##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547015_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4021400 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.63055353856866 31.0 31.0 33.0 30.0 34.0 2 32.007157954941064 33.0 31.0 34.0 30.0 34.0 3 32.069099567314865 33.0 31.0 34.0 30.0 34.0 4 35.772068682548365 37.0 35.0 37.0 35.0 37.0 5 35.73943651464664 37.0 35.0 37.0 33.0 37.0 6 35.79182150494852 37.0 35.0 37.0 35.0 37.0 7 36.11614636693689 37.0 35.0 37.0 35.0 37.0 8 36.04087357636644 37.0 35.0 37.0 35.0 37.0 9 37.80614462624956 39.0 38.0 39.0 35.0 39.0 10 37.34992241507933 39.0 37.0 39.0 34.0 39.0 11 37.119554881384595 39.0 37.0 39.0 33.0 39.0 12 36.770314567066194 39.0 35.0 39.0 33.0 39.0 13 36.694502909434526 39.0 35.0 39.0 33.0 39.0 14 37.78485079822947 40.0 36.0 41.0 33.0 41.0 15 37.85796712587656 40.0 36.0 41.0 33.0 41.0 16 37.91577709255483 40.0 36.0 41.0 33.0 41.0 17 37.83139478788482 40.0 36.0 41.0 33.0 41.0 18 37.73055154921172 39.0 36.0 41.0 33.0 41.0 19 37.63760730093997 39.0 36.0 41.0 33.0 41.0 20 37.48541552693092 39.0 35.0 41.0 33.0 41.0 21 37.41827647088079 39.0 35.0 41.0 33.0 41.0 22 37.32267941512906 39.0 35.0 41.0 32.0 41.0 23 37.20174590938479 39.0 35.0 41.0 32.0 41.0 24 37.10314069726961 39.0 35.0 41.0 32.0 41.0 25 36.973113592281294 39.0 35.0 41.0 32.0 41.0 26 36.82289550902671 39.0 35.0 41.0 31.0 41.0 27 36.73489531009101 38.0 35.0 41.0 31.0 41.0 28 36.75324364649127 39.0 35.0 41.0 31.0 41.0 29 36.73117098522903 39.0 35.0 41.0 31.0 41.0 30 36.62503332172875 38.0 35.0 41.0 31.0 41.0 31 36.4855639826926 38.0 35.0 41.0 31.0 41.0 32 36.348005420997666 39.0 35.0 41.0 30.0 41.0 33 36.146740687322826 38.0 35.0 41.0 30.0 41.0 34 35.906753369473314 38.0 35.0 41.0 29.0 41.0 35 35.74795742776148 38.0 35.0 41.0 28.0 41.0 36 35.60064753568409 38.0 35.0 41.0 27.0 41.0 37 35.51089968667628 38.0 35.0 41.0 27.0 41.0 38 35.3594501914756 38.0 35.0 41.0 27.0 41.0 39 35.24162629929875 38.0 35.0 40.0 26.0 41.0 40 35.07657283533098 38.0 34.0 40.0 25.0 41.0 41 34.9844628736261 38.0 34.0 40.0 25.0 41.0 42 34.87688939175411 37.0 34.0 40.0 24.0 41.0 43 34.739384294026955 37.0 34.0 40.0 24.0 41.0 44 34.5139399214204 37.0 34.0 40.0 23.0 41.0 45 34.41277714228875 36.0 34.0 40.0 23.0 41.0 46 34.367868155368775 36.0 34.0 40.0 23.0 41.0 47 34.309285820858406 36.0 34.0 40.0 23.0 41.0 48 34.20732804495947 36.0 34.0 40.0 23.0 41.0 49 34.108595016660864 36.0 33.0 40.0 23.0 41.0 50 33.99089545929279 35.0 33.0 40.0 23.0 41.0 51 33.63270627144775 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 1.0 11 7.0 12 4.0 13 20.0 14 46.0 15 108.0 16 325.0 17 866.0 18 1776.0 19 3372.0 20 5831.0 21 9384.0 22 14006.0 23 20913.0 24 31193.0 25 46999.0 26 64040.0 27 74577.0 28 78057.0 29 82219.0 30 91330.0 31 106382.0 32 129535.0 33 166899.0 34 279320.0 35 396851.0 36 327400.0 37 427261.0 38 606901.0 39 1055008.0 40 765.