##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547014_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2520983 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.61252852557911 31.0 31.0 33.0 30.0 34.0 2 31.983074856117632 31.0 31.0 34.0 30.0 34.0 3 32.08664318640784 33.0 31.0 34.0 30.0 34.0 4 35.7581110225654 37.0 35.0 37.0 35.0 37.0 5 35.709767182087305 37.0 35.0 37.0 33.0 37.0 6 35.762690188708135 37.0 35.0 37.0 33.0 37.0 7 36.101390211675366 37.0 35.0 37.0 35.0 37.0 8 36.03352303446711 37.0 35.0 37.0 35.0 37.0 9 37.81143506322732 39.0 38.0 39.0 35.0 39.0 10 37.33464565211269 39.0 37.0 39.0 34.0 39.0 11 37.08997164994766 39.0 37.0 39.0 33.0 39.0 12 36.50504148580137 39.0 35.0 39.0 33.0 39.0 13 36.29008882646174 39.0 35.0 39.0 32.0 39.0 14 37.311929513209726 40.0 35.0 41.0 32.0 41.0 15 37.46120104736922 40.0 35.0 41.0 32.0 41.0 16 37.567434211178735 40.0 35.0 41.0 33.0 41.0 17 37.50585347065014 39.0 35.0 41.0 33.0 41.0 18 37.44787767311402 39.0 35.0 41.0 33.0 41.0 19 37.39589279261304 39.0 35.0 41.0 33.0 41.0 20 37.26257455920964 39.0 35.0 41.0 32.0 41.0 21 37.18539117479174 39.0 35.0 41.0 32.0 41.0 22 37.09850324258434 39.0 35.0 41.0 32.0 41.0 23 37.02574075271432 39.0 35.0 41.0 32.0 41.0 24 36.92679839570517 38.0 35.0 41.0 32.0 41.0 25 36.80077533247943 38.0 35.0 41.0 32.0 41.0 26 36.657178568836045 38.0 35.0 41.0 31.0 41.0 27 36.564137877962686 38.0 35.0 41.0 31.0 41.0 28 36.59282272034361 38.0 35.0 41.0 31.0 41.0 29 36.60560067243611 38.0 35.0 41.0 31.0 41.0 30 36.52132243652575 38.0 35.0 41.0 31.0 41.0 31 36.399540576037204 38.0 35.0 41.0 31.0 41.0 32 36.258135417811225 38.0 35.0 41.0 30.0 41.0 33 36.0865341019753 38.0 35.0 41.0 30.0 41.0 34 35.92775952872352 38.0 35.0 41.0 30.0 41.0 35 35.767294345102684 38.0 35.0 41.0 29.0 41.0 36 35.689904295268946 38.0 35.0 41.0 29.0 41.0 37 35.55317231413302 38.0 35.0 40.0 29.0 41.0 38 35.46567906249269 38.0 35.0 40.0 28.0 41.0 39 35.363028231447814 38.0 35.0 40.0 27.0 41.0 40 35.23221259326223 37.0 34.0 40.0 27.0 41.0 41 35.17184447495283 37.0 34.0 40.0 27.0 41.0 42 35.10548781963226 37.0 34.0 40.0 27.0 41.0 43 34.985964601903305 37.0 34.0 40.0 26.0 41.0 44 34.846338908275065 37.0 34.0 40.0 26.0 41.0 45 34.72595412186437 36.0 34.0 40.0 26.0 41.0 46 34.68110851997019 36.0 34.0 40.0 26.0 41.0 47 34.60287276828126 36.0 34.0 40.0 26.0 41.0 48 34.50682690045907 36.0 34.0 40.0 25.0 41.0 49 34.42362205536491 36.0 34.0 40.0 24.0 41.0 50 34.298382813370814 35.0 34.0 40.0 24.0 41.0 51 33.93749422348346 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 1.0 11 4.0 12 6.0 13 11.0 14 26.0 15 79.0 16 206.0 17 508.0 18 1084.0 19 2178.0 20 3670.0 21 5897.0 22 8897.0 23 13323.0 24 19478.0 25 26926.0 26 34035.0 27 39663.0 28 43689.0 29 49611.0 30 57664.0 31 68939.0 32 83808.0 33 109766.0 34 194668.0 35 332925.0 36 181731.0 37 231039.0 38 346978.0 39 663717.0 40 453.