##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547027_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1089879 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.41862353527318 31.0 31.0 33.0 30.0 34.0 2 31.838427018045124 31.0 31.0 34.0 30.0 34.0 3 31.98660768764239 33.0 31.0 34.0 30.0 34.0 4 35.730188397060594 37.0 35.0 37.0 35.0 37.0 5 35.647028706856446 37.0 35.0 37.0 33.0 37.0 6 35.70225410343717 37.0 35.0 37.0 33.0 37.0 7 36.041997322638565 37.0 35.0 37.0 35.0 37.0 8 36.043970018690146 37.0 35.0 37.0 35.0 37.0 9 37.88133545099961 39.0 38.0 39.0 35.0 39.0 10 37.11060860884557 39.0 37.0 39.0 33.0 39.0 11 36.89410567595118 39.0 37.0 39.0 33.0 39.0 12 36.350397612946026 38.0 35.0 39.0 32.0 39.0 13 36.13747030633676 38.0 35.0 39.0 32.0 39.0 14 37.10339496402812 39.0 35.0 41.0 32.0 41.0 15 37.365500206903704 39.0 35.0 41.0 32.0 41.0 16 37.467209662724024 39.0 35.0 41.0 33.0 41.0 17 37.42573625145544 39.0 35.0 41.0 33.0 41.0 18 37.32087048195258 39.0 35.0 41.0 32.0 41.0 19 37.27519752192675 39.0 35.0 41.0 32.0 41.0 20 37.114168637068886 39.0 35.0 41.0 32.0 41.0 21 37.00841928324154 39.0 35.0 41.0 32.0 41.0 22 36.93878678275295 39.0 35.0 41.0 32.0 41.0 23 36.924630165366985 38.0 35.0 41.0 32.0 41.0 24 36.86033862474642 38.0 35.0 41.0 32.0 41.0 25 36.79315777256007 38.0 35.0 41.0 32.0 41.0 26 36.6956129992412 38.0 35.0 41.0 31.0 41.0 27 36.6142039620912 38.0 35.0 41.0 31.0 41.0 28 36.57131296226462 38.0 35.0 40.0 31.0 41.0 29 36.6271200747973 38.0 35.0 41.0 31.0 41.0 30 36.58549343550981 38.0 35.0 41.0 31.0 41.0 31 36.48922036299442 38.0 35.0 41.0 31.0 41.0 32 36.393409727134845 38.0 35.0 41.0 30.0 41.0 33 36.2897404207256 38.0 35.0 41.0 30.0 41.0 34 36.19460050152357 38.0 35.0 41.0 30.0 41.0 35 36.11729375462781 38.0 35.0 41.0 30.0 41.0 36 36.031045648186634 38.0 35.0 41.0 30.0 41.0 37 36.01680920542556 38.0 35.0 41.0 30.0 41.0 38 35.96147921007745 38.0 35.0 41.0 30.0 41.0 39 35.90654925913794 38.0 35.0 41.0 30.0 41.0 40 35.79590853663572 38.0 35.0 41.0 29.0 41.0 41 35.768744970771984 38.0 35.0 40.0 29.0 41.0 42 35.732069339807445 38.0 35.0 40.0 29.0 41.0 43 35.648270129069374 38.0 35.0 40.0 29.0 41.0 44 35.513389100991944 38.0 34.0 40.0 28.0 41.0 45 35.42125869018487 38.0 34.0 40.0 28.0 41.0 46 35.40213179628197 38.0 34.0 40.0 28.0 41.0 47 35.36672970118701 38.0 34.0 40.0 28.0 41.0 48 35.30551281380777 37.0 34.0 40.0 28.0 41.0 49 35.24009270753909 37.0 34.0 40.0 27.0 41.0 50 35.153499608672156 37.0 34.0 40.0 27.0 41.0 51 34.812638834219214 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 0.0 12 2.0 13 3.0 14 8.0 15 23.0 16 64.0 17 147.0 18 367.0 19 627.0 20 1179.0 21 1981.0 22 3067.0 23 4520.0 24 6733.0 25 9883.0 26 13694.0 27 16770.0 28 18348.0 29 20430.0 30 24115.0 31 29704.0 32 37272.0 33 48822.0 34 86165.0 35 136318.0 36 70777.0 37 94579.0 38 151065.0 39 313033.0 40 176.