##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547016_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 554709 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.704989462943633 31.0 31.0 33.0 30.0 34.0 2 32.07770200231112 33.0 31.0 34.0 30.0 34.0 3 32.14471191201152 33.0 31.0 34.0 30.0 34.0 4 35.79854301985365 37.0 35.0 37.0 35.0 37.0 5 35.754049420506966 37.0 35.0 37.0 33.0 37.0 6 35.81397994263659 37.0 35.0 37.0 35.0 37.0 7 36.143687951700805 37.0 35.0 37.0 35.0 37.0 8 36.07941641473277 37.0 35.0 37.0 35.0 37.0 9 37.89637449545618 39.0 38.0 39.0 35.0 39.0 10 37.41290658705736 39.0 37.0 39.0 35.0 39.0 11 37.1490367021267 39.0 37.0 39.0 34.0 39.0 12 36.184285814724475 37.0 35.0 39.0 33.0 39.0 13 35.768487621437544 37.0 35.0 39.0 31.0 39.0 14 36.734410294406615 38.0 35.0 41.0 32.0 41.0 15 37.013891968581724 38.0 35.0 41.0 32.0 41.0 16 37.20040057038916 38.0 35.0 41.0 33.0 41.0 17 37.16934284462664 38.0 35.0 41.0 33.0 41.0 18 37.11971321900312 38.0 35.0 41.0 33.0 41.0 19 37.036864373933 38.0 35.0 41.0 33.0 41.0 20 36.86810922483681 38.0 35.0 41.0 33.0 41.0 21 36.77474675911154 38.0 35.0 41.0 32.0 41.0 22 36.67583363529346 38.0 35.0 41.0 32.0 41.0 23 36.641729267057144 37.0 35.0 41.0 32.0 41.0 24 36.51811310074291 37.0 35.0 40.0 32.0 41.0 25 36.43053925571786 37.0 35.0 40.0 32.0 41.0 26 36.28516753829486 36.0 35.0 40.0 32.0 41.0 27 36.20224478059667 36.0 35.0 40.0 31.0 41.0 28 36.25856440043338 36.0 35.0 40.0 32.0 41.0 29 36.27657564596933 36.0 35.0 40.0 32.0 41.0 30 36.234263370524005 36.0 35.0 40.0 31.0 41.0 31 36.069265146229824 36.0 35.0 40.0 31.0 41.0 32 35.86457403791898 36.0 35.0 40.0 31.0 41.0 33 35.70641002760006 36.0 35.0 40.0 30.0 41.0 34 35.57753705095825 36.0 35.0 40.0 30.0 41.0 35 35.45636360686414 36.0 35.0 40.0 30.0 41.0 36 35.28457443452333 36.0 35.0 40.0 29.0 41.0 37 35.154673892076744 36.0 35.0 40.0 28.0 41.0 38 35.067453385468774 36.0 34.0 40.0 28.0 41.0 39 34.98894014699599 36.0 34.0 40.0 27.0 41.0 40 34.791059816949065 36.0 34.0 40.0 26.0 41.0 41 34.76667946617055 36.0 34.0 40.0 26.0 41.0 42 34.67698919613707 36.0 34.0 40.0 26.0 41.0 43 34.54362016841263 35.0 34.0 40.0 25.0 41.0 44 34.411093023549284 35.0 34.0 40.0 24.0 41.0 45 34.307761366770684 35.0 34.0 40.0 24.0 41.0 46 34.279589838996664 35.0 34.0 40.0 24.0 41.0 47 34.23730099926268 35.0 34.0 40.0 23.0 41.0 48 34.181080530512396 35.0 34.0 40.0 23.0 41.0 49 34.1675527168299 35.0 34.0 40.0 24.0 41.0 50 34.022361274109485 35.0 34.0 40.0 24.0 41.0 51 33.64357888550573 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 0.0 14 5.0 15 16.0 16 32.0 17 107.0 18 280.0 19 485.0 20 810.0 21 1355.0 22 1966.0 23 3109.0 24 4812.0 25 6662.0 26 8350.0 27 9095.0 28 9736.0 29 10826.0 30 12969.0 31 15080.0 32 18393.0 33 24910.0 34 49494.0 35 106614.0 36 33391.0 37 39626.0 38 60620.0 39 135831.0 40 132.