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.359738641633044 23.930387471871093 27.872936866293823 12.836937020202042 2 31.4470585481933 25.88962321443659 28.681867350950007 13.981450886420099 3 30.15902923581793 25.5124290802437 29.912815754806754 14.415725929131613 4 25.70687703963097 29.640779013583195 29.13355623580167 15.518787710984167 5 23.595359429238517 33.17249660152409 28.322087058897267 14.910056910340133 6 21.544730765737015 42.207860981212484 25.353602146464294 10.8938061065862 7 87.70344742507189 3.857622205306422 6.717459022928754 1.721471346692937 8 87.56564403647307 3.2498830813218493 6.009917559935945 3.1745553222691307 9 82.27949176967874 4.944737826474832 9.18824125351103 3.587529150335405 10 45.31057924627021 23.464180440724906 15.51248064742999 15.712759665574897 11 38.08673045395388 24.644196331351697 21.575393408047574 15.693679806646852 12 33.70800199763346 22.001933372815287 24.974900663749022 19.315163965802228 13 23.335698812725035 31.79390737660667 27.570872155821757 17.299521654846544 14 19.692199431729605 33.300740227125694 28.411298291182447 18.595762049962257 15 18.9835472908782 24.16259847845067 39.09070390399301 17.763150326678126 16 21.035683302902083 20.726042182751726 38.764759619561104 19.47351489478509 17 20.828383214008188 22.01403182806072 28.40550689949119 28.7520780584399 18 23.43264512295402 22.79265667400375 31.80180112281598 21.972897080226243 19 27.061428022323035 26.56733504351279 25.553841497542823 20.81739543662135 20 28.866517544941793 25.08374709389155 24.664862872934883 21.384872488231775 21 24.859072829923885 28.60304889005598 26.97991220091528 19.557966079104858 22 24.651812408096365 24.187033391339806 25.851701498978773 25.309452701585055 23 22.800233083682038 28.98686742433408 25.023968824859192 23.188930667124687 24 22.572107784939448 25.371095322737204 32.54781964019591 19.508977252127444 25 22.23581039618276 25.07855070819597 30.403973370705 22.28166552491627 26 20.22151676548394 29.413804059765575 26.894826343533456 23.46985283121703 27 21.464880961117153 28.216929665927932 26.899943395096276 23.418245977858636 28 19.516434660606595 28.608681613481725 31.228294677116033 20.64658904879565 29 21.017555453567123 25.029522214152177 30.34645612445621 23.606466207824486 30 23.622333034375874 26.521916252509435 28.578375974768573 21.277374738346115 31 27.40728517407694 26.053844869243463 24.733566231902397 21.8053037247772 32 29.02066376488854 25.388191828346322 24.382116023789134 21.209028382976005 33 27.206093813405325 26.045871788901394 24.286240724352364 22.461793673340917 34 23.652242002425243 26.23964540816023 27.670396825365344 22.43771576404918 35 21.890310248026264 26.828344340283135 28.743113301438367 22.53823211025223 36 29.392026840323794 25.59227888486356 24.427455480659727 20.588238794152915 37 23.461879750874957 29.45240011535183 26.8287806780133 20.256939455759916 38 24.22689879305017 28.673576934076905 25.68315613393664 21.416368138936278 39 22.80824583109049 28.64077227018191 25.71036774147227 22.840614157255324 40 25.564353270133118 24.25498307604613 26.698474364960017 23.482189288860734 41 19.94916268772935 24.31361100015351 27.73394346570366 