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.09382304670015 23.46889143084498 25.577957925100712 14.859327597354156 2 35.23509225642811 24.35519968170289 26.406276421146863 14.003431640722136 3 30.725319540458546 25.275700004973395 30.529517083602727 13.469463370965334 4 26.021112050529666 28.167951459690656 30.3830258119063 15.427910677873378 5 23.796463918038494 31.606181926692194 29.138036504699855 15.459317650569455 6 22.547296961257274 40.12416074004078 26.83816581290098 10.490376485800965 7 86.0224051325409 3.4498433381409463 8.763564927637141 1.7641866016810066 8 85.39429054558114 3.160242701546725 8.660441637240762 2.785025115631372 9 80.12366340080568 4.817476500721142 11.302034117471527 3.7568259810016413 10 42.3744218431392 26.12841299050082 17.18560700253643 14.311558163823543 11 33.351370169592684 26.745088775053468 23.48953100910131 16.41401004625255 12 27.487168647734624 23.32118167802258 29.011612871139402 20.180036803103395 13 24.16357487442184 25.67628189187845 31.572437459591185 18.58770577410852 14 22.51046899089869 26.321057343213806 32.050380464514845 19.11809320137266 15 21.87536678768588 22.768712388720346 35.891555179788135 19.46436564380564 16 25.290968319490727 21.556149599641916 33.18351817774904 19.969363903118317 17 24.290744516834934 22.440319291788928 29.752698065350376 23.516238126025762 18 26.035286218729798 21.866663351071765 30.28641766548963 21.811632764708808 19 27.90125329487243 24.788307554582982 26.626324165713434 20.684114984831155 20 29.993758392599588 23.772218630327746 25.779280847466058 20.454742129606604 21 27.939871686477346 24.907470035311086 27.4862485701497 19.66640970806187 22 26.87243248619884 21.99955239468842 26.824712786591736 24.303302332521014 23 24.887079126672305 26.329561844133885 26.513179489729943 22.270179539463868 24 24.311607897747052 24.32038593524643 30.577385984980353 20.79062018202616 25 25.286442532451385 23.94253245138509 28.660889242552344 22.11013577361118 26 23.214626746904063 26.138732779628988 27.680534142338487 22.966106331128465 27 23.734371114537225 24.318844183617646 28.075918834236834 23.870865867608295 28 22.4808773064107 26.582483712140046 29.129357935047494 21.807281046401748 29 23.84938081265231 24.660242701546725 28.348634803799673 23.141741682001292 30 24.851991843636544 24.964291042920376 28.968966031730243 21.214751081712837 31 26.347167653056147 25.81411946088427 26.15661212513055 21.68210076092903 32 27.112274332322077 24.871910280001988 26.29452429502163 21.721291092654297 33 25.798726811558165 25.61304520813647 25.61816780225792 22.970060178047447 34 23.08720843487343 27.733127766449496 27.915377729149053 21.264286069528023 35 23.741209529019745 27.359750335703986 27.11073258069329 21.788307554582982 36 26.150867856965238 28.91353757397921 24.495747749539962 20.43984681951559 37 25.29370368528373 27.34328840702243 25.074004078181726 22.28900382951211 38 25.266175958621375 28.15492117173124 25.098796439051075 