##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547018_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1857310 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.43476856313701 31.0 31.0 33.0 30.0 34.0 2 31.851657504670733 31.0 31.0 34.0 30.0 34.0 3 31.96134086393763 33.0 31.0 34.0 30.0 34.0 4 35.71491673441698 37.0 35.0 37.0 33.0 37.0 5 35.62840936623396 37.0 35.0 37.0 33.0 37.0 6 35.69181881322989 37.0 35.0 37.0 33.0 37.0 7 36.03954321034184 37.0 35.0 37.0 35.0 37.0 8 36.03394048381799 37.0 35.0 37.0 35.0 37.0 9 37.82874748964901 39.0 38.0 39.0 35.0 39.0 10 37.149413937361025 39.0 37.0 39.0 33.0 39.0 11 36.91819405484276 39.0 37.0 39.0 33.0 39.0 12 36.41687440438053 39.0 35.0 39.0 32.0 39.0 13 36.256161868508755 39.0 35.0 39.0 32.0 39.0 14 37.284901281961545 39.0 35.0 41.0 32.0 41.0 15 37.47857923556111 39.0 35.0 41.0 32.0 41.0 16 37.55100333277697 39.0 35.0 41.0 33.0 41.0 17 37.48505203762431 39.0 35.0 41.0 32.0 41.0 18 37.36274127636205 39.0 35.0 41.0 32.0 41.0 19 37.32821715276394 39.0 35.0 41.0 32.0 41.0 20 37.18320689599474 39.0 35.0 41.0 32.0 41.0 21 37.086353920454854 39.0 35.0 41.0 32.0 41.0 22 36.99964841625792 39.0 35.0 41.0 32.0 41.0 23 36.96844199406669 39.0 35.0 41.0 32.0 41.0 24 36.88508326558302 38.0 35.0 41.0 32.0 41.0 25 36.804984089893445 38.0 35.0 41.0 31.0 41.0 26 36.680650510684806 38.0 35.0 41.0 31.0 41.0 27 36.59232653676554 38.0 35.0 41.0 31.0 41.0 28 36.52750967797514 38.0 35.0 40.0 31.0 41.0 29 36.55899876703404 38.0 35.0 41.0 31.0 41.0 30 36.50577340347061 38.0 35.0 40.0 31.0 41.0 31 36.436966903747894 38.0 35.0 41.0 31.0 41.0 32 36.35194124836457 38.0 35.0 41.0 30.0 41.0 33 36.2401225428173 38.0 35.0 41.0 30.0 41.0 34 36.12241036768229 38.0 35.0 41.0 30.0 41.0 35 36.029162606134676 38.0 35.0 41.0 30.0 41.0 36 35.942153436959906 38.0 35.0 41.0 29.0 41.0 37 35.91947763162854 38.0 35.0 41.0 29.0 41.0 38 35.870827164016774 38.0 35.0 41.0 29.0 41.0 39 35.80126204026253 38.0 35.0 41.0 29.0 41.0 40 35.67441622561662 38.0 35.0 41.0 28.0 41.0 41 35.63405193532582 38.0 35.0 40.0 28.0 41.0 42 35.58054282806855 38.0 35.0 40.0 28.0 41.0 43 35.50577555712294 38.0 35.0 40.0 28.0 41.0 44 35.38006525566545 38.0 34.0 40.0 27.0 41.0 45 35.290674147019075 38.0 34.0 40.0 27.0 41.0 46 35.2539888333127 38.0 34.0 40.0 27.0 41.0 47 35.22380485756282 38.0 34.0 40.0 27.0 41.0 48 35.13447566642079 37.0 34.0 40.0 27.0 41.0 49 35.05995875755797 37.0 34.0 40.0 27.0 41.0 50 34.99162659975987 37.0 34.0 40.0 27.0 41.0 51 34.630034835326356 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 1.0 11 4.0 12 4.0 13 21.0 14 22.0 15 60.0 16 123.0 17 301.0 18 674.0 19 1251.0 20 2216.0 21 3761.0 22 5469.0 23 8376.0 24 12645.0 25 18605.0 26 24712.0 27 29064.0 28 31979.0 29 34993.0 30 41619.0 31 50995.0 32 63626.0 33 83766.0 34 143110.0 35 212442.0 36 128059.0 37 169111.0 38 263866.0 39 526104.0 40 327.