##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547021_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1809159 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.385569206465547 31.0 31.0 33.0 30.0 34.0 2 31.797882330961514 31.0 31.0 34.0 30.0 34.0 3 31.887709703790545 31.0 31.0 34.0 30.0 34.0 4 35.66520742510747 37.0 35.0 37.0 33.0 37.0 5 35.56294443993038 37.0 35.0 37.0 33.0 37.0 6 35.63522498575305 37.0 35.0 37.0 33.0 37.0 7 36.03739195946846 37.0 35.0 37.0 35.0 37.0 8 36.04374131848002 37.0 35.0 37.0 35.0 37.0 9 37.85873104575109 39.0 38.0 39.0 35.0 39.0 10 37.08325912758359 39.0 37.0 39.0 33.0 39.0 11 36.88436781952277 39.0 37.0 39.0 33.0 39.0 12 36.38744797997302 38.0 35.0 39.0 32.0 39.0 13 36.14448315488025 39.0 35.0 39.0 32.0 39.0 14 37.0978631507789 39.0 35.0 41.0 31.0 41.0 15 37.359955095157474 39.0 35.0 41.0 32.0 41.0 16 37.45875017065941 39.0 35.0 41.0 32.0 41.0 17 37.41633709364406 39.0 35.0 41.0 32.0 41.0 18 37.29409244848021 39.0 35.0 41.0 32.0 41.0 19 37.23388878478895 39.0 35.0 41.0 32.0 41.0 20 37.0650075532333 39.0 35.0 41.0 32.0 41.0 21 36.96786794306084 39.0 35.0 41.0 32.0 41.0 22 36.903316955557806 38.0 35.0 41.0 32.0 41.0 23 36.89395238340024 38.0 35.0 41.0 32.0 41.0 24 36.793560433328416 38.0 35.0 41.0 32.0 41.0 25 36.73588833264517 38.0 35.0 41.0 31.0 41.0 26 36.63235569676297 38.0 35.0 41.0 31.0 41.0 27 36.55366388471107 38.0 35.0 40.0 31.0 41.0 28 36.5081189657736 38.0 35.0 40.0 31.0 41.0 29 36.54071145764413 38.0 35.0 40.0 31.0 41.0 30 36.5153405532626 38.0 35.0 40.0 31.0 41.0 31 36.39777819417752 38.0 35.0 40.0 31.0 41.0 32 36.274808902921194 38.0 35.0 41.0 30.0 41.0 33 36.141979781766004 38.0 35.0 41.0 30.0 41.0 34 36.007625642632846 38.0 35.0 41.0 30.0 41.0 35 35.909745909563505 38.0 35.0 41.0 30.0 41.0 36 35.79582778517532 38.0 35.0 41.0 29.0 41.0 37 35.747765674548226 38.0 35.0 41.0 29.0 41.0 38 35.69703602613148 38.0 35.0 41.0 29.0 41.0 39 35.64732453034808 38.0 35.0 41.0 29.0 41.0 40 35.53500328052979 38.0 35.0 40.0 27.0 41.0 41 35.50114777087033 38.0 35.0 40.0 27.0 41.0 42 35.44793133162978 38.0 35.0 40.0 27.0 41.0 43 35.374132953488335 38.0 35.0 40.0 27.0 41.0 44 35.26533599313272 38.0 34.0 40.0 27.0 41.0 45 35.18092329087714 38.0 34.0 40.0 27.0 41.0 46 35.16851476293681 38.0 34.0 40.0 27.0 41.0 47 35.14331465614686 38.0 34.0 40.0 27.0 41.0 48 35.079826593461384 37.0 34.0 40.0 26.0 41.0 49 35.02339540084647 37.0 34.0 40.0 26.0 41.0 50 34.9389456648089 37.0 34.0 40.0 26.0 41.0 51 34.59238850758833 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 3.0 12 4.0 13 3.0 14 14.0 15 43.0 16 106.0 17 253.0 18 628.0 19 1214.0 20 2071.0 21 3465.0 22 5544.0 23 8311.0 24 12589.0 25 19048.0 26 26325.0 27 30885.0 28 33117.0 29 35820.0 30 41429.0 31 50501.0 32 63379.0 33 82181.0 34 137759.0 35 218648.0 36 121072.0 37 156874.0 38 246682.0 39 510857.0 40 331.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.93672750709031 23.966660752316407 30.45486880920914 15.64174293138414 2 30.528494178786943 24.879184195529525 32.11884638110857 12.473475244574965 3 27.45187128383962 24.279402750117598 35.798511905255424 12.47021406078736 4 25.161746424719993 27.153168958615577 33.924381439110654 13.76070317755377 5 23.70079136217436 31.320906564873514 31.695003037322866 13.283299035629263 6 21.6083274051645 40.48743090021386 27.58602201354331 10.318219681078334 7 88.70397792565497 2.8671885666212864 7.2614955346655545 1.1673379730582 8 90.44572643974355 1.4849993836915385 6.818582556867583 1.250691619697329 9 86.32386650371802 2.8420387594456873 8.464264334975532 2.3698304018607543 10 39.623493568005905 21.236939373487903 21.447479187843633 17.692087870662558 11 34.1917432353928 20.11581071647102 26.554271902027406 19.13817414610877 12 34.04250262138375 21.61739239060801 