28.00328284641348 42 24.118012695841266 25.925006237646187 25.109689355303072 24.847291711209476 43 22.148384181884605 25.259710200346454 27.83374580471189 24.75815981305705 44 22.526173322073177 26.969598763656876 26.972296124170615 23.53193179009934 45 20.756784159195043 28.025813740116455 26.143452772192433 25.073949328496063 46 24.391477451454453 26.644090816955135 26.64928720265071 22.315144528939705 47 23.187661321000576 25.11909045003477 28.082220308506646 23.61102792045801 48 24.223090754677838 23.914163641722297 28.86735055333574 22.995395050264122 49 23.529234429585603 23.28476629949508 28.936053912303255 24.249945358616063 50 21.87539543106796 26.949289225671098 28.047075287695318 23.128240055565627 51 21.49292557704673 27.446555569791624 26.327745962586818 24.73277289057483 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1479.0 1 2298.5 2 3118.0 3 10653.5 4 18189.0 5 13396.5 6 8604.0 7 8949.0 8 9294.0 9 10194.0 10 11094.0 11 11433.5 12 11773.0 13 12004.0 14 12235.0 15 11918.5 16 11602.0 17 11782.0 18 11962.0 19 11522.5 20 11083.0 21 11092.0 22 11101.0 23 11472.5 24 11844.0 25 12624.0 26 14775.5 27 16147.0 28 18641.5 29 21136.0 30 25058.5 31 28981.0 32 33021.5 33 37062.0 34 42618.0 35 48174.0 36 54047.5 37 59921.0 38 71483.0 39 83045.0 40 100075.5 41 117106.0 42 141708.5 43 166311.0 44 178128.0 45 189945.0 46 202229.5 47 214514.0 48 222245.5 49 229977.0 50 219593.0 51 209209.0 52 192728.0 53 176247.0 54 161964.5 55 147682.0 56 137753.0 57 127824.0 58 117633.5 59 107443.0 60 100638.5 61 93834.0 62 87787.0 63 81740.0 64 70609.5 65 59479.0 66 51169.0 67 42859.0 68 38464.5 69 34070.0 70 30732.5 71 27395.0 72 22924.5 73 18454.0 74 17206.0 75 12694.5 76 9431.0 77 7398.0 78 5365.0 79 4064.0 80 2763.0 81 1965.0 82 1167.0 83 888.0 84 609.0 85 422.5 86 236.0 87 148.0 88 60.0 89 47.5 90 35.0 91 25.5 92 16.0 93 10.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2520983.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.116098844692 #Duplication Level Percentage of deduplicated Percentage of total 1 79.52772681131344 15.997876134300437 2 7.8904994002155755 3.1745213173743894 3 2.5783495449764753 1.5559900290874027 4 1.284801057724662 1.0338074029181654 5 0.8333420521470285 0.838179554621405 6 0.5708470363212514 0.6889929244702669 7 0.430979833241173 0.6068743047883818 8 0.31725296258616675 0.5105513563323764 9 0.2934228484765621 0.5312270720921047 >10 3.4132321846095866 16.675906859318083 >50 1.6789274999733588 24.850794144126205 >100 1.1750319319827416 31.729527226854692 >500 0.0031924779611506348 0.4320414104754618 >1k 0.002194828598291061 0.9748225321643943 >5k 1.9952987257191467E-4 0.3988877310762857 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9938 0.3942113056692568 No Hit GAGAGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTT 3920 0.15549490020361106 No Hit GAGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCT 3048 0.12090521832158328 No Hit AAGAGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTT 2702 0.1071804133546319 No Hit TAGAGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTT 2654 0.10527639416846524 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2527 0.10023867673839926 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1900119913541662E-4 0.0 0.0 0.092067261064434 0.0 2 1.1900119913541662E-4 0.0 0.0 0.27144173522788534 0.0 3 1.1900119913541662E-4 0.0 0.0 0.3906412696951943 0.0 4 1.1900119913541662E-4 0.0 0.0 0.7831865585765553 0.0 5 1.1900119913541662E-4 0.0 0.0 1.251654612506312 0.0 6 1.1900119913541662E-4 0.0 0.0 2.314811325582124 0.0 7 1.1900119913541662E-4 0.0 0.0 2.736670576517176 0.0 8 1.1900119913541662E-4 0.0 0.0 4.012918770178141 0.0 9 1.1900119913541662E-4 0.0 0.0 4.574564763030929 0.0 10 1.1900119913541662E-4 0.0 0.0 5.448747571879699 0.0 11 1.1900119913541662E-4 0.0 0.0 6.17413921474282 0.0 12 1.5866826551388884E-4 0.0 0.0 6.756332747979657 0.0 13 1.5866826551388884E-4 0.0 0.0 7.033169204235015 0.0 14 1.5866826551388884E-4 0.0 0.0 7.151496063241997 0.0 15 1.5866826551388884E-4 0.0 0.0 7.280136359507383 0.0 16 1.5866826551388884E-4 0.0 0.0 7.525794501589261 0.0 17 1.5866826551388884E-4 0.0 0.0 7.783471764783816 0.0 18 1.5866826551388884E-4 0.0 0.0 8.139920023260768 0.0 19 1.5866826551388884E-4 0.0 0.0 8.309734734427007 0.0 20 1.5866826551388884E-4 0.0 0.0 8.495178269746365 0.0 21 1.5866826551388884E-4 0.0 0.0 8.733061666818063 0.0 22 1.5866826551388884E-4 0.0 0.0 8.970350057894084 0.0 23 1.5866826551388884E-4 0.0 0.0 9.236714408625524 0.0 24 1.5866826551388884E-4 0.0 0.0 9.454010598246795 0.0 25 1.5866826551388884E-4 0.0 0.0 9.628585357378451 0.0 26 1.5866826551388884E-4 0.0 0.0 9.799233076938638 0.0 27 1.5866826551388884E-4 0.0 0.0 9.968690784507471 0.0 28 1.9833533189236104E-4 0.0 0.0 10.134538789035863 0.0 29 1.9833533189236104E-4 0.0 0.0 10.317602300372513 0.0 30 1.9833533189236104E-4 0.0 0.0 10.570519515601653 0.0 31 1.9833533189236104E-4 0.0 0.0 10.776074253574896 0.0 32 1.9833533189236104E-4 0.0 0.0 10.975282260927582 0.0 33 1.9833533189236104E-4 0.0 0.0 11.178218972519847 0.0 34 1.9833533189236104E-4 0.0 0.0 11.381116017045732 0.0 35 1.9833533189236104E-4 0.0 0.0 11.612811351762389 0.0 36 1.9833533189236104E-4 0.0 0.0 11.806307301556576 0.0 37 1.9833533189236104E-4 0.0 0.0 12.002421277731742 0.0 38 1.9833533189236104E-4 0.0 0.0 12.226183199172704 0.0 39 1.9833533189236104E-4 0.0 0.0 12.530112261764558 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGA 30 2.1665364E-6 45.000004 42 CGTTAGT 30 2.1665364E-6 45.000004 25 CGTTTTT 7410 0.0 42.14575 1 CTAGACG 50 1.0822987E-9 40.5 1 TCCCGAA 45 1.9299478E-8 40.000004 29 CGTAAGG 425 0.0 39.705883 2 TTACGAG 85 0.0 39.705883 1 GTATGCG 160 0.0 39.375004 1 GGGCGAT 5720 0.0 39.375 7 TACGGGA 625 0.0 39.24 4 AGGGCGA 3090 0.0 38.73786 6 TCGTTAG 105 0.0 38.57143 1 CGTAGCA 35 6.2512554E-6 38.57143 15 TACGTCC 35 6.2512554E-6 38.57143 24 TCACGAC 175 0.0 38.571426 25 CACGACG 175 0.0 38.571426 26 TTACGGG 655 0.0 38.129772 3 TTGATCC 1475 0.0 37.52542 17 CGGGTAC 270 0.0 37.500004 6 TAATTCG 30 1.1403084E-4 37.500004 28 >>END_MODULE