21.48010643059631 39 25.449843338140948 26.269259461878946 24.302929328094695 23.977967871885415 40 26.933058138956582 25.241806336101856 25.91863530113891 21.906500223802656 41 22.970756452976577 25.445491619833888 26.40953399313672 25.174217934052816 42 24.889391754115483 25.66501715820361 25.69498184711792 23.75060924056299 43 24.329561844133885 24.17255184761526 27.707191525339436 23.790694782911423 44 24.482717461580545 25.5237230815139 26.91706868254837 23.07649077435719 45 23.204356691699406 25.318197642612027 26.66161038444323 24.815835281245338 46 24.210175560749988 25.41838663152136 26.742229074451686 23.62920873327697 47 23.558412493161583 25.895459292783606 27.90550554533247 22.640622668722337 48 24.268065847714727 25.26493261053365 27.714079673745463 22.75292186800617 49 24.72798030536629 24.72004774456657 27.437384990301883 23.11458695976526 50 23.13888198139951 25.933182473765353 27.890411299547424 23.03752424528771 51 23.55234495449346 25.50280996667827 26.833814094593922 24.111030984234347 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2200.0 1 3873.0 2 5546.0 3 30806.0 4 56066.0 5 39292.0 6 22518.0 7 22399.0 8 22280.0 9 23265.0 10 24250.0 11 24098.0 12 23946.0 13 23876.5 14 23807.0 15 23215.5 16 22624.0 17 21659.5 18 20695.0 19 20469.5 20 20244.0 21 19809.0 22 19374.0 23 19811.5 24 20249.0 25 22036.0 26 25818.5 27 27814.0 28 30880.0 29 33946.0 30 39126.5 31 44307.0 32 51904.0 33 59501.0 34 67326.5 35 75152.0 36 84621.5 37 94091.0 38 104530.5 39 114970.0 40 132772.5 41 150575.0 42 174390.5 43 198206.0 44 225856.0 45 253506.0 46 274671.5 47 295837.0 48 290919.5 49 286002.0 50 280055.0 51 274108.0 52 266588.0 53 259068.0 54 249946.5 55 240825.0 56 228984.0 57 217143.0 58 214023.0 59 210903.0 60 200578.5 61 190254.0 62 178253.0 63 166252.0 64 152467.5 65 138683.0 66 124538.0 67 110393.0 68 97118.5 69 83844.0 70 73516.0 71 63188.0 72 54360.5 73 45533.0 74 39937.5 75 29172.5 76 24003.0 77 17728.5 78 11454.0 79 8438.0 80 5422.0 81 4078.5 82 2735.0 83 1824.5 84 914.0 85 644.0 86 374.0 87 339.5 88 305.0 89 188.0 90 71.0 91 51.0 92 31.0 93 26.0 94 21.0 95 11.5 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4021400.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.919505389117887 #Duplication Level Percentage of deduplicated Percentage of total 1 77.92077201754704 17.079847821628487 2 6.942636083323187 3.043582980861738 3 2.4658242741441416 1.6214894539716065 4 1.3040151367117532 1.143334672665783 5 0.8716888794891492 0.955349454579827 6 0.6803529332355818 0.8947799871935697 7 0.5494912311866179 0.8431203202287667 8 0.44897000242615315 0.7872960310185868 9 0.39786998184016853 0.7849001890002429 >10 6.22847855807352 34.8163582722149 >50 1.9868390428915028 29.423067959976795 >100 0.19603734592006572 6.206799078529667 >500 0.0047213941255178984 0.7375600079625909 >1k 0.0021879631313281365 0.8118965659151594 >5k 0.0 0.0 >10k+ 1.1515595428042823E-4 