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.52709563831563 23.432598758419434 29.328221998481673 14.712083604783263 2 31.90840516661193 25.13355336481255 30.207450560218813 12.75059090835671 3 29.231523009083027 25.053329815701204 32.23500654171894 13.480140633496832 4 26.08735213830755 27.50057879406238 31.87496971426418 14.537099353365889 5 23.843838669904326 31.289337805751327 30.54132051192316 14.325503012421189 6 22.223430660471326 40.58412435188525 26.971534100392503 10.220910887250916 7 87.71405958079157 3.6486100866306646 7.014553305587112 1.6227770269906479 8 88.80628435748476 2.802655453316894 6.749331021746505 1.6417291674518526 9 84.88717553881689 4.513947590870668 8.146836015527834 2.4520408547846078 10 42.681081779562916 25.709870727019187 19.296994039767192 12.312053453650709 11 35.8029085074651 25.36060216119011 23.000306895456333 15.836182435888462 12 32.84971275662114 22.433573286096557 27.474196553079455 17.242517404202854 13 24.665187825403407 28.855656837038513 27.745772111279216 18.733383226278868 14 18.64718329196526 31.74515832036655 30.267375936165745 19.340282451502443 15 18.401882292132168 27.145064636490407 37.322902477238586 17.130150594138836 16 21.645390376404585 24.326202949426857 36.664046389671086 17.364360284497472 17 22.18100370966613 24.501779455233645 29.134716337068124 24.1825004980321 18 23.094098454216045 26.221147789006682 31.792861719368332 18.89189203740894 19 26.51108323327824 27.668832881963702 27.25355487236918 18.566529012388884 20 28.547684554543938 26.553133294926536 27.000339200241207 17.898842950288323 21 25.518680241855158 26.50413770452967 30.128680726426932 17.848501327188245 22 23.20167338785663 22.82403045264388 30.834971006455575 23.13932515304392 23 21.95023986302771 26.165475876401896 30.508208107424178 21.37607615314622 24 21.48833528059398 25.144483150362625 33.88292745960556 19.484254109437842 25 21.1913466249576 26.4219758683257 32.07052134538661 20.316156161330095 26 20.19517474196553 31.317119920745597 28.12201517248063 20.365690164808246 27 19.19431866516629 30.624020761208413 30.672962510297154 19.508698063328147 28 18.059182365894763 28.722076551571895 34.05909621980175 19.159644862731582 29 20.081515740506433 26.087567503540065 33.2385546839246 20.5923620720289 30 20.713074284852826 27.251239696119654 32.38883115904184 19.64685485998568 31 25.715039492599512 25.843181805945157 28.89129978301953 19.5504789184358 32 26.252537271645554 26.502414782669558 28.315036262121023 18.930011683563862 33 25.76398124168825 26.26518997905573 28.25624155364479 19.714587225611233 34 21.47665171673011 27.438661289714695 29.304477981597042 21.780209011958153 35 21.148758150228016 27.142749460240882 30.740533351998323 20.967959037532776 36 25.806462033801576 27.16197080724273 28.00501800991757 19.026549149038125 37 21.362131254340955 30.229687020475847 28.769833791881805 19.638347933301386 38 