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.453621915827355 23.315248756972103 28.970738953590256 14.260390373610282 2 30.21473025904711 25.1005845603044 31.67250676451239 13.012178416136102 3 29.01413826672502 24.35830032508196 33.30773416131515 13.319827246877864 4 25.8613112097765 27.487730289325697 32.57756136231637 14.07339713858144 5 24.532172837535178 32.24403809964225 30.018653446850525 13.205135615972049 6 21.235476598778398 41.519838440781044 26.72461805393076 10.520066906509804 7 89.62802292731578 3.225403920985724 5.933686216543305 1.212886935155187 8 91.05643837526918 1.9733383247131104 5.679713069065465 1.2905102309522434 9 87.54503940345671 3.191271691628153 7.306774421747736 1.9569144831673977 10 43.30343093132357 21.981981486018174 23.200373619456837 11.514213963201419 11 38.30709647584732 24.35830032508196 21.97583401460162 15.3587691844691 12 35.4423747957342 22.773812505791927 24.61254873247397 17.171263965999895 13 25.314369760312843 30.378418154675884 25.88443304256711 18.422779042444162 14 17.37541506901225 33.67548140665156 29.94662710264167 19.00247642169452 15 17.986216818564262 27.017953369135473 39.1849920954528 15.810837716847468 16 22.08933285254602 24.13277070206876 37.36185393057394 16.416042514811277 17 22.56736757016146 23.626842979817024 28.289011899486088 25.516777550535423 18 23.977065343951026 25.886176355356877 31.598094834380696 18.538663466311398 19 26.706817912814174 27.071445545789945 27.494244773961146 18.727491767434735 20 28.47572987460076 27.417447257906613 27.305966992666157 16.80085587482647 21 25.766988812519553 26.18226426970333 30.75818508293122 17.292561834845888 22 23.791631915102503 22.0408871076514 31.116481737880996 23.0509992393651 23 20.759093440647998 25.890029994155316 31.190434901489066 22.160441663707623 24 21.747735299056135 25.168482005800648 34.74495792652212 18.338824768621105 25 20.676331959786364 27.078510550253743 32.70344689639859 19.541710593561305 26 19.612360638199284 32.83199327631783 27.226233370860438 20.32941271462245 27 18.122195216166197 32.82511177846348 30.726346686191768 18.32634631917855 28 16.952799347450497 29.61530591928095 35.46980903384688 17.962085699421678 29 18.254870494798045 27.173016454120138 34.77165813819699 19.800454912884824 30 20.940856737307538 28.720894704825028 31.709208086402253 18.62904047146518 31 26.3101683764895 26.094639863691288 29.217371836690127 18.37781992312908 32 26.87802957943038 26.654518529121123 28.744658810748717 17.722793080699784 33 25.955817113642894 27.510301602287964 27.185678410172137 19.348202873897012 34 20.37620690003202 27.791158468050124 29.758257568041955 22.074377063875897 35 20.10993880972108 28.66409940920047 30.418973115364185 20.806988665714268 36 25.7344163893423 27.67609982392541 27.855294028052658 18.734189758679634 37 20.940122710869737 31.515792120042686 28.748420696242427 