##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547023_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1145752 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.454092159559835 31.0 31.0 33.0 30.0 34.0 2 31.859108253793142 31.0 31.0 34.0 30.0 34.0 3 31.976749767838065 33.0 31.0 34.0 30.0 34.0 4 35.71976745403892 37.0 35.0 37.0 33.0 37.0 5 35.62903665016513 37.0 35.0 37.0 33.0 37.0 6 35.682039394214456 37.0 35.0 37.0 33.0 37.0 7 36.02842325389788 37.0 35.0 37.0 35.0 37.0 8 36.02387864040386 37.0 35.0 37.0 35.0 37.0 9 37.83028002569492 39.0 38.0 39.0 35.0 39.0 10 37.25009077007939 39.0 37.0 39.0 34.0 39.0 11 36.91968680831454 39.0 37.0 39.0 33.0 39.0 12 36.04772760597407 37.0 35.0 39.0 32.0 39.0 13 35.666867699118136 37.0 35.0 39.0 31.0 39.0 14 36.58253967699817 38.0 35.0 41.0 31.0 41.0 15 36.91215289172526 38.0 35.0 41.0 32.0 41.0 16 37.049741130715894 38.0 35.0 41.0 32.0 41.0 17 36.98971854293076 38.0 35.0 41.0 32.0 41.0 18 36.92373218637192 38.0 35.0 41.0 32.0 41.0 19 36.8943820303172 38.0 35.0 41.0 32.0 41.0 20 36.7364490744943 38.0 35.0 41.0 32.0 41.0 21 36.615126135498784 38.0 35.0 41.0 31.0 41.0 22 36.54371801227491 38.0 35.0 41.0 31.0 41.0 23 36.567449151299755 38.0 35.0 40.0 31.0 41.0 24 36.4590696765094 38.0 35.0 40.0 31.0 41.0 25 36.389876692338305 38.0 35.0 40.0 31.0 41.0 26 36.26199823347461 38.0 35.0 40.0 31.0 41.0 27 36.18447360336268 37.0 35.0 40.0 31.0 41.0 28 36.1556820324119 37.0 35.0 40.0 31.0 41.0 29 36.207493419169246 37.0 35.0 40.0 31.0 41.0 30 36.19527437002074 37.0 35.0 40.0 31.0 41.0 31 36.05724973641765 37.0 35.0 40.0 30.0 41.0 32 35.96670134549187 38.0 35.0 40.0 30.0 41.0 33 35.86473948987216 38.0 35.0 40.0 30.0 41.0 34 35.767213149093344 38.0 35.0 40.0 30.0 41.0 35 35.727437525747284 38.0 35.0 40.0 30.0 41.0 36 35.60528543698811 37.0 35.0 40.0 29.0 41.0 37 35.601459129026175 37.0 34.0 40.0 29.0 41.0 38 35.56756959621279 37.0 34.0 40.0 29.0 41.0 39 35.531455323665156 37.0 35.0 40.0 29.0 41.0 40 35.38434320865248 37.0 34.0 40.0 29.0 41.0 41 35.39498425488238 37.0 34.0 40.0 29.0 41.0 42 35.3399985337141 37.0 34.0 40.0 29.0 41.0 43 35.23896794419735 37.0 34.0 40.0 28.0 41.0 44 35.09259333607971 36.0 34.0 40.0 28.0 41.0 45 35.004495737297425 36.0 34.0 40.0 27.0 41.0 46 35.01320006423729 36.0 34.0 40.0 27.0 41.0 47 34.99624700633296 36.0 34.0 40.0 28.0 41.0 48 34.938982432498484 36.0 34.0 40.0 28.0 41.0 49 34.91328140819305 36.0 34.0 40.0 27.0 41.0 50 34.8160937096335 36.0 34.0 40.0 27.0 41.0 51 34.45680217010313 35.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 3.0 12 6.0 13 6.0 14 18.0 15 35.0 16 79.0 17 171.0 18 407.0 19 807.0 20 1460.0 21 2358.0 22 3702.0 23 5384.0 24 7851.0 25 11426.0 26 15052.0 27 17794.0 28 19939.0 29 22921.0 30 27327.0 31 33599.0 32 42816.0 33 56547.0 34 105900.0 35 176263.0 36 70738.0 37 92868.0 38 143287.0 39 286743.0 40 240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.53941167023928 24.052587296378274 28.2136099260573 13.194391107325146 2 31.520171904565736 24.356754341253605 30.88879617927789 13.234277574902773 3 29.50856729903155 24.74436003602874 32.0752658515979 13.671806813341805 4 26.184724093870226 27.37197927649264 30.89010536311523 15.553191266521901 5 24.01383545479301 31.53911143074592 29.33976986293718 15.10728325152389 6 22.380148583637645 40.67913475167401 26.449790181470334 10.49092648321801 7 87.8158624204889 3.993097982809543 6.289842828116381 1.9011967685851738 8 88.93355630188732 2.888059545172079 6.318993988227819 1.8593901647127826 9 85.18431562851298 4.743871274062799 7.226869339961876 2.8449437574623477 10 50.643245658746395 24.839668619387094 