##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547013_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1323275 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.598440233511553 31.0 31.0 33.0 30.0 34.0 2 31.983316393039996 31.0 31.0 34.0 30.0 34.0 3 32.091550131303016 33.0 31.0 34.0 30.0 34.0 4 35.76334246471822 37.0 35.0 37.0 35.0 37.0 5 35.72244393644556 37.0 35.0 37.0 33.0 37.0 6 35.77102643063611 37.0 35.0 37.0 33.0 37.0 7 36.09463792484556 37.0 35.0 37.0 35.0 37.0 8 36.023010334208685 37.0 35.0 37.0 35.0 37.0 9 37.788793712569195 39.0 38.0 39.0 35.0 39.0 10 37.27366496004232 39.0 37.0 39.0 34.0 39.0 11 37.06063365513593 39.0 37.0 39.0 33.0 39.0 12 36.57159093914719 39.0 35.0 39.0 33.0 39.0 13 36.39737771816138 39.0 35.0 39.0 32.0 39.0 14 37.45320889459863 40.0 35.0 41.0 32.0 41.0 15 37.600103531012074 40.0 35.0 41.0 33.0 41.0 16 37.687359014566134 40.0 35.0 41.0 33.0 41.0 17 37.62981542007519 40.0 35.0 41.0 33.0 41.0 18 37.52637282499858 39.0 36.0 41.0 33.0 41.0 19 37.48927320473825 39.0 35.0 41.0 33.0 41.0 20 37.357333131813114 39.0 35.0 41.0 32.0 41.0 21 37.270409400918176 39.0 35.0 41.0 32.0 41.0 22 37.19212181897187 39.0 35.0 41.0 32.0 41.0 23 37.091094443709736 39.0 35.0 41.0 32.0 41.0 24 36.97411951408437 39.0 35.0 41.0 32.0 41.0 25 36.83957756324271 38.0 35.0 41.0 32.0 41.0 26 36.70126315391737 38.0 35.0 41.0 31.0 41.0 27 36.62800627231679 38.0 35.0 41.0 31.0 41.0 28 36.642845213579946 38.0 35.0 41.0 31.0 41.0 29 36.648115471085 38.0 35.0 41.0 31.0 41.0 30 36.556139124520605 38.0 35.0 41.0 31.0 41.0 31 36.42190398821107 38.0 35.0 41.0 31.0 41.0 32 36.31323572197767 38.0 35.0 41.0 30.0 41.0 33 36.19315410628932 38.0 35.0 41.0 30.0 41.0 34 36.0188441555988 38.0 35.0 41.0 30.0 41.0 35 35.91227749334038 38.0 35.0 41.0 30.0 41.0 36 35.78938618201054 38.0 35.0 41.0 29.0 41.0 37 35.70098203321305 38.0 35.0 41.0 29.0 41.0 38 35.5941999962215 38.0 35.0 41.0 29.0 41.0 39 35.48263512875253 38.0 35.0 40.0 28.0 41.0 40 35.32489013999358 38.0 35.0 40.0 27.0 41.0 41 35.23760216130434 38.0 34.0 40.0 27.0 41.0 42 35.132942132209855 37.0 34.0 40.0 27.0 41.0 43 35.004970999981104 37.0 34.0 40.0 26.0 41.0 44 34.79250647068825 37.0 34.0 40.0 25.0 41.0 45 34.70841435075854 37.0 34.0 40.0 24.0 41.0 46 34.664901853356255 36.0 34.0 40.0 24.0 41.0 47 34.61842625304642 36.0 34.0 40.0 25.0 41.0 48 34.519478566435545 36.0 34.0 40.0 24.0 41.0 49 34.420428860214244 36.0 34.0 40.0 24.0 41.0 50 34.3008082220249 36.0 34.0 40.0 24.0 41.0 51 33.93442784001814 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 4.0 11 2.0 12 4.0 13 7.0 14 12.0 15 38.0 16 109.0 17 272.0 18 589.0 19 1244.0 20 1933.0 21 3249.0 22 4684.0 23 7252.0 24 10317.0 25 14358.0 26 17905.0 27 20809.0 28 23228.0 29 25794.0 30 29493.0 31 35091.0 32 43397.0 33 56858.0 34 98462.0 35 160664.0 36 98372.0 37 126979.0 38 185025.0 39 356866.0 40 256.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.25850635733313 24.318376754642838 27.11469649165895 13.308420396365078 2 32.30620997147229 26.036235854225314 27.633258393002208 14.024295781300184 3 30.946628629725492 25.630046664525512 29.496589900058567 13.926734805690428 4 24.877217509587954 30.12873363435416 29.17723073435227 15.816818121705618 5 24.24008614989326 33.121913434471296 27.97778239594944 14.660218019686006 6 22.43668171770796 41.867336721392 24.997978500311728 10.698003060588313 7 87.6053730328163 3.7721562033590903 6.878691126183144 1.7437796376414578 8 87.10744176380571 3.4227201450945572 6.271938939373902 3.197899151725832 9 81.39283217774084 5.082616991932894 9.924769983563507 3.5997808467627666 10 44.46498271334379 22.964841019440403 19.2235929795394 13.346583287676408 11 36.97364493397064 25.36653378927283 22.02928340669929 15.630537870057246 12 31.269086168785776 23.613232321323988 25.9099582475298 19.20772326236043 13 23.249362377434775 30.723545748238273 28.935028622168485 17.09206325215847 14 19.94778107347301 