25.93951112091309 18.400593867095154 13 24.575507183171847 29.8135763633821 27.467237539652402 18.143678913793647 14 17.7826824507962 33.43354564192534 30.827915069930285 17.955856837348183 15 16.69505002047913 27.539812697501986 39.85255027335906 15.912587008659825 16 21.001747220669937 23.66353648297358 38.678689932725646 16.656026363630836 17 21.91946644822263 22.43069846265585 29.858680193393727 25.791154895727793 18 22.363429637748812 25.484493071089936 33.95798821441344 18.194089076747815 19 25.550545861364316 26.848607557434146 28.37506266723931 19.225783913962232 20 27.072413204146233 27.031897141157852 28.854511958318756 17.041177696377158 21 23.801998608193088 26.38767515735212 32.40212717621834 17.408199058236452 22 21.887960096376272 21.50529610719677 32.334858351311304 24.27188544511566 23 19.14408849636765 26.75032984939411 31.566600834973595 22.538980819264644 24 19.101250912716903 25.695253982651607 37.46403715759643 17.73945794703506 25 19.53769679724115 26.924554447674304 33.87900123759161 19.658747517492934 26 18.328350355054475 32.63914338098531 28.550392751549204 20.482113512411015 27 17.40405348562509 32.078496141024644 32.15798058655983 18.359469786790434 28 16.13506607213628 28.593230335199948 36.65885640786686 18.612847184796912 29 17.026087812071797 26.70251757860973 36.235234161287096 20.036160448031378 30 19.78394381035608 28.47488805572092 33.0644791309111 18.676689003011894 31 24.71159251342751 26.79023789506616 29.740780108326575 18.757389483179754 32 25.05556449156763 27.334247570279892 29.796883524333683 17.813304413818795 33 24.379780881614053 27.9118640207964 28.40551880735745 19.302836290232094 34 19.395420745219187 28.21349588399914 29.93739079870813 22.453692572073543 35 19.223628216204325 27.283063567104936 31.6814055591576 21.811902657533143 36 25.72593121997569 26.43758785159292 29.321469257262628 18.515011671168757 37 19.861548929640787 31.02773166979795 30.28501088074625 18.825708519815006 38 20.346359827964264 30.495716518006432 28.13506165019216 21.022862003837144 39 20.27245808687904 29.301183588617697 29.127345910447893 21.299012414055372 40 22.348560850649392 26.916263302451583 29.783175497565445 20.952000349333584 41 19.018063088982228 25.74328735064193 31.232633505402234 24.006016054973607 42 21.072221955063096 25.970354181141627 28.845612795779697 24.11181106801558 43 20.44215019243748 26.406965888570326 29.277139267471792 23.873744651520404 44 19.412997973091365 28.706045184530492 30.613616603073584 21.26734023930456 45 18.95781410036376 32.92021320403569 27.16118373233088 20.960788963269675 46 21.425977484566033 30.28434758912843 28.066742613556904 20.222932312748632 47 19.693293955920957 28.857330947694482 29.501939851610608 21.947435244773953 48 21.003129078207056 27.355251804844126 31.460142530313806 20.181476586635007 49 20.969853948713187 25.650481798448894 32.03007585292393 21.349588399913994 50 19.413771813312152 29.529190082242636 30.034452472115497 21.02258563232972 51 18.14179958754316 31.661396262020087 29.054604929693852 21.142199220742896 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1777.0 1 2465.0 2 3153.0 3 14572.0 4 25991.0 5 17707.0 6 9423.0 7 9466.0 8 9509.0 9 9848.0 10 10187.0 11 10035.0 12 9883.0 13 9534.5 14 9186.0 15 8706.5 16 8227.0 17 8013.0 18 7799.0 19 7607.0 20 7415.0 21 7750.5 22 8086.0 23 8947.5 24 9809.0 25 11111.0 26 14494.5 27 16576.0 28 21003.5 29 25431.0 30 28904.5 31 32378.0 32 36679.0 33 40980.0 34 49587.0 35 58194.0 36 62044.0 37 65894.0 38 76630.0 39 87366.0 40 104283.5 41 121201.0 42 138518.0 43 155835.0 44 164881.5 45 173928.0 46 170040.0 47 166152.0 48 163863.5 49 161575.0 50 148251.0 51 134927.0 52 125599.5 53 116272.0 54 100763.5 55 85255.0 56 79472.0 57 73689.0 58 63199.5 59 52710.0 60 46440.5 61 40171.0 62 33672.5 63 27174.0 64 21574.5 65 15975.0 66 12343.0 67 8711.0 68 7463.0 69 6215.0 70 5438.5 71 4662.0 72 3650.5 73 2639.0 74 1900.5 75 892.0 76 622.0 77 447.5 78 273.0 79 237.5 80 202.0 81 136.5 82 71.0 83 53.0 84 35.0 85 25.5 86 16.0 87 11.0 88 6.0 89 4.