##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547019_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1268187 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38251772017849 31.0 31.0 33.0 30.0 34.0 2 31.792979268830226 31.0 31.0 34.0 30.0 34.0 3 31.904509350750324 31.0 31.0 34.0 30.0 34.0 4 35.66548702990963 37.0 35.0 37.0 33.0 37.0 5 35.56660255940173 37.0 35.0 37.0 33.0 37.0 6 35.632099209343735 37.0 35.0 37.0 33.0 37.0 7 35.96930894260862 37.0 35.0 37.0 35.0 37.0 8 35.95475272968419 37.0 35.0 37.0 35.0 37.0 9 37.73436015351049 39.0 37.0 39.0 35.0 39.0 10 37.16302643064469 39.0 37.0 39.0 33.0 39.0 11 36.85095415739161 39.0 37.0 39.0 32.0 39.0 12 36.248438124661426 38.0 35.0 39.0 32.0 39.0 13 36.00913666517635 38.0 35.0 39.0 31.0 39.0 14 36.952650516051655 39.0 35.0 41.0 31.0 41.0 15 37.222891419009976 39.0 35.0 41.0 32.0 41.0 16 37.33339247287663 39.0 35.0 41.0 32.0 41.0 17 37.285304927427894 39.0 35.0 41.0 32.0 41.0 18 37.1944113920108 39.0 35.0 41.0 32.0 41.0 19 37.13047444895745 39.0 35.0 41.0 32.0 41.0 20 36.94396094582266 39.0 35.0 41.0 32.0 41.0 21 36.84362873929476 38.0 35.0 41.0 31.0 41.0 22 36.771868028926335 38.0 35.0 41.0 31.0 41.0 23 36.73254969495824 38.0 35.0 41.0 31.0 41.0 24 36.64781455731686 38.0 35.0 41.0 31.0 41.0 25 36.56985917691949 38.0 35.0 41.0 31.0 41.0 26 36.432684611969684 38.0 35.0 40.0 31.0 41.0 27 36.34740933316616 38.0 35.0 40.0 31.0 41.0 28 36.25678705112101 38.0 35.0 40.0 30.0 41.0 29 36.28453532483774 38.0 35.0 40.0 30.0 41.0 30 36.25155990402046 38.0 35.0 40.0 30.0 41.0 31 36.13701607097376 38.0 35.0 40.0 30.0 41.0 32 36.04165868282832 38.0 35.0 40.0 30.0 41.0 33 35.9155708109293 38.0 35.0 41.0 30.0 41.0 34 35.786768039729154 38.0 35.0 41.0 29.0 41.0 35 35.69882753884088 38.0 35.0 41.0 29.0 41.0 36 35.57844308449779 38.0 35.0 40.0 28.0 41.0 37 35.541741083925324 38.0 34.0 40.0 28.0 41.0 38 35.47460666289751 38.0 34.0 40.0 28.0 41.0 39 35.408890013854425 38.0 34.0 40.0 27.0 41.0 40 35.259598939273154 38.0 34.0 40.0 27.0 41.0 41 35.20098061248065 37.0 34.0 40.0 27.0 41.0 42 35.15937476097768 37.0 34.0 40.0 27.0 41.0 43 35.075581913392895 37.0 34.0 40.0 26.0 41.0 44 34.96980019508164 37.0 34.0 40.0 26.0 41.0 45 34.87317958629129 37.0 34.0 40.0 26.0 41.0 46 34.847128223203676 37.0 34.0 40.0 26.0 41.0 47 34.814630649896266 36.0 34.0 40.0 26.0 41.0 48 34.73325779242336 36.0 34.0 40.0 26.0 41.0 49 34.64927096713655 36.0 34.0 40.0 26.0 41.0 50 34.57126354394107 36.0 34.0 40.0 26.0 41.0 51 34.20711220033008 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 3.0 12 3.0 13 7.0 14 20.0 15 44.0 16 109.0 17 260.0 18 607.0 19 1111.0 20 1974.0 21 2923.0 22 4456.0 23 6647.0 24 9588.0 25 13953.0 26 18374.0 27 21599.0 28 24155.0 29 26533.0 30 31029.0 31 36958.0 32 46295.0 33 61099.0 34 103941.0 35 153348.0 36 89972.0 37 116855.0 38 172061.0 39 324022.0 40 238.