13.384659158351894 11.132426563514617 11 45.06140944986349 21.749820205419674 20.4320830336757 12.756687311041132 12 41.34428741996523 21.497235003735536 22.855207758747092 14.303269817552142 13 24.62609709605569 34.43380417402719 23.97848749118483 16.961611238732292 14 16.654389431569832 36.93469441903658 28.637349094743016 17.77356705465057 15 17.05098485536137 25.52611734476571 42.346249450142786 15.076648349730135 16 20.69976748895049 21.94453948149338 40.615770253946756 16.73992277560938 17 21.325557363199017 21.2225682346616 27.820331101320356 29.631543300819025 18 24.25428888625113 24.855640662202642 32.04882033808364 18.8412501134626 19 28.981751722885928 26.911495681438915 25.62552803748106 18.481224558194096 20 32.1710108295687 25.701198863279313 25.474535501574515 16.653254805577472 21 25.324939428427797 27.056116856003744 28.671387874513854 18.94755584105461 22 22.663543244960515 23.40270843952269 29.013608529594535 24.92013978592226 23 21.381764989282146 27.373550297097456 28.403267024626622 22.84141768899378 24 22.37822844734288 24.00187824241197 36.029001040364754 17.590892269880392 25 20.76356838129019 25.290202417277037 33.20421871399745 20.742010487435326 26 18.396040329844503 33.6448027147236 26.927555003176952 21.03160195225494 27 17.350787954112235 33.25222212136658 30.374636046893222 19.022353877627967 28 16.539879485263825 29.099752826091514 36.140107108693684 18.220260579950985 29 17.97422129745355 26.822733017267264 34.97929743958553 20.223748245693656 30 20.789402942347035 29.038744859271464 31.314019089645928 18.857833108735573 31 29.050614792730016 26.572417067567848 26.93541010620099 17.441558033501142 32 30.10948268037062 26.18175661050559 26.998338209315804 16.710422499807986 33 28.37341763313527 27.53606365077259 25.06135708251 19.029161633582138 34 20.803891243480265 28.07780392266389 28.449437574623477 22.668867259232364 35 20.898763432226172 27.024871001752558 30.937759654794405 21.13860591122686 36 27.648304345093877 27.692554758795968 26.8797261536528 17.779414742457355 37 20.923288809445676 33.060994002192444 27.75155531039876 18.26416187796312 38 21.494092962525922 32.82961757867322 23.907966121813445 21.76832333698741 39 21.62544774087237 30.92711162625071 26.67322422304303 20.77421640983389 40 25.243857309435203 25.7545262849203 25.960591820917617 23.041024584726888 41 18.828856506469112 25.316386094023834 28.543000579532045 27.311756819975002 42 21.77478197725162 25.44337692624582 25.698755053449613 27.083086043052944 43 21.92944022790272 24.771067386310474 26.632028571628062 26.667463814158737 44 20.130883472165007 29.36726272352132 28.64764800759676 21.854205796716915 45 19.788924653851794 34.44803063839295 24.62321689161354 21.13982781614171 46 22.250277546973514 32.31554472521104 25.459087132293902 19.975090595521543 47 20.526169712119202 29.17603460434719 26.703771845914297 23.59402383761931 48 21.435790642303047 25.812566768375707 31.74255859906856 21.009083990252687 49 21.677291420831036 25.551951905822552 30.834421410567032 21.93633526277938 50 19.773999958106117 31.08395184996404 27.871214713131636 21.270833478798203 51 18.888817126219287 32.61421319796954 26.63455966038026 21.862410015430914 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 992.0 1 1670.0 2 2348.0 3 5678.5 4 9009.0 5 6464.5 6 3920.0 7 3947.5 8 3975.0 9 4251.0 10 4527.0 11 4490.0 12 4453.0 13 4353.5 14 4254.0 15 3957.0 16 3660.0 17 3516.5 18 3373.0 19 3474.0 20 3575.0 21 3759.5 22 3944.0 23 5164.0 24 6384.0 25 6516.0 26 8778.0 27 10908.0 28 12221.0 29 13534.0 30 14821.5 31 16109.0 32 19301.5 33 22494.0 34 27306.5 35 