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1809159.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.769765772027334 #Duplication Level Percentage of deduplicated Percentage of total 1 79.59186599522114 17.326962800745516 2 7.146138764596956 3.11139534159361 3 2.3902593842606223 1.5610616078923212 4 1.3290616049837194 1.1573343934836116 5 0.8480956754980506 0.9231422103930933 6 0.5939401268606629 0.77579624666189 7 0.4777222500443515 0.7279931041285986 8 0.4045505096651473 0.7045575870691629 9 0.3297076482882925 0.6459892448833887 >10 4.61868371831475 24.310444152370504 >50 1.4887217462464235 22.976364510528754 >100 0.7766554703153864 24.169205546836846 >500 0.003830921420483026 0.5300237545257279 >1k 5.107895227310701E-4 0.1481709121799082 >5k 0.0 0.0 >10k+ 2.5539476136553506E-4 0.9315585867070777 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16755 0.9261209213783863 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03681268478889915 0.0 2 0.0 0.0 0.0 0.12149291466366417 0.0 3 0.0 0.0 0.0 0.18588747589349527 0.0 4 0.0 0.0 0.0 0.29505422132604153 0.0 5 0.0 0.0 0.0 0.5464417444790646 0.0 6 0.0 0.0 0.0 0.8359685356566228 0.0 7 0.0 0.0 0.0 1.025891035558511 0.0 8 0.0 0.0 0.0 1.3723503572654476 0.0 9 0.0 0.0 0.0 1.49450656354693 0.0 10 0.0 0.0 0.0 1.7201915365095053 0.0 11 0.0 0.0 0.0 2.011210733827154 0.0 12 0.0 0.0 0.0 2.2030125599795265 0.0 13 0.0 0.0 0.0 2.2836024915444137 0.0 14 0.0 0.0 0.0 2.320359902031828 0.0 15 0.0 0.0 0.0 2.374528717486965 0.0 16 5.527430148483356E-5 0.0 0.0 2.503373114248112 0.0 17 5.527430148483356E-5 0.0 0.0 2.6617892623036448 0.0 18 5.527430148483356E-5 0.0 0.0 2.8522645052203814 0.0 19 5.527430148483356E-5 0.0 0.0 2.975913117641954 0.0 20 5.527430148483356E-5 0.0 0.0 3.1123300937065235 0.0 21 5.527430148483356E-5 0.0 0.0 3.3104331902281667 0.0 22 5.527430148483356E-5 0.0 0.0 3.5119080191403853 0.0 23 5.527430148483356E-5 0.0 0.0 3.72946766978469 0.0 24 5.527430148483356E-5 0.0 0.0 3.8984412094238263 0.0 25 5.527430148483356E-5 0.0 0.0 4.0526565105665115 0.0 26 5.527430148483356E-5 0.0 0.0 4.1977515519642 0.0 27 5.527430148483356E-5 0.0 0.0 4.346605245862857 0.0 28 5.527430148483356E-5 0.0 0.0 4.511046292780237 0.0 29 5.527430148483356E-5 0.0 0.0 4.710697069743455 0.0 30 5.527430148483356E-5 0.0 0.0 4.921457981305125 0.0 31 5.527430148483356E-5 0.0 0.0 5.118400317495587 0.0 32 5.527430148483356E-5 0.0 0.0 5.292237995665389 0.0 33 5.527430148483356E-5 0.0 0.0 5.472376944204462 0.0 34 5.527430148483356E-5 0.0 0.0 5.665339530688016 0.0 35 5.527430148483356E-5 0.0 0.0 5.89832071144659 0.0 36 5.527430148483356E-5 0.0 0.0 6.105599342014715 0.0 37 5.527430148483356E-5 0.0 0.0 6.320229454680324 0.0 38 5.527430148483356E-5 0.0 0.0 6.57554145323877 0.0 39 5.527430148483356E-5 0.0 0.0 6.949914297195548 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACCTT 20 7.0343603E-4 45.000004 27 ATCGTCT 20 7.0343603E-4 45.000004 12 CCGTACG 20 7.0343603E-4 45.000004 20 ATACGCG 60 0.0 45.000004 1 TAAGCGA 20 7.0343603E-4 45.000004 32 TACGTCG 20 7.0343603E-4 45.000004 31 ACGTTAG 35 1.2124474E-7 45.0 1 CGGTCTA 210 0.0 45.0 31 ATACCCG 25 3.8916965E-5 45.0 16 CGTTTTT 8525 0.0 43.944283 1 ACCGGGT 125 0.0 41.399998 4 ACGGGTA 175 0.0 41.142857 5 GAGTACG 115 0.0 41.086956 1 TCACGAC 225 0.0 41.0 25 TATCGCG 55 6.184564E-11 40.909092 1 CGCGACC 585 0.0 40.769234 10 TCTAGCG 50 1.0822987E-9 40.5 1 GCGACCT 605 0.0 39.79339 11 GCGCGAC 600 0.0 39.750004 9 TCGTACT 40 3.4596815E-7 39.375004 25 >>END_MODULE