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.26989286274425 25.95757415149204 28.96275344369751 12.809779542066199 2 30.62146098224475 27.45782022646108 28.11798618735229 13.802732603941886 3 28.651419032321453 26.05474221618903 31.22069409365992 14.0731446578296 4 23.746685198906093 31.299654413395135 30.066214898261972 14.887445489436804 5 22.964473264360233 33.00974024218103 29.73342779727749 14.292358696181239 6 21.031027079063076 41.487518680966055 26.468833208042415 11.012621031928454 7 86.32634408311385 4.831902853568267 7.118687455945369 1.7230656073725141 8 86.14624965522462 3.748992715099268 6.0992340127886875 4.005523616887413 9 82.21229509526616 5.5969886913679066 9.327953936207994 2.8627622771579335 10 49.72859643524803 20.941070002469765 15.802700154495419 13.527633407786785 11 45.94336850492781 22.398230423519358 19.219446592717983 12.438954478834848 12 40.81220964505714 21.682539854229876 21.952591358712407 15.55265914200058 13 20.031223578488902 43.29873861790596 23.59489389932379 13.075143904281344 14 14.954868228206141 45.2502122734623 25.778921921223564 14.015997577107997 15 13.228557676186975 25.53464969921166 47.21033911474304 14.026453509858323 16 13.966422033895249 19.875285960746986 48.156781303350044 18.00151070200772 17 14.336886547721416 21.918519439922555 26.927632326138568 36.81696168621746 18 18.983647281727897 25.040156190002328 34.18531157778222 21.790884950487552 19 25.228543254210766 27.640618774889177 25.3466231844084 21.784214786491656 20 27.817828807536927 26.21428532798278 24.63634085619667 21.331545008283623 21 20.45342693195892 31.174363495093825 27.874074514745566 20.49813505820169 22 21.52173481951798 26.5968282468826 25.07657167992587 26.804865253673547 23 19.296243616022092 32.59871392027171 22.997283260231942 25.107759203474256 24 18.988514698697877 26.700125651467705 37.229790755152706 17.081568894681716 25 16.600055164058993 26.398526074031608 35.26028962933718 21.741129132572212 26 16.25014196632829 35.094076353547536 27.659367343958724 20.996414336165447 27 18.15312172688743 34.67205327478011 27.131523014769904 20.043301983562554 28 14.521668117878022 31.486419005280247 37.412228754175615 16.57968412266612 29 14.25468128333955 26.3128955903005 36.42955135034766 23.002871776012288 30 17.28618068212342 30.64381504536613 32.88462959858232 19.18537467392813 31 26.336151026934846 28.96311399310269 24.854112696927576 19.84662228303489 32 27.109709775756297 27.228330530061704 27.22274201428136 18.439217679900633 33 25.122541729086784 29.32780971644592 24.888905714527798 20.6607428399395 34 17.55605191190336 27.788444031014457 29.664923410292605 24.990580646789578 35 18.184669799840997 26.762680973267067 31.25981370412234 23.792835522769597 36 28.88613669509599 24.250552992650203 26.116215889772835 20.747094422480977 37 20.312632389234718 30.0391736928732 30.237295591021603 19.410898326870484 38 20.519587747810114 30.747472999356418 24.96480136431895 23.768137888514516 39 20.691389539380108 30.136702306975373 27.202370972888488 21.969537180756035 40 23.27580767573629 25.454066907153123 25.955050305655757 25.31507511145483 41 15.948722663594786 23.98753220156875 28.532798278016042 31.530946856820425 42 22.192717262564695 26.4295333228774 25.52888090872872 25.84886850582918 43 21.802422531453427 26.439808980925132 27.61916608528075 