##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547025_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1344918 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.37902756896703 31.0 31.0 33.0 30.0 34.0 2 31.77742063084887 31.0 31.0 34.0 30.0 34.0 3 31.89128333474606 31.0 31.0 34.0 30.0 34.0 4 35.66422042087324 37.0 35.0 37.0 33.0 37.0 5 35.57750063572649 37.0 35.0 37.0 33.0 37.0 6 35.63626406963101 37.0 35.0 37.0 33.0 37.0 7 35.95511250500031 37.0 35.0 37.0 35.0 37.0 8 35.93186499102548 37.0 35.0 37.0 35.0 37.0 9 37.67486939724206 39.0 37.0 39.0 35.0 39.0 10 37.13660163667971 39.0 37.0 39.0 33.0 39.0 11 36.891333151909635 39.0 37.0 39.0 33.0 39.0 12 36.37471726900822 38.0 35.0 39.0 32.0 39.0 13 36.182095860119354 39.0 35.0 39.0 32.0 39.0 14 37.22492895477642 39.0 35.0 41.0 32.0 41.0 15 37.410299363976094 39.0 35.0 41.0 32.0 41.0 16 37.48208887084566 39.0 35.0 41.0 32.0 41.0 17 37.418146682548674 39.0 35.0 41.0 32.0 41.0 18 37.281383697742164 39.0 35.0 41.0 32.0 41.0 19 37.24167570067469 39.0 35.0 41.0 32.0 41.0 20 37.09237366144256 39.0 35.0 41.0 32.0 41.0 21 36.981323768437925 39.0 35.0 41.0 32.0 41.0 22 36.896071730767225 39.0 35.0 41.0 31.0 41.0 23 36.858375008736594 38.0 35.0 41.0 31.0 41.0 24 36.768286244960656 38.0 35.0 41.0 31.0 41.0 25 36.68721513133143 38.0 35.0 41.0 31.0 41.0 26 36.56437864613307 38.0 35.0 41.0 31.0 41.0 27 36.46945538687117 38.0 35.0 40.0 31.0 41.0 28 36.37425627436022 38.0 35.0 40.0 30.0 41.0 29 36.405787564743726 38.0 35.0 40.0 30.0 41.0 30 36.36839346339331 38.0 35.0 40.0 30.0 41.0 31 36.29771852261625 38.0 35.0 40.0 30.0 41.0 32 36.18102441933263 38.0 35.0 41.0 30.0 41.0 33 36.06419350473412 38.0 35.0 41.0 30.0 41.0 34 35.925580593017564 38.0 35.0 41.0 29.0 41.0 35 35.8449890625302 38.0 35.0 41.0 29.0 41.0 36 35.74889770231345 38.0 35.0 41.0 29.0 41.0 37 35.72860129762558 38.0 35.0 41.0 29.0 41.0 38 35.667170786620446 38.0 35.0 41.0 29.0 41.0 39 35.59782455138529 38.0 35.0 40.0 28.0 41.0 40 35.469164662827026 38.0 35.0 40.0 27.0 41.0 41 35.40892530250915 38.0 34.0 40.0 27.0 41.0 42 35.36721718350115 38.0 34.0 40.0 27.0 41.0 43 35.27569264445862 38.0 34.0 40.0 27.0 41.0 44 35.160185230623725 38.0 34.0 40.0 27.0 41.0 45 35.055662129587084 37.0 34.0 40.0 26.0 41.0 46 35.0145860193707 37.0 34.0 40.0 26.0 41.0 47 34.98869745218668 37.0 34.0 40.0 26.0 41.0 48 34.89490437335213 37.0 34.0 40.0 26.0 41.0 49 34.81012745758478 37.0 34.0 40.0 26.0 41.0 50 34.72941324303787 37.0 34.0 40.0 26.0 41.0 51 34.36770345850081 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 3.0 10 5.0 11 5.0 12 5.0 13 6.0 14 25.0 15 30.0 16 124.0 17 275.0 18 607.0 19 1125.0 20 1914.0 21 2991.0 22 4580.0 23 6719.0 24 10033.0 25 14226.0 26 19031.0 27 22393.0 28 24414.0 29 27668.0 30 31654.0 31 38005.0 32 47820.0 33 61479.0 34 103078.0 35 154020.0 36 95765.0 37 125851.0 38 190678.0 39 360162.