SRR1547020_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547020_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1061204
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4146	0.3906883125204956	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1759	0.1657551234258446	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGCATA	25	3.8906022E-5	45.000004	31
ATCGTAA	25	3.8906022E-5	45.000004	28
ACCTACT	25	3.8906022E-5	45.000004	21
GTATACG	25	3.8906022E-5	45.000004	1
CGGTCTA	85	0.0	45.000004	31
CAAACGT	20	7.0330413E-4	45.0	44
CATGCGG	75	0.0	45.0	2
TCCTACG	20	7.0330413E-4	45.0	14
CATTACG	20	7.0330413E-4	45.0	17
CGTTACC	20	7.0330413E-4	45.0	30
ATATACG	35	1.2118107E-7	45.0	1
TCGTAAT	20	7.0330413E-4	45.0	24
CGTAATG	35	1.2118107E-7	45.0	27
CGGTCGA	20	7.0330413E-4	45.0	17
CGCACGA	45	3.8562575E-10	45.0	39
CGCAATA	35	1.2118107E-7	45.0	33
CGTCCCG	35	1.2118107E-7	45.0	37
CCAAACG	20	7.0330413E-4	45.0	35
CCGTTCG	20	7.0330413E-4	45.0	10
TACACGG	40	6.8139343E-9	45.0	2