5 12 11231.0 13 11369.5 14 11508.0 15 11160.5 16 10813.0 17 10075.0 18 9337.0 19 8912.0 20 8487.0 21 8211.0 22 7935.0 23 8719.5 24 9504.0 25 11089.0 26 15707.5 27 18741.0 28 23745.5 29 28750.0 30 32712.5 31 36675.0 32 39911.5 33 43148.0 34 45755.5 35 48363.0 36 50982.5 37 53602.0 38 62817.5 39 72033.0 40 86100.5 41 100168.0 42 117968.0 43 135768.0 44 139813.5 45 143859.0 46 140449.5 47 137040.0 48 130588.5 49 124137.0 50 111271.0 51 98405.0 52 87468.5 53 76532.0 54 65595.5 55 54659.0 56 51031.0 57 47403.0 58 42109.0 59 36815.0 60 33610.5 61 30406.0 62 25720.5 63 21035.0 64 16588.5 65 12142.0 66 9765.0 67 7388.0 68 6115.5 69 4843.0 70 3875.0 71 2907.0 72 2565.5 73 2224.0 74 1733.0 75 886.0 76 530.0 77 356.0 78 182.0 79 141.0 80 100.0 81 96.0 82 92.0 83 52.0 84 12.0 85 10.5 86 9.0 87 6.5 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1477436.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.986026012938986 #Duplication Level Percentage of deduplicated Percentage of total 1 78.9978327970177 18.158462396380536 2 7.679259752609435 3.530313288671918 3 2.7793136313023643 1.916561262816962 4 1.500449755668774 1.3795750845964154 5 0.9389951553571578 1.0791883533531654 6 0.6805548736835767 0.938595121783386 7 0.498906231964299 0.8027510138164125 8 0.3861746879081556 0.7101297137436369 9 0.34126872763519167 0.7059970665742595 >10 4.211733830180857 22.862269512618543 >50 1.2412042113328212 20.230837355161725 >100 0.7365933262171632 25.00603374061589 >500 0.005933091632801734 0.9186435458284139 >1k 0.0014832729082004336 0.5997913174812002 >5k 0.0 0.0 >10k+ 2.9665458164008666E-4 1.1608512265575208 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17024 1.1522664941154812 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2057 0.13922768905049018 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2007 0.13584344770264162 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1758 0.11898992579035571 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1727 0.1168916961546896 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.76848269569714E-5 0.0 0.0 0.06524817318652043 0.0 2 6.76848269569714E-5 0.0 0.0 0.21307183526054596 0.0 3 6.76848269569714E-5 0.0 0.0 0.32705308385608584 0.0 4 6.76848269569714E-5 0.0 0.0 0.4650624460213505 0.0 5 6.76848269569714E-5 0.0 0.0 0.8344185467255434 0.0 6 6.76848269569714E-5 0.0 0.0 1.1449565328041282 0.0 7 6.76848269569714E-5 0.0 0.0 1.3453036205967637 0.0 8 6.76848269569714E-5 0.0 0.0 1.6879242146529527 0.0 9 6.76848269569714E-5 0.0 0.0 1.8220078568547131 0.0 10 6.76848269569714E-5 0.0 0.0 2.0612060353206503 0.0 11 6.76848269569714E-5 0.0 0.0 2.4817318652043134 0.0 12 6.76848269569714E-5 0.0 0.0 2.773724208696688 0.0 13 6.76848269569714E-5 0.0 0.0 2.9030699130114606 0.0 14 6.76848269569714E-5 0.0 0.0 2.95850378628922 0.0 15 6.76848269569714E-5 0.0 0.0 3.0385072517523604 0.0 16 6.76848269569714E-5 0.0 0.0 3.2171951949187645 0.0 17 6.76848269569714E-5 0.0 0.0 3.454971992018605 0.0 18 6.76848269569714E-5 0.0 0.0 3.7121066496281396 0.0 19 6.76848269569714E-5 0.0 0.0 3.8899146900441033 0.0 20 6.76848269569714E-5 0.0 0.0 4.057434636762608 0.0 21 6.76848269569714E-5 0.0 0.0 4.271995538216207 0.0 22 6.76848269569714E-5 0.0 0.0 4.515187121472605 0.0 23 6.76848269569714E-5 0.0 0.0 4.780308588663062 0.0 24 6.76848269569714E-5 0.0 0.0 4.9697584193156255 0.0 25 6.76848269569714E-5 0.0 0.0 5.139579650150666 0.0 26 6.76848269569714E-5 0.0 0.0 5.2974206666143235 0.0 27 6.76848269569714E-5 0.0 0.0 5.457766021675389 0.0 28 6.76848269569714E-5 0.0 0.0 5.628805579395656 0.0 29 6.76848269569714E-5 0.0 0.0 5.819541421760401 0.0 30 6.76848269569714E-5 0.0 0.0 6.044931895527116 0.0 31 6.76848269569714E-5 0.0 0.0 6.247444897782374 0.0 32 6.76848269569714E-5 0.0 0.0 6.431344572624465 0.0 33 6.76848269569714E-5 0.0 0.0 6.616124150216997 0.0 34 6.76848269569714E-5 0.0 0.0 6.818163358683557 0.0 35 6.76848269569714E-5 0.0 0.0 7.059730506092988 0.0 36 6.76848269569714E-5 0.0 0.0 7.280992205415328 0.0 37 6.76848269569714E-5 0.0 0.0 7.501577056468097 0.0 38 6.76848269569714E-5 0.0 0.0 7.720740526154771 0.0 39 6.76848269569714E-5 0.0 0.0 7.942746758573637 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGTC 30 2.1659234E-6 45.000004 44 TCGATAG 95 0.0 45.000004 1 CTTATCG 30 2.1659234E-6 45.000004 24 TTCGGCG 110 0.0 45.000004 33 GTTGCGA 30 2.1659234E-6 45.000004 9 GCGAACC 20 7.033942E-4 45.0 25 ATAATCG 20 7.033942E-4 45.0 1 TAGAACG 35 1.2122473E-7 45.0 1 TAGCGAT 40 6.8175723E-9 45.0 1 CCGGAAT 25 3.891348E-5 45.0 36 CCGTGCC 20 7.033942E-4 45.0 12 CCGTAAG 75 0.0 45.0 1 ACCGTGC 25 3.891348E-5 45.0 11 CGGTCTA 200 0.0 45.0 31 CGCAATA 20 7.033942E-4 45.0 41 TAGTCCG 25 3.891348E-5 45.0 11 TAGTACG 20 7.033942E-4 45.0 1 CGTTTTT 8015 0.0 43.905178 1 TTTAGCG 90 0.0 42.5 1 TATAGCG 80 0.0 42.1875 1 >>END_MODULE