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.28695727174445 23.140146834230784 25.048218553101382 14.524677340923386 2 34.05583091311143 24.726117131304658 27.346351227361072 13.871700728222836 3 29.926434176656123 24.918024742028884 30.607442238114146 14.54809884320085 4 26.76445701522323 26.753006502998694 30.56677061352439 15.91576586825368 5 23.349453275218266 30.717114351953057 30.033355193402127 15.900077179426553 6 22.4264230235598 39.485306910904605 27.538407546036265 10.54986251949933 7 84.06185358512563 4.857768280296643 8.428394890989637 2.651983243588085 8 84.63259470094087 3.9785325201982573 8.555242773165354 2.8336300056955146 9 79.77571866835004 6.211382403982993 10.208429064076768 3.8044698635901963 10 42.547872807115375 29.473618465958516 16.638560863933712 11.33994786299239 11 36.04665860669572 24.55242624457402 24.018192930721426 15.38272221800883 12 32.81902688491046 22.930245561439435 27.52361110491495 16.727116448735167 13 24.21679239923921 29.357551910227986 28.14922545463738 18.276430235895422 14 18.371157200662047 32.9782931003972 30.246899810992193 18.40364988794856 15 17.27458477022391 26.769364377605175 38.52190245055833 17.43414840161259 16 21.46286985526255 24.352488404497524 37.025677401893645 17.158964338346276 17 22.24366095182011 24.15857323643523 28.392660370372024 25.205105441372634 18 23.15248959416113 26.276546228097175 31.891237978821014 18.679726198920676 19 27.150800271838133 26.8710806160673 26.8162073821601 19.161911729934463 20 28.76829665451723 26.354320486453446 27.295716170056465 17.58166668897286 21 25.44571490603888 26.955472378241645 29.651473175316262 17.947339540403206 22 23.97685212035232 22.810312598983728 29.911117257706415 23.301718022957534 23 21.26285766121057 27.074810508893478 29.48268965096757 22.17964217892838 24 21.401527825488245 25.001226840595486 33.94675363107639 19.650491702839876 25 20.88186789083052 26.168658609669883 32.04202784110258 20.907445658397016 26 19.863441488626073 31.54757390413393 27.615735680539633 20.973248926700364 27 19.910953678960354 30.390254275725358 30.173884207066898 19.524907838247387 28 18.243045300903105 27.385833188343085 34.54158543494845 19.829536075805365 29 19.48966405386797 26.328370949009532 33.630228757440975 20.551736239681528 30 20.920531958082204 27.43022251170703 31.47232768094412 20.176917849266644 31 26.10530902255751 25.878752459257736 27.533202767752385 20.48273575043237 32 26.142188594397574 26.54288216828089 27.998063822478397 19.316865414843136 33 25.46519564761569 26.530539408350545 27.402414124876014 20.60185081915775 34 20.976594855597146 27.473868295316144 28.86517988457289 22.68435696451382 35 21.039498318856616 27.092581109034157 30.176114826331418 21.69180574577781 36 25.488617149893155 27.62183270652932 27.25088072283961 19.63866942073792 37 21.785640462838625 30.90032254754565 27.89396825680079 19.420068732814936 38 20.879116793737612 