18.79566447284515 38 21.506974627458643 30.433837150729577 26.47009438662457 21.58909383518721 39 21.187764880321577 29.582366482884797 28.199919440598453 21.029949196195176 40 23.50682965723718 26.88316776449496 27.822905111484854 21.78709746678301 41 19.05917996401435 26.043258013045484 29.364268877554295 25.533293145385866 42 21.593956760337615 26.77572464466239 27.857220847451874 23.77309774754812 43 21.72066807416236 25.978663686519326 28.198084374503956 24.10258386481435 44 20.072778721307593 28.385811635970597 29.84744178023432 21.693967862487487 45 20.127188431009312 32.08337806306938 26.85564177307756 20.933791732843737 46 22.196317205854964 30.30859388978043 27.661878061693084 19.833210842671527 47 21.12390458023322 28.40315301056356 28.129636409179366 22.343306000023855 48 21.241991083413847 27.334594023740248 30.769562492717085 20.653852400128823 49 22.1469539279131 25.886635121880502 30.97830126096567 20.988109689240734 50 20.529159659008016 29.922220723584914 28.708140995468305 20.840478621938765 51 19.384353675958526 31.462575203302386 27.935211156467826 21.217859964271263 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 865.0 1 1572.5 2 2280.0 3 6572.0 4 10864.0 5 7654.0 6 4444.0 7 4510.5 8 4577.0 9 4621.5 10 4666.0 11 4717.5 12 4769.0 13 4411.0 14 4053.0 15 3833.0 16 3613.0 17 3306.0 18 2999.0 19 3297.5 20 3596.0 21 4026.0 22 4456.0 23 4604.0 24 4752.0 25 6508.0 26 9725.5 27 11187.0 28 12949.0 29 14711.0 30 16766.5 31 18822.0 32 23582.5 33 28343.0 34 31589.5 35 34836.0 36 37991.5 37 41147.0 38 47023.0 39 52899.0 40 63814.5 41 74730.0 42 82219.5 43 89709.0 44 93591.0 45 97473.0 46 96597.0 47 95721.0 48 93415.0 49 91109.0 50 86083.5 51 81058.0 52 75680.5 53 70303.0 54 61929.0 55 53555.0 56 48082.5 57 42610.0 58 40071.0 59 37532.0 60 33519.0 61 29506.0 62 25697.0 63 21888.0 64 17961.5 65 14035.0 66 11379.5 67 8724.0 68 7440.5 69 6157.0 70 5188.0 71 4219.0 72 3244.0 73 2269.0 74 1956.0 75 1262.5 76 882.0 77 583.0 78 284.0 79 215.5 80 147.0 81 125.0 82 103.0 83 73.0 84 43.0 85 30.0 86 17.0 87 12.5 88 8.0 89 8.5 90 9.0 91 5.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1089879.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.38376997682311 #Duplication Level Percentage of deduplicated Percentage of total 1 76.78486042144836 17.187346533761687 2 7.709099601831699 3.451174244316388 3 2.9431144632875155 1.9763399148506684 4 1.5829738341406607 1.4173168873093718 5 1.0139041384261975 1.1347498506540514 6 0.7777270738762873 1.0445078355836717 7 0.5685949960206402 0.8909109720629064 8 0.457944965958197 0.8200427824041897 9 0.3635506852261393 0.7323871421716494 >10 5.638371059704692 31.1494231688642 >50 1.7086864326288822 27.004651383048177 >100 0.44952420935958765 12.471403997197653 >500 0.0012360885683581698 0.1820575599780229 >1k 0.0 0.0 >5k 4.120295227860566E-4 0.5376877277973016 