32.50435472596399 29.442028300995638 18.10583589956736 15 19.48521660274697 24.053503617917666 38.50152084789632 17.959758931439044 16 21.935123084770737 21.67448187262663 36.845100224820996 19.54529481778164 17 22.11694470159264 22.808410950104854 28.142374034119893 26.932270314182617 18 23.469875876140637 23.22918516559294 31.538644650582835 21.76229430768359 19 27.156033326406074 26.32302431467382 25.788063705578963 20.732878653341142 20 28.715875384935103 25.23164119325159 25.164232680281877 20.88825074153143 21 25.354971566756724 27.938108103002023 26.857304793032437 19.84961553720882 22 25.30925166726493 24.18756494303905 26.14430107120591 24.35888231849011 23 22.965672290340255 28.28074285390414 25.18781054580492 23.56577430995069 24 22.388694715762032 25.53414823071546 32.07806389450417 19.999093159018344 25 22.25750505374922 25.613874667019328 30.012355708375054 22.116264570856398 26 21.14057924467703 29.2776633730706 27.203491337779372 22.378266044472994 27 22.149137556441406 27.664393266705712 27.34034875592753 22.846120420925356 28 20.354877104154465 27.975137443086282 31.076835880674842 20.593149572084414 29 20.98362018476885 25.612363265383237 29.946836447450455 23.45718010239746 30 22.624322230828813 27.357049744006346 28.54894107422871 21.469686950936122 31 27.052502314333754 26.196746707978313 24.52974627345034 22.221004704237593 32 26.64472615291606 26.556233587122858 24.99933876178421 21.799701498176873 33 26.360507075248908 25.646823222686137 24.459012676881223 23.53365702518373 34 21.777257183880902 28.149704332054938 26.60678997185014 23.466248512214012 35 22.068428709074077 26.562052483421812 27.898660520300012 23.470858287204095 36 26.513460920821448 26.837127581190607 25.465077175946043 21.184334322041902 37 22.23717670174378 28.040127713438252 26.511496098694526 23.211199486123444 38 23.00345733124256 28.46974362849748 25.832121063271053 22.69467797698891 39 22.620241446411367 26.811736033704257 26.631123538191233 23.936898981693147 40 24.740737941848824 24.55302185864616 27.379494058302317 23.326746141202698 41 20.581133929077478 24.304396289508983 28.366439326670573 26.748030454742967 42 23.830420736430447 25.806578375621093 26.315845156902384 24.04715573104608 43 22.781281290736995 24.49400162475676 28.363265383234776 24.361451701271466 44 22.67895939997355 26.79329693374393 27.397630877935423 23.130112788347095 45 21.04520980143961 27.8640494228335 26.290982599988666 24.799758175738226 46 23.331129205947367 27.2350796319737 26.69089947289868 22.742891689180254 47 23.01932704842153 25.46719313823657 27.699684494908468 23.81379531843343 48 23.902892444881072 24.243562373656268 28.732274092686705 23.121271088775956 49 23.315712909259222 23.644820615518316 29.36902760197238 23.67043887325008 50 21.92741493642667 26.634373051708828 28.27401711662353 23.164194895240975 51 21.36842304131794 27.97151007915966 26.41831818782944 24.24174869169296 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 827.0 1 1389.0 2 1951.0 3 6312.5 4 10674.0 5 7783.5 6 4893.0 7 5070.5 8 5248.0 9 5869.0 10 6490.0 11 6695.5 12 6901.0 13 6933.0 14 6965.0 15 6898.0 16 6831.0 17 6700.5 18 6570.0 19 6552.5 20 6535.0 21 6337.0 22 6139.0 23 6373.0 24 6607.0 25 7815.5 26 10223.5 27 11423.0 28 12173.5 29 12924.0 30 15833.0 31 18742.0 32 20637.5 33 22533.0 34 25653.0 35 28773.0 36 31224.0 37 33675.0 38 37907.0 39 42139.0 40 52184.5 41 62230.0 42 73087.0 43 83944.0 44 88319.0 45 92694.0 46 99308.0 47 105922.0 48 110253.0 49 114584.0 50 110126.5 51 105669.0 52 96433.5 53 87198.0 54 80888.0 55 74578.0 56 68689.0 57 62800.0 58 59362.5 59 55925.0 60 53404.5 61 50884.0 62 47100.5 63 43317.0 64 38289.5 65 33262.0 66 30221.5 67 27181.0 68 23373.5 69 19566.0 70 17394.5 71 15223.0 72 12874.5 73 10526.0 74 9766.0 75 7448.0 76 5890.0 77 4631.5 78 3373.0 79 2639.5 80 1906.0 81 1413.5 82 921.0 83 722.5 84 524.0 85 342.5 86 161.0 87 113.5 88 66.0 89 48.5 90 31.0 91 25.5 92 20.0 93 12.0 94 4.0 95 4.5 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1323275.