31.677693361230947 25.88484948524743 21.55834035978402 39 21.61410584139702 29.713484390869926 27.352671315277217 21.319738452455837 40 23.49719462450499 27.156376819999434 27.479593551428415 21.866835004067163 41 19.65041734886439 26.303462367222387 29.39160603099966 24.65451425291356 42 21.16597443115491 27.602798088805415 27.05049675891021 24.180730721129468 43 21.90259926627497 26.232528674610645 27.916720573298893 23.94815148581549 44 20.291869095364923 28.283806150263434 29.309742303991765 22.114582450379874 45 20.97577696186682 31.17773723007648 26.20836363257834 21.638122175478355 46 22.006620477977094 29.981009994661385 27.202104514922098 20.81026501243942 47 21.082177500784436 28.2853675837486 28.137923650363817 22.494531265103152 48 22.124992006947636 26.61612083413264 29.883829348703788 21.37505781021594 49 21.196087791225935 26.260708831319086 30.440517563152547 22.102685814302433 50 19.869389806664792 29.513323488866977 29.22996048829743 21.3873262161708 51 19.925675766106185 30.409214539473783 27.27861475569514 22.386494938724887 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1233.0 1 2108.5 2 2984.0 3 8521.0 4 14058.0 5 10049.0 6 6040.0 7 6129.5 8 6219.0 9 6357.0 10 6495.0 11 6362.5 12 6230.0 13 6096.5 14 5963.0 15 5886.5 16 5810.0 17 6013.5 18 6217.0 19 6033.0 20 5849.0 21 6536.0 22 7223.0 23 8291.0 24 9359.0 25 9954.0 26 12858.5 27 15168.0 28 17969.0 29 20770.0 30 22840.0 31 24910.0 32 29230.5 33 33551.0 34 38015.0 35 42479.0 36 44850.5 37 47222.0 38 53482.0 39 59742.0 40 69786.5 41 79831.0 42 89169.5 43 98508.0 44 104090.5 45 109673.0 46 108388.0 47 107103.0 48 105012.0 49 102921.0 50 99436.5 51 95952.0 52 86334.0 53 76716.0 54 71460.5 55 66205.0 56 61423.0 57 56641.0 58 54497.0 59 52353.0 60 48608.0 61 44863.0 62 40151.5 63 35440.0 64 30704.0 65 25968.0 66 22811.5 67 19655.0 68 16418.5 69 13182.0 70 10938.5 71 8695.0 72 7258.5 73 5822.0 74 4707.5 75 2849.0 76 2105.0 77 1462.5 78 820.0 79 609.0 80 398.0 81 343.0 82 288.0 83 171.0 84 54.0 85 41.5 86 29.0 87 25.5 88 22.0 89 14.0 90 6.0 91 3.0 92 0.0 93 0.5 94 1.0 95 1.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1344918.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.21622240274284 #Duplication Level Percentage of deduplicated Percentage of total 1 79.84531981977116 17.73861382934167 2 5.670561150363087 2.5195689532963925 3 2.0139809623185263 1.3422914692127526 4 1.1483461145816076 1.0204765070748243 5 0.8080045885855723 0.8975404821226902 6 0.6045510046450229 0.8058503743797268 7 0.5207778438105152 0.8098801480360694 8 0.42847393558353614 0.7615257797361878 9 0.40293028756142235 0.8056429993139118 >10 6.443584443101311 35.28014883887212 >50 1.780972242915702 27.600165372828165 >100 0.32945955756368167 9.456356091594579 >500 0.002700488176750683 0.3686670992439714 >1k 0.0 0.0 >5k 3.375610220938354E-4 0.5932720549469197 