0.8506172042522914 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 33699 0.8379917441686974 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.973392350922564E-5 0.0 0.0 0.06002884567563535 0.0 2 4.973392350922564E-5 0.0 0.0 0.17695329984582484 0.0 3 4.973392350922564E-5 0.0 0.0 0.27933058138956585 0.0 4 4.973392350922564E-5 0.0 0.0 0.48532849256477845 0.0 5 4.973392350922564E-5 0.0 0.0 0.831277664494952 0.0 6 4.973392350922564E-5 0.0 0.0 1.627741582533446 0.0 7 4.973392350922564E-5 0.0 0.0 2.0042771174217933 0.0 8 4.973392350922564E-5 0.0 0.0 2.9680956880688316 0.0 9 4.973392350922564E-5 0.0 0.0 3.5106181926692197 0.0 10 4.973392350922564E-5 0.0 0.0 4.287089073457005 0.0 11 4.973392350922564E-5 0.0 0.0 4.815984483015865 0.0 12 4.973392350922564E-5 0.0 0.0 5.238200626647436 0.0 13 4.973392350922564E-5 0.0 0.0 5.480504301984384 0.0 14 4.973392350922564E-5 0.0 0.0 5.619610086039688 0.0 15 7.460088526383847E-5 0.0 0.0 5.738349828417964 0.0 16 9.946784701845128E-5 0.0 0.0 5.939051076739444 0.0 17 9.946784701845128E-5 0.0 0.0 6.146590739543442 0.0 18 9.946784701845128E-5 0.0 0.0 6.42582185308599 0.0 19 9.946784701845128E-5 0.0 0.0 6.580693290893719 0.0 20 9.946784701845128E-5 0.0 0.0 6.74280101457204 0.0 21 9.946784701845128E-5 0.0 0.0 6.93547023424678 0.0 22 9.946784701845128E-5 0.0 0.0 7.1379867707763465 0.0 23 9.946784701845128E-5 0.0 0.0 7.369523051673546 0.0 24 9.946784701845128E-5 0.0 0.0 7.558387626199831 0.0 25 9.946784701845128E-5 0.0 0.0 7.730690804197543 0.0 26 1.243348087730641E-4 0.0 0.0 7.888024071218979 0.0 27 1.243348087730641E-4 0.0 0.0 8.05515492117173 0.0 28 1.243348087730641E-4 0.0 0.0 8.221514895310092 0.0 29 1.243348087730641E-4 0.0 0.0 8.408539314666534 0.0 30 1.243348087730641E-4 0.0 0.0 8.684786392798529 0.0 31 1.7406873228228975E-4 0.0 0.0 8.889565822847764 0.0 32 1.7406873228228975E-4 0.0 0.0 9.132242502611032 0.0 33 1.7406873228228975E-4 0.0 0.0 9.341746655393644 0.0 34 1.7406873228228975E-4 0.0 0.0 9.550554533247128 0.0 35 1.7406873228228975E-4 0.0 0.0 9.782936290843985 0.0 36 1.7406873228228975E-4 0.0 0.0 9.987094046849355 0.0 37 2.2380265579151538E-4 0.0 0.0 10.19266921967474 0.0 38 2.2380265579151538E-4 0.0 0.0 10.445242950216343 0.0 39 2.2380265579151538E-4 0.0 0.0 10.804222410105933 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 21450 0.0 42.241257 1 TCAAGCG 4765 0.0 38.294857 17 CACGACC 4830 0.0 37.872673 27 AGGGCGA 6135 0.0 37.811737 6 GGCGATA 2275 0.0 37.780216 8 GGGCGAT 12340 0.0 37.72488 7 TCGTTAG 150 0.0 37.5 1 ACGACCA 4860 0.0 37.36111 28 AACACGT 4410 0.0 37.19388 41 ACACGAC 4925 0.0 37.050762 26 GTTGATC 2420 0.0 37.00413 16 GACACGA 4915 0.0 36.98881 25 CGAGACA 4940 0.0 36.983807 22 GCGAGAC 4945 0.0 36.900906 21 CATATGC 2335 0.0 36.80942 33 GACCGAT 3065 0.0 36.77814 9 AGACACG 4945 0.0 36.764404 24 TGGTCAA 4975 0.0 36.723618 14 GTCAAGC 4955 0.0 36.690212 16 ACACGTG 4465 0.0 36.634937 42 >>END_MODULE