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.41724288295023 23.111260405602643 27.982781719099787 14.488714992347344 2 32.007188214356404 24.59992098957015 29.792767155001588 13.60012364107186 3 29.562990316096915 24.59779196601132 31.80674458892892 14.032473128962842 4 27.181874597358274 27.004061703833898 31.003866149077385 14.810197549730441 5 23.825035266880988 31.452774709092584 30.05881624713075 14.663373776895677 6 23.44252070081147 39.78813850007924 26.72910225384742 10.040238545261857 7 85.75643812781554 4.391150516445919 7.7196028661388265 2.13280848959972 8 86.8608493857767 3.4373479620907643 7.412629210045521 2.289173442087011 9 82.81152542960936 5.240473210969675 8.648487959583248 3.299513399837721 10 46.66685591320523 28.50888709630362 14.282278559865382 10.541978430625768 11 38.01521384464594 23.110235320185428 23.85365880583857 15.02089202933006 12 35.213970810298484 22.16423918554598 26.29840867316886 16.323381330986674 13 24.95736038928013 29.473492473901718 27.534582833604194 18.03456430321396 14 17.636594603161836 32.043618173029685 31.044238743970727 19.275548479837752 15 17.334352110532596 26.24297520791492 39.60772346664964 16.81494921490285 16 22.12528593969186 23.616075547218195 35.96685662287975 18.2917818902102 17 21.971917390731807 23.98589482465914 28.253325416519804 25.788862368089248 18 24.207628685674905 25.418885385199502 31.1547114108566 19.218774518268994 19 27.41015323449933 26.278222375722194 26.59008490072836 19.721539489050116 20 28.886433940735866 25.987492380855503 27.42608148482834 17.699992193580286 21 25.691952369800354 26.73856458077555 29.45929898350953 18.11018406591457 22 24.42131956880176 21.946211402577063 29.978859584588076 23.653609444033098 23 20.986731452065037 26.43711061539032 30.167869564977405 22.408288367567245 24 20.63552141758274 25.095116098808774 35.13101774422857 19.138344739379917 25 20.904645765963537 26.34169881886504 32.20455658353224 20.54909883163918 26 19.584414601316684 31.72442234465422 27.312927825312826 21.37823522871627 27 19.36512517475735 30.327940595511542 30.669609450341312 19.63732477938979 28 17.525885378102757 27.86899723778906 34.6399229766588 19.965194407449374 29 18.889091277548182 26.12832334663579 33.82844958984755 21.15413578596847 30 21.426177685152112 28.320744495882703 30.826053255553003 19.42702456341218 31 27.554296014704455 26.140072402571548 27.23754462078542 19.06808696193858 32 27.27137243955347 26.094810938765338 27.439171037078918 19.19464558460227 33 26.39681687322138 26.221369561429032 27.070928814125995 20.310884751223597 34 20.798352293470916 26.870564041422913 29.313894559713987 23.017189105392184 35 21.362858947458065 26.61176939993865 30.763049928756566 21.262321723846718 36 27.279730828339982 26.592687040633596 27.306304196463138 18.821277934563277 37 21.400313991548565 29.725978897433897 28.399676073008163 20.47403103800938 38 21.45314531689727 30.209188392563558 