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7911 0.588214300053981 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4870795096801442E-4 0.0 0.0 0.048330084064604685 0.0 2 1.4870795096801442E-4 0.0 0.0 0.1516077560118907 0.0 3 1.4870795096801442E-4 0.0 0.0 0.22425159005976572 0.0 4 1.4870795096801442E-4 0.0 0.0 0.34210264120191713 0.0 5 1.4870795096801442E-4 0.0 0.0 0.6218966509482362 0.0 6 1.4870795096801442E-4 0.0 0.0 0.9265992424816978 0.0 7 1.4870795096801442E-4 0.0 0.0 1.0998440053594345 0.0 8 1.4870795096801442E-4 0.0 0.0 1.4310166121652026 0.0 9 1.4870795096801442E-4 0.0 0.0 1.558087556267371 0.0 10 1.4870795096801442E-4 0.0 0.0 1.7525232021580497 0.0 11 1.4870795096801442E-4 0.0 0.0 1.9985605070346297 0.0 12 1.4870795096801442E-4 0.0 0.0 2.18950151607756 0.0 13 1.4870795096801442E-4 0.0 0.0 2.2737445703009405 0.0 14 1.4870795096801442E-4 0.0 0.0 2.312111221650688 0.0 15 1.4870795096801442E-4 0.0 0.0 2.364530774366913 0.0 16 1.4870795096801442E-4 0.0 0.0 2.466618782706455 0.0 17 1.4870795096801442E-4 0.0 0.0 2.5794881174911777 0.0 18 1.4870795096801442E-4 0.0 0.0 2.714514936970135 0.0 19 1.4870795096801442E-4 0.0 0.0 2.7993528229973874 0.0 20 1.4870795096801442E-4 0.0 0.0 2.902853556871125 0.0 21 1.4870795096801442E-4 0.0 0.0 3.0303706248261975 0.0 22 1.4870795096801442E-4 0.0 0.0 3.165769214182575 0.0 23 1.4870795096801442E-4 0.0 0.0 3.3115773601067127 0.0 24 1.4870795096801442E-4 0.0 0.0 3.426231190303052 0.0 25 1.4870795096801442E-4 0.0 0.0 3.5277243668387217 0.0 26 1.4870795096801442E-4 0.0 0.0 3.6305559149331037 0.0 27 1.4870795096801442E-4 0.0 0.0 3.7362129140958777 0.0 28 1.4870795096801442E-4 0.0 0.0 3.8509410982677013 0.0 29 1.4870795096801442E-4 0.0 0.0 3.960836274033064 0.0 30 1.4870795096801442E-4 0.0 0.0 4.095342615683633 0.0 31 1.4870795096801442E-4 0.0 0.0 4.225462072780646 0.0 32 1.4870795096801442E-4 0.0 0.0 4.343313123922797 0.0 33 1.4870795096801442E-4 0.0 0.0 4.470978899828837 0.0 34 1.4870795096801442E-4 0.0 0.0 4.5952243928626135 0.0 35 1.4870795096801442E-4 0.0 0.0 4.738950627473199 0.0 36 1.4870795096801442E-4 0.0 0.0 4.8773233758489365 0.0 37 1.4870795096801442E-4 0.0 0.0 5.013316797009185 0.0 38 1.4870795096801442E-4 0.0 0.0 5.168567897819793 0.0 39 1.4870795096801442E-4 0.0 0.0 5.37058764920984 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAATA 25 3.891161E-5 45.0 2 GCGATAC 25 3.891161E-5 45.0 9 CGGTCTA 255 0.0 43.235294 31 TATAGCG 100 0.0 42.75 1 CACGACG 260 0.0 42.40385 26 CGTTTTT 4715 0.0 41.6596 1 AATGCGG 170 0.0 41.029415 2 TCACGAC 270 0.0 40.833336 25 AAATGCG 95 0.0 40.26316 1 ACGGGAT 420 0.0 40.17857 5 TAATACG 45 1.9286745E-8 40.0 1 TTACGCG 45 1.9286745E-8 40.0 1 TACGGGA 370 0.0 39.52703 4 ACGGGTA 120 0.0 39.374996 5 TATACGG 120 0.0 39.374996 2 CGGGATT 335 0.0 38.955223 6 AATACGG 110 0.0 38.86364 2 CGACGGT 290 0.0 38.793102 28 CTCACGA 285 0.0 38.68421 24 GTCGTTA 35 6.2490817E-6 38.571426 32 >>END_MODULE