21.57028175156544 30.650241478266953 26.625819060899904 21.153657709267705 39 22.181972853212443 28.52787095315268 27.89981209383463 21.39034409980025 40 24.140288912459418 25.703248246119387 28.77559481185155 21.380868029569648 41 19.956657746956623 26.205372285725055 29.613311725021674 24.224658242296655 42 21.996597229326284 26.394032229407046 28.005717946923237 23.603652594343433 43 21.863770722173467 25.969008943041278 28.50175791871039 23.665462416074863 44 20.937915587597118 27.21877338731822 29.75033785420851 22.09297317087616 45 20.859738008194647 30.784683224663627 26.92221546214687 21.433363304994856 46 21.98647506339814 29.64200914225412 27.87902934889706 20.492486445450677 47 21.70230063909633 28.042599242991205 28.054336648163204 22.20076346974926 48 21.609639747807314 26.40754639774728 31.202330251815795 20.78048360262961 49 21.339894794083918 26.286834184923357 31.14364322595582 21.229627795036908 50 20.78699840091315 28.87277837302335 29.1035960609699 21.2366271650936 51 19.83729156683591 30.31997889420721 28.25726453849923 21.585465000457653 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1357.0 1 2464.5 2 3572.0 3 10721.0 4 17870.0 5 12834.0 6 7798.0 7 7794.5 8 7791.0 9 8030.0 10 8269.0 11 8137.0 12 8005.0 13 7713.5 14 7422.0 15 7450.5 16 7479.0 17 7185.0 18 6891.0 19 7234.5 20 7578.0 21 7792.0 22 8006.0 23 9240.0 24 10474.0 25 11790.5 26 16256.5 27 19406.0 28 23676.0 29 27946.0 30 33060.5 31 38175.0 32 41229.5 33 44284.0 34 51515.0 35 58746.0 36 64296.5 37 69847.0 38 77991.0 39 86135.0 40 99244.5 41 112354.0 42 126763.5 43 141173.0 44 148032.0 45 154891.0 46 156968.5 47 159046.0 48 156839.5 49 154633.0 50 145736.5 51 136840.0 52 125505.5 53 114171.0 54 103111.0 55 92051.0 56 86469.0 57 80887.0 58 74929.5 59 68972.0 60 61830.5 61 54689.0 62 48319.5 63 41950.0 64 36159.5 65 30369.0 66 24433.0 67 18497.0 68 15383.0 69 12269.0 70 10972.5 71 9676.0 72 7873.5 73 6071.0 74 5036.5 75 3253.0 76 2504.0 77 1707.0 78 910.0 79 814.0 80 718.0 81 529.0 82 340.0 83 216.5 84 93.0 85 61.0 86 29.0 87 19.0 88 9.0 89 7.5 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1857310.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.771143017210054 #Duplication Level Percentage of deduplicated Percentage of total 1 79.8275110704976 16.581086491532247 2 6.5978203025284285 2.7408853821134027 3 2.2025918661898642 1.3725105198351981 4 1.1478747350506058 0.9537068115031293 5 0.7711891451159587 0.8009240013261771 6 0.5688020921495235 0.7088801762715629 7 0.4444367956085957 0.6462022170587688 8 0.4025204867278526 0.6688648477744983 9 0.32494114967380955 0.607445918284622 >10 5.142925149926845 26.708527674629128 >50 1.8266889270639612 26.86423331547097 >100 0.7387907122362443 20.296462231093173 >500 0.0031260537845538977 0.4120999209800912 >1k 5.210089640923162E-4 0.13392165236682324 >5k 2.605044820461581E-4 0.504248839760172 