26.591819660665184 21.745846629873984 39 21.332342943114856 28.80064217658752 27.50824602365424 22.358768856643383 40 24.654644780304483 25.88458957551213 27.28170214645001 22.179063497733377 41 19.852198453382663 24.809669236476957 29.23866906063538 26.099463249505 42 21.526005234243843 24.906263823868247 27.712080316230963 25.85565062565694 43 21.504163029584753 25.55774503286976 28.294171127759547 24.64392080978594 44 20.531514674097746 27.61808786874491 29.54974305839754 22.300654398759804 45 20.293458299130965 31.333549389798193 26.459268230947014 21.91372408012383 46 22.106913254906413 29.717699361371785 27.193939064191635 20.981448319530163 47 20.872316148959104 27.242670047871485 29.063300601567434 22.821713201601973 48 21.869251143561634 25.76812410157177 31.233091018911246 21.129533735955345 49 21.712807338349943 25.927722015759507 30.722283070241218 21.63718757564933 50 20.418518720031038 29.149171218440184 29.591219591432495 20.841090470096287 51 19.450601528008093 30.078844839128614 27.848101265822784 22.62245236704051 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1158.0 1 1970.5 2 2783.0 3 8698.5 4 14614.0 5 10247.0 6 5880.0 7 5890.0 8 5900.0 9 6043.5 10 6187.0 11 6116.0 12 6045.0 13 5824.5 14 5604.0 15 5303.0 16 5002.0 17 4738.5 18 4475.0 19 4586.5 20 4698.0 21 4975.5 22 5253.0 23 6114.0 24 6975.0 25 7747.0 26 11178.5 27 13838.0 28 16564.0 29 19290.0 30 21755.5 31 24221.0 32 27588.0 33 30955.0 34 35546.0 35 40137.0 36 42854.5 37 45572.0 38 50375.5 39 55179.0 40 66524.5 41 77870.0 42 86847.0 43 95824.0 44 96963.5 45 98103.0 46 98496.5 47 98890.0 48 94375.0 49 89860.0 50 87249.5 51 84639.0 52 78059.0 53 71479.0 54 67365.5 55 63252.0 56 59877.0 57 56502.0 58 55135.5 59 53769.0 60 47598.5 61 41428.0 62 38797.0 63 36166.0 64 31186.5 65 26207.0 66 23644.0 67 21081.0 68 17954.0 69 14827.0 70 12782.5 71 10738.0 72 8685.5 73 6633.0 74 5527.0 75 3318.5 76 2216.0 77 1547.0 78 878.0 79 756.5 80 635.0 81 465.0 82 295.0 83 209.0 84 123.0 85 75.0 86 27.0 87 20.5 88 14.0 89 14.5 90 15.0 91 9.0 92 3.0 93 3.0 94 3.0 95 2.5 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1268187.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.923866725255948 #Duplication Level Percentage of deduplicated Percentage of total 1 79.46377947190811 17.421533106272427 2 5.934001159603277 2.601925011413129 3 2.0896129072909075 1.3743718466046142 4 1.2117794156650072 1.0626756163779258 5 0.8110341718258887 0.8890502546369558 6 0.5953019630886178 0.7830792540022856 7 0.5027564247575748 0.7715655396155867 8 0.4410449250508333 0.7735528125331973 9 0.411329379048085 0.8116137437789251 >10 6.420691680271788 34.94848738415571 >50 1.7366194770803585 26.74953333350803 >100 0.3780617955020621 10.547551234147528 >500 0.0032622781970455673 0.5020827019374017 >1k 3.6247535522728526E-4 0.08375991893669221 >5k 3.6247535522728526E-4 0.6792182420796095 