32119.0 36 33449.5 37 34780.0 38 42253.0 39 49726.0 40 62906.0 41 76086.0 42 89657.0 43 103228.0 44 107331.5 45 111435.0 46 108616.0 47 105797.0 48 99655.5 49 93514.0 50 87494.5 51 81475.0 52 75451.0 53 69427.0 54 62852.5 55 56278.0 56 52578.5 57 48879.0 58 46363.5 59 43848.0 60 40363.5 61 36879.0 62 31935.5 63 26992.0 64 23012.5 65 19033.0 66 15340.5 67 11648.0 68 9612.0 69 7576.0 70 6453.5 71 5331.0 72 4473.0 73 3615.0 74 2782.5 75 1441.0 76 932.0 77 755.0 78 578.0 79 389.0 80 200.0 81 156.5 82 113.0 83 124.5 84 136.0 85 84.0 86 32.0 87 30.5 88 29.0 89 17.0 90 5.0 91 3.0 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1145752.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.155655176080685 #Duplication Level Percentage of deduplicated Percentage of total 1 80.63849829614365 15.446832672778973 2 6.490758975111426 2.486694815165707 3 1.9818678067272728 1.1389192893072886 4 1.01239399136678 0.7757228080383218 5 0.6670061597819638 0.6388469998552537 6 0.49417860808513275 0.5679789007124593 7 0.4059172686472319 0.5442927859756017 8 0.334958213217172 0.5133075224627407 9 0.29270039376082785 0.504618103150691 >10 4.758820829693433 22.60535174034952 >50 1.8193557847519297 24.81739372232615 >100 1.100790549205437 29.26891066255154 >500 0.002294269589840427 0.2759949292640141 >1k 4.5885391796808545E-4 0.4151350480617638 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4723 0.4122183509171269 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03403877977084046 0.0 2 0.0 0.0 0.0 0.11014600018154017 0.0 3 0.0 0.0 0.0 0.15823668647316347 0.0 4 0.0 0.0 0.0 0.246301119264902 0.0 5 0.0 0.0 0.0 0.43988576934624596 0.0 6 0.0 0.0 0.0 0.6127853147976177 0.0 7 0.0 0.0 0.0 0.7204002262269671 0.0 8 0.0 0.0 0.0 0.9431360364197487 0.0 9 0.0 0.0 0.0 1.0060641395345589 0.0 10 0.0 0.0 0.0 1.1433538846102822 0.0 11 0.0 0.0 0.0 1.351775951514813 0.0 12 0.0 0.0 0.0 1.5040776712587016 0.0 13 0.0 0.0 0.0 1.568314958210852 0.0 14 0.0 0.0 0.0 1.5976406761672683 0.0 15 0.0 0.0 0.0 1.6422402055593182 0.0 16 0.0 0.0 0.0 1.7455784497866904 0.0 17 0.0 0.0 0.0 1.8579064230304638 0.0 18 0.0 0.0 0.0 2.007502496177183 0.0 19 0.0 0.0 0.0 2.098534412333559 0.0 20 0.0 0.0 0.0 2.200301635956123 0.0 21 0.0 0.0 0.0 2.334623897667209 0.0 22 0.0 0.0 0.0 2.474182894727655 0.0 23 0.0 0.0 0.0 2.624564478176778 0.0 24 0.0 0.0 0.0 2.7347977572808078 0.0 25 0.0 0.0 0.0 2.8335974975387344 0.0 26 0.0 0.0 0.0 2.9332700270215546 0.0 27 0.0 0.0 0.0 3.0416704487533077 0.0 28 0.0 0.0 0.0 3.1571404632066975 0.0 29 0.0 0.0 0.0 3.2877097312507417 0.0 30 0.0 0.0 0.0 3.4373058043974614 0.0 31 0.0 0.0 0.0 3.5697079298137817 0.0 32 0.0 0.0 0.0 3.691374747763914 0.0 33 0.0 0.0 0.0 3.8230786418003198 0.0 34 0.0 0.0 0.0 3.9682234899000832 0.0 35 0.0 0.0 0.0 4.138155551986817 0.0 36 0.0 0.0 0.0 4.292202850180493 0.0 37 0.0 0.0 0.0 4.450701373421125 0.0 38 0.0 0.0 0.0 4.637740104315768 0.0 39 0.0 0.0 0.0 4.925585990685593 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 25 3.8907972E-5 45.000004 16 CCTACGG 25 3.8907972E-5 45.000004 2 TCGCGAC 25 3.8907972E-5 45.000004 19 CTATGCG 40 6.8157533E-9 45.0 1 GGTACGA 20 7.033277E-4 45.0 8 TACCCGA 20 7.033277E-4 45.0 39 ACGTTAT 20 7.033277E-4 45.0 38 CGCATAA 20 7.033277E-4 45.0 27 CGCGCTA 20 7.033277E-4 45.0 28 CCTACCG 20 7.033277E-4 45.0 1 TTCGTAA 20 7.033277E-4 45.0 40 CGTCTAT 20 7.033277E-4 45.0 13 ATGTCGC 20 7.033277E-4 45.0 35 CCCCGTA 20 7.033277E-4 45.0 38 GCCGAAT 20 7.033277E-4 45.0 21 TCTACCG 20 7.033277E-4 45.0 45 TCCGTAC 20 7.033277E-4 45.0 12 CAATCGC 20 7.033277E-4 45.0 26 CGTTTCA 20 7.033277E-4 45.0 20 ATCGCGT 20 7.033277E-4 45.0 30 >>END_MODULE