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9319 0.5017471504487673 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.384130812842229E-5 0.0 0.0 0.015883185897884573 0.0 2 5.384130812842229E-5 0.0 0.0 0.07203967027582903 0.0 3 5.384130812842229E-5 0.0 0.0 0.12195056291087648 0.0 4 5.384130812842229E-5 0.0 0.0 0.20788129068383845 0.0 5 5.384130812842229E-5 0.0 0.0 0.41371661165879686 0.0 6 5.384130812842229E-5 0.0 0.0 0.6450727126866275 0.0 7 5.384130812842229E-5 0.0 0.0 0.7800528721645821 0.0 8 5.384130812842229E-5 0.0 0.0 1.0300380658048467 0.0 9 5.384130812842229E-5 0.0 0.0 1.1284061357554742 0.0 10 5.384130812842229E-5 0.0 0.0 1.3041980067947732 0.0 11 5.384130812842229E-5 0.0 0.0 1.5722738799661877 0.0 12 5.384130812842229E-5 0.0 0.0 1.7721328157388911 0.0 13 5.384130812842229E-5 0.0 0.0 1.8530024605477815 0.0 14 5.384130812842229E-5 0.0 0.0 1.8874608977499718 0.0 15 5.384130812842229E-5 0.0 0.0 1.935056614135497 0.0 16 5.384130812842229E-5 0.0 0.0 2.0487156155945967 0.0 17 5.384130812842229E-5 0.0 0.0 2.17998072481169 0.0 18 5.384130812842229E-5 0.0 0.0 2.3378972815523524 0.0 19 5.384130812842229E-5 0.0 0.0 2.445526056501069 0.0 20 5.384130812842229E-5 0.0 0.0 2.561446392901562 0.0 21 5.384130812842229E-5 0.0 0.0 2.7123097382774013 0.0 22 5.384130812842229E-5 0.0 0.0 2.873187566965127 0.0 23 5.384130812842229E-5 0.0 0.0 3.043487624575327 0.0 24 5.384130812842229E-5 0.0 0.0 3.1802983885296476 0.0 25 5.384130812842229E-5 0.0 0.0 3.3011182839698274 0.0 26 5.384130812842229E-5 0.0 0.0 3.419623003160485 0.0 27 5.384130812842229E-5 0.0 0.0 3.5327435915383 0.0 28 5.384130812842229E-5 0.0 0.0 3.657816950320625 0.0 29 5.384130812842229E-5 0.0 0.0 3.8037268953486496 0.0 30 5.384130812842229E-5 0.0 0.0 3.9612127216242845 0.0 31 5.384130812842229E-5 0.0 0.0 4.110191621215629 0.0 32 5.384130812842229E-5 0.0 0.0 4.255347787929855 0.0 33 5.384130812842229E-5 0.0 0.0 4.405834244148796 0.0 34 5.384130812842229E-5 0.0 0.0 4.5595511788554415 0.0 35 5.384130812842229E-5 0.0 0.0 4.739811878469399 0.0 36 5.384130812842229E-5 0.0 0.0 4.904512440034243 0.0 37 5.384130812842229E-5 0.0 0.0 5.078473706597175 0.0 38 5.384130812842229E-5 0.0 0.0 5.285547377659087 0.0 39 5.384130812842229E-5 0.0 0.0 5.551954170278521 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 365 0.0 42.534245 31 CGGGTAT 170 0.0 42.35294 6 CACGACG 375 0.0 41.4 26 TACGCGG 125 0.0 41.4 2 CGTTTTT 6545 0.0 41.356 1 CTATGCG 55 6.184564E-11 40.909092 1 CACGATA 50 1.0822987E-9 40.5 13 CTCACGA 390 0.0 40.384617 24 GTTAACG 135 0.0 40.000004 1 CTAACGG 45 1.929402E-8 40.0 2 CTACGCG 45 1.929402E-8 40.0 1 TACGGGA 390 0.0 39.807693 4 TCGTCTA 40 3.4597542E-7 39.375 32 AGGGTAC 935 0.0 38.983955 6 CGCTTAA 35 6.250366E-6 38.57143 42 CGACGGT 405 0.0 38.333336 28 CGTTAGG 350 0.0 37.92857 2 ACGGTCT 410 0.0 37.865852 30 TACGGGT 275 0.0 37.636364 4 CGCGACG 30 1.1401925E-4 37.500004 23 >>END_MODULE