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8547 0.6739542354558121 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.885272440105442E-5 0.0 0.0 0.02554828270594163 0.0 2 7.885272440105442E-5 0.0 0.0 0.08011436799147129 0.0 3 7.885272440105442E-5 0.0 0.0 0.12482386272686914 0.0 4 7.885272440105442E-5 0.0 0.0 0.20517478889154359 0.0 5 7.885272440105442E-5 0.0 0.0 0.38693031863597405 0.0 6 7.885272440105442E-5 0.0 0.0 0.592578223873924 0.0 7 7.885272440105442E-5 0.0 0.0 0.7335668951030092 0.0 8 7.885272440105442E-5 0.0 0.0 1.009945694128705 0.0 9 7.885272440105442E-5 0.0 0.0 1.1250706717542445 0.0 10 7.885272440105442E-5 0.0 0.0 1.3120304813091446 0.0 11 7.885272440105442E-5 0.0 0.0 1.5280080934436324 0.0 12 7.885272440105442E-5 0.0 0.0 1.698408830874311 0.0 13 7.885272440105442E-5 0.0 0.0 1.7672472592764317 0.0 14 7.885272440105442E-5 0.0 0.0 1.8028098379813071 0.0 15 7.885272440105442E-5 0.0 0.0 1.8507522944171482 0.0 16 7.885272440105442E-5 0.0 0.0 1.941511780202762 0.0 17 7.885272440105442E-5 0.0 0.0 2.052851827057051 0.0 18 7.885272440105442E-5 0.0 0.0 2.181933736901577 0.0 19 7.885272440105442E-5 0.0 0.0 2.2684351755695333 0.0 20 7.885272440105442E-5 0.0 0.0 2.3671587865196537 0.0 21 7.885272440105442E-5 0.0 0.0 2.493796261907747 0.0 22 7.885272440105442E-5 0.0 0.0 2.6258745752795134 0.0 23 1.5770544880210885E-4 0.0 0.0 2.757164361407269 0.0 24 1.5770544880210885E-4 0.0 0.0 2.8642463611439006 0.0 25 1.5770544880210885E-4 0.0 0.0 2.962023739401208 0.0 26 1.5770544880210885E-4 0.0 0.0 3.0609050558001303 0.0 27 1.5770544880210885E-4 0.0 0.0 3.163255892072699 0.0 28 1.5770544880210885E-4 0.0 0.0 3.278065458800634 0.0 29 1.5770544880210885E-4 0.0 0.0 3.411247710314015 0.0 30 1.5770544880210885E-4 0.0 0.0 3.576365315209823 0.0 31 1.5770544880210885E-4 0.0 0.0 3.709862977620808 0.0 32 1.5770544880210885E-4 0.0 0.0 3.8275112424271813 0.0 33 1.5770544880210885E-4 0.0 0.0 3.958722175830536 0.0 34 1.5770544880210885E-4 0.0 0.0 4.1065710340825134 0.0 35 1.5770544880210885E-4 0.0 0.0 4.271215522631914 0.0 36 1.5770544880210885E-4 0.0 0.0 4.4048708904917016 0.0 37 1.5770544880210885E-4 0.0 0.0 4.553350570538887 0.0 38 1.5770544880210885E-4 0.0 0.0 4.743701047243033 0.0 39 1.5770544880210885E-4 0.0 0.0 5.104531114102258 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCGCG 35 1.2120654E-7 45.000004 1 GTACGAC 25 3.8910337E-5 45.000004 30 TTAGCCG 20 7.033563E-4 45.0 1 TAACGCG 20 7.033563E-4 45.0 1 TCGATAT 20 7.033563E-4 45.0 16 TATAGCG 75 0.0 45.0 1 CGTTTTT 4675 0.0 42.352943 1 ATACGGA 110 0.0 40.909092 4 TCGTAAG 50 1.0822987E-9 40.500004 1 TATACGG 95 0.0 40.263153 2 ATACCGG 45 1.9284926E-8 40.0 2 ACGGGAT 420 0.0 39.64286 5 GGCGATA 205 0.0 39.512196 8 ATAGCGG 200 0.0 39.375004 2 TACGGGT 75 0.0 39.0 4 ATAGGGC 365 0.0 38.835617 4 TAGGGCA 540 0.0 38.75 5 CGAGATA 180 0.0 38.75 19 TCGTTAG 35 6.2487998E-6 38.57143 1 CGACGGC 35 6.2487998E-6 38.57143 13 >>END_MODULE