SRR1547024_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547024_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1734937
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8387	0.4834181298802204	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTTACG	30	2.1661435E-6	45.000004	1
CGGTACG	30	2.1661435E-6	45.000004	12
TCGAATA	30	2.1661435E-6	45.000004	1
TAATCGT	35	1.212411E-7	45.000004	21
CTATGCG	55	1.8189894E-12	45.0	1
ATTACCG	50	2.1827873E-11	45.0	1
TCTTACG	45	3.8562575E-10	45.0	1
TAAGTCG	20	7.0342823E-4	45.0	1
TACGGGT	165	0.0	45.0	4
ACGGGTA	90	0.0	45.0	5
TACGATT	40	6.8193913E-9	45.0	33
ATAACGG	95	0.0	45.0	2
CGCGTAC	25	3.891631E-5	45.0	17
TAGCTAC	25	3.891631E-5	45.0	28
ATCGATT	20	7.0342823E-4	45.0	17
TACGTAA	40	6.8193913E-9	45.0	45
CGGGTGC	140	0.0	43.39286	6
TAGTACG	110	0.0	42.954544	1
CGTTTTT	4885	0.0	41.960083	1
CGATTCA	60	3.6379788E-12	41.250004	10