24.138602402340688 44 20.353915296128243 29.68817884692695 27.550661698295865 22.407244158648947 45 17.775085675552408 33.527308913322116 24.04540038110072 24.652205030024753 46 23.121672805020292 29.192062865394284 27.39201996001507 20.294244369570354 47 21.41897823904065 26.005707497084057 28.904164165355166 23.671150098520126 48 22.77698757366475 22.98844979980494 30.42568265523004 23.808879971300268 49 21.730492925119297 21.33316748060695 32.21256550732006 24.7237740869537 50 19.85888096281113 29.269400712806178 27.725888709215102 23.145829615167592 51 17.661692887622156 31.011395163950827 24.591813004656498 26.73509894377052 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 625.0 1 702.5 2 780.0 3 2150.5 4 3521.0 5 2726.0 6 1931.0 7 2240.5 8 2550.0 9 2938.0 10 3326.0 11 3588.0 12 3850.0 13 3936.0 14 4022.0 15 3880.5 16 3739.0 17 3625.0 18 3511.0 19 3467.0 20 3423.0 21 3342.5 22 3262.0 23 3160.5 24 3059.0 25 3268.0 26 3787.5 27 4098.0 28 4179.0 29 4260.0 30 5289.5 31 6319.0 32 7080.0 33 7841.0 34 9112.0 35 10383.0 36 11052.5 37 11722.0 38 14620.5 39 17519.0 40 26051.5 41 34584.0 42 44074.0 43 53564.0 44 60364.0 45 67164.0 46 65767.5 47 64371.0 48 59359.5 49 54348.0 50 47785.5 51 41223.0 52 37653.5 53 34084.0 54 29661.5 55 25239.0 56 22548.5 57 19858.0 58 18222.5 59 16587.0 60 14673.5 61 12760.0 62 11238.0 63 9716.0 64 8144.0 65 6572.0 66 5275.5 67 3979.0 68 3174.0 69 2369.0 70 1981.0 71 1593.0 72 1412.5 73 1232.0 74 1100.0 75 778.0 76 588.0 77 436.0 78 284.0 79 213.5 80 143.0 81 167.5 82 192.0 83 120.0 84 48.0 85 29.5 86 11.0 87 9.5 88 8.0 89 5.0 90 2.0 91 2.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 554709.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.006121540282763 #Duplication Level Percentage of deduplicated Percentage of total 1 79.70284231910051 20.727618044565205 2 6.689360996690295 3.479286702135097 3 2.1912773064756053 1.7095987188200406 4 1.161254680234922 1.207989214136463 5 0.7656164570684819 0.9955357317881811 6 0.5710635826285514 0.8910689362240449 7 0.44261246041162655 0.8057443408495848 8 0.36363869690937073 0.7565465718860114 9 0.30714690150547574 0.7188929686145394 >10 6.564215399257521 45.76864214862374 >50 1.171331962920909 18.562863965817353 >100 0.06197892074908496 2.4242667861463745 >500 0.005571138943737974 1.1478412438813477 >1k 0.0020891771039017403 0.8041046265120202 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2087 0.37623330430910623 No Hit GAGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT 1272 0.22930942169678156 No Hit AAGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT 1081 0.19487695350174594 No Hit AAGAGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT 985 0.17757058205293225 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 938 0.16909767103111722 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 889 0.16026421060411855 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 786 0.1416959162371622 No Hit GAGAGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT 734 0.1323216317023881 No Hit TAGAGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT 725 0.13069915937906182 No Hit GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 709 0.12781476413759285 No Hit GCTATGGGGATTCGGATTTTTTTTAAAGGTGCTTGCTTGTCAATGTAAATA 572 0.10311712988251498 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.802747025918094E-4 0.0 0.0 0.1725228903803616 0.0 2 1.802747025918094E-4 0.0 0.0 0.6078862971395813 0.0 3 1.802747025918094E-4 0.0 0.0 0.8858698885361513 0.0 4 1.802747025918094E-4 0.0 0.0 1.6606905602757482 0.0 5 1.802747025918094E-4 0.0 0.0 2.391343929880352 0.0 6 1.802747025918094E-4 0.0 0.0 3.6294705872808986 0.0 7 1.802747025918094E-4 0.0 0.0 4.0534766877768345 0.0 8 1.802747025918094E-4 0.0 0.0 5.3103519142469295 0.0 9 1.802747025918094E-4 0.0 0.0 5.7419295522517215 0.0 10 1.802747025918094E-4 0.0 0.0 6.444460068252003 0.0 11 1.802747025918094E-4 0.0 0.0 7.344391383590315 0.0 12 1.802747025918094E-4 0.0 0.0 7.999329378106358 0.0 13 1.802747025918094E-4 0.0 0.0 8.29443906624915 0.0 14 1.802747025918094E-4 0.0 0.0 8.407831854179399 0.0 15 1.802747025918094E-4 0.0 0.0 8.57638870110274 0.0 16 1.802747025918094E-4 0.0 0.0 8.947033489631501 0.0 17 1.802747025918094E-4 0.0 0.0 9.334263550798708 0.0 18 1.802747025918094E-4 0.0 0.0 9.87959452613893 0.0 19 1.802747025918094E-4 0.0 0.0 10.110346145456447 0.0 20 1.802747025918094E-4 0.0 0.0 10.351012873416511 0.0 21 1.802747025918094E-4 0.0 0.0 10.65874179074073 0.0 22 1.802747025918094E-4 0.0 0.0 10.976205542004907 0.0 23 1.802747025918094E-4 0.0 0.0 11.332248079623731 0.0 24 1.802747025918094E-4 0.0 0.0 11.577782224553776 0.0 25 1.802747025918094E-4 0.0 0.0 11.769053684003685 0.0 26 1.802747025918094E-4 0.0 0.0 11.968978329178002 0.0 27 1.802747025918094E-4 0.0 0.0 12.160249788627912 0.0 28 1.802747025918094E-4 0.0 0.0 12.338721744193803 0.0 29 1.802747025918094E-4 0.0 0.0 12.53287759888518 0.0 30 1.802747025918094E-4 0.0 0.0 12.778051194410041 0.0 31 1.802747025918094E-4 0.0 0.0 13.030255503335983 0.0 32 1.802747025918094E-4 0.0 0.0 13.229639324402525 0.0 33 1.802747025918094E-4 0.0 0.0 13.427941497253515 0.0 34 1.802747025918094E-4 0.0 0.0 13.637240426962606 0.0 35 1.802747025918094E-4 0.0 0.0 13.902965338582932 0.0 36 1.802747025918094E-4 0.0 0.0 14.124162398663083 0.0 37 1.802747025918094E-4 0.0 0.0 14.337607646531785 0.0 38 1.802747025918094E-4 0.0 0.0 14.546005202727917 0.0 39 1.802747025918094E-4 0.0 0.0 14.754222484221456 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGAG 110 0.0 45.000004 1 AGCATAG 55 1.8189894E-12 45.000004 1 AGTTAAG 45 3.8380676E-10 45.000004 1 CGTCAGG 55 1.8189894E-12 45.000004 2 AACCGAA 25 3.8881873E-5 45.0 37 AATCCGC 20 7.0301275E-4 45.0 19 TCGTTAG 35 1.2104101E-7 45.0 1 AGTCCAA 35 1.2104101E-7 45.0 43 CGAACAT 20 7.0301275E-4 45.0 40 GTCGATG 40 6.8048394E-9 45.0 1 CGAGTAT 25 3.8881873E-5 45.0 33 TTAGACA 20 7.0301275E-4 45.0 11 ATTACGA 20 7.0301275E-4 45.0 31 CCAATCT 20 7.0301275E-4 45.0 31 TAAACGG 50 2.1827873E-11 45.0 2 CACGATC 20 7.0301275E-4 45.0 17 CCGCTAT 20 7.0301275E-4 45.0 22 TCGATAG 20 7.0301275E-4 45.0 1 CCCGTAT 20 7.0301275E-4 45.0 34 CGCTAAG 20 7.0301275E-4 45.0 29 >>END_MODULE