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5830 0.5349217665447265 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.175330472465291E-5 0.0 0.0 0.030829110387483382 0.0 2 9.175330472465291E-5 0.0 0.0 0.08826667914511611 0.0 3 9.175330472465291E-5 0.0 0.0 0.13001443279483318 0.0 4 9.175330472465291E-5 0.0 0.0 0.19121388704617667 0.0 5 9.175330472465291E-5 0.0 0.0 0.33389027589301196 0.0 6 9.175330472465291E-5 0.0 0.0 0.46197788928862743 0.0 7 9.175330472465291E-5 0.0 0.0 0.5411609912660029 0.0 8 9.175330472465291E-5 0.0 0.0 0.7176943495562351 0.0 9 9.175330472465291E-5 0.0 0.0 0.7749484117044185 0.0 10 9.175330472465291E-5 0.0 0.0 0.9015679722244396 0.0 11 9.175330472465291E-5 0.0 0.0 1.1010396566958351 0.0 12 9.175330472465291E-5 0.0 0.0 1.247477931036381 0.0 13 9.175330472465291E-5 0.0 0.0 1.310695957991667 0.0 14 9.175330472465291E-5 0.0 0.0 1.337396169666541 0.0 15 9.175330472465291E-5 0.0 0.0 1.3855666546469838 0.0 16 9.175330472465291E-5 0.0 0.0 1.488880875766943 0.0 17 9.175330472465291E-5 0.0 0.0 1.6089859516515137 0.0 18 9.175330472465291E-5 0.0 0.0 1.7407436972361152 0.0 19 9.175330472465291E-5 0.0 0.0 1.8249732309733466 0.0 20 9.175330472465291E-5 0.0 0.0 1.9202131612775364 0.0 21 9.175330472465291E-5 0.0 0.0 2.058026624973965 0.0 22 9.175330472465291E-5 0.0 0.0 2.1947390490136978 0.0 23 9.175330472465291E-5 0.0 0.0 2.3353968651565906 0.0 24 9.175330472465291E-5 0.0 0.0 2.4465101171781454 0.0 25 9.175330472465291E-5 0.0 0.0 2.558449148942222 0.0 26 9.175330472465291E-5 0.0 0.0 2.6567169383023255 0.0 27 9.175330472465291E-5 0.0 0.0 2.7712250625986923 0.0 28 9.175330472465291E-5 0.0 0.0 2.888669292646248 0.0 29 9.175330472465291E-5 0.0 0.0 3.027216782780474 0.0 30 9.175330472465291E-5 0.0 0.0 3.1766829161769334 0.0 31 9.175330472465291E-5 0.0 0.0 3.314863393092261 0.0 32 9.175330472465291E-5 0.0 0.0 3.4466211386768624 0.0 33 9.175330472465291E-5 0.0 0.0 3.573607712415782 0.0 34 9.175330472465291E-5 0.0 0.0 3.7207800131941253 0.0 35 9.175330472465291E-5 0.0 0.0 3.8962123318276616 0.0 36 9.175330472465291E-5 0.0 0.0 4.052468209773745 0.0 37 9.175330472465291E-5 0.0 0.0 4.20991688068125 0.0 38 9.175330472465291E-5 0.0 0.0 4.408654538714848 0.0 39 9.175330472465291E-5 0.0 0.0 4.729148832118061 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTT 75 0.0 45.000004 5 TCGGACG 35 1.2118471E-7 45.0 1 ACGTGCG 25 3.890672E-5 45.0 1 ACGTCGA 20 7.033127E-4 45.0 10 TCATACG 20 7.033127E-4 45.0 1 TAGGACG 25 3.890672E-5 45.0 1 CGTTTTT 3440 0.0 42.710754 1 ACGTAGG 195 0.0 41.53846 2 AGGGTAC 765 0.0 41.47059 6 CACGACG 110 0.0 40.909092 26 TACGTAG 50 1.0822987E-9 40.5 1 TAGGGCG 195 0.0 40.384617 5 GGCGATT 340 0.0 40.36765 8 TACGGGC 140 0.0 40.17857 4 CGAGGGT 280 0.0 40.17857 4 CGGGTAT 275 0.0 40.090908 6 AACGGGC 90 0.0 40.0 4 AGGGCGA 525 0.0 39.857143 6 CGTTAGG 215 0.0 39.76744 2 GCGGGAT 410 0.0 39.51219 5 >>END_MODULE