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.242551160793358 #Duplication Level Percentage of deduplicated Percentage of total 1 78.47343560201345 19.02396277345034 2 6.465371196849007 3.1347418402626364 3 2.3166866656546707 1.6848718504698341 4 1.3553084713180195 1.3142453981833488 5 0.8999541659488377 1.0908592455191908 6 0.6972290133064787 1.014156601552307 7 0.5556019025435837 0.9428445283212867 8 0.47192680339509735 0.9152567740364252 9 0.425067496900449 0.9274248486359555 >10 6.675361118883362 41.56236988879195 >50 1.5906156687436674 24.60313701761136 >100 0.07030335194585083 2.516249268909716 >500 0.001255416999024366 0.2339653019823923 >1k 0.0015692712487804575 0.5787122233749841 >5k 3.138542497560915E-4 0.4572024388982749 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6009 0.4541006215639228 No Hit GAGAGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTT 2122 0.16035971358938997 No Hit TAGAGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTT 1514 0.11441310385218492 No Hit GAGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCT 1509 0.11403525344316186 No Hit AAGAGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTT 1416 0.1070072358353328 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.557008180461355E-5 0.0 0.0 0.0696756154238537 0.0 2 7.557008180461355E-5 0.0 0.0 0.21235192987096407 0.0 3 7.557008180461355E-5 0.0 0.0 0.3220041185694584 0.0 4 7.557008180461355E-5 0.0 0.0 0.685193931722431 0.0 5 7.557008180461355E-5 0.0 0.0 1.1043056054108178 0.0 6 7.557008180461355E-5 0.0 0.0 2.1610776293665337 0.0 7 7.557008180461355E-5 0.0 0.0 2.579509172318679 0.0 8 7.557008180461355E-5 0.0 0.0 3.7752545767130794 0.0 9 7.557008180461355E-5 0.0 0.0 4.326991743968563 0.0 10 7.557008180461355E-5 0.0 0.0 5.129319302488145 0.0 11 7.557008180461355E-5 0.0 0.0 5.744686478623113 0.0 12 7.557008180461355E-5 0.0 0.0 6.243675728778976 0.0 13 7.557008180461355E-5 0.0 0.0 6.514745612212125 0.0 14 7.557008180461355E-5 0.0 0.0 6.633995201299806 0.0 15 7.557008180461355E-5 0.0 0.0 6.75233794940583 0.0 16 1.511401636092271E-4 0.0 0.0 6.973984999338762 0.0 17 1.511401636092271E-4 0.0 0.0 7.199410553361924 0.0 18 1.511401636092271E-4 0.0 0.0 7.506451795734069 0.0 19 1.511401636092271E-4 0.0 0.0 7.654115735580284 0.0 20 1.511401636092271E-4 0.0 0.0 7.827171222912849 0.0 21 1.511401636092271E-4 0.0 0.0 8.0262228183862 0.0 22 1.511401636092271E-4 0.0 0.0 8.234040543348888 0.0 23 1.511401636092271E-4 0.0 0.0 8.465587273998224 0.0 24 1.511401636092271E-4 0.0 0.0 8.65602388014585 0.0 25 1.511401636092271E-4 0.0 0.0 8.820539948234494 0.0 26 1.511401636092271E-4 0.0 0.0 8.970773270862066 0.0 27 1.511401636092271E-4 0.0 0.0 9.128639171751903 0.0 28 1.511401636092271E-4 0.0 0.0 9.276454251761727 0.0 29 1.511401636092271E-4 0.0 0.0 9.449736449339706 0.0 30 1.511401636092271E-4 0.0 0.0 9.682416731216112 0.0 31 1.511401636092271E-4 0.0 0.0 9.868167992291852 0.0 32 1.511401636092271E-4 0.0 0.0 10.046059964859912 0.0 33 1.511401636092271E-4 0.0 0.0 10.234305038635204 0.0 34 1.511401636092271E-4 0.0 0.0 10.418469327993048 0.0 35 1.511401636092271E-4 0.0 0.0 10.62704275377378 0.0 36 1.511401636092271E-4 0.0 0.0 10.817932780412235 0.0 37 1.511401636092271E-4 0.0 0.0 11.012072320568286 0.0 38 1.511401636092271E-4 0.0 0.0 11.209839224650961 0.0 39 1.511401636092271E-4 0.0 0.0 11.490053087982467 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGATA 20 7.0336735E-4 45.000004 12 CGTACCG 20 7.0336735E-4 45.000004 37 CGATCGA 20 7.0336735E-4 45.000004 10 GTATCGT 25 3.891127E-5 45.0 31 TTAACGG 50 2.1827873E-11 45.0 2 ATACGAG 95 0.0 42.63158 1 GCGATAA 190 0.0 41.44737 9 CGTTTTT 4270 0.0 41.206085 1 AATACGG 55 6.184564E-11 40.909092 2 CGTAAGG 215 0.0 40.813957 2 AACACGT 760 0.0 39.967106 41 ACACGAC 775 0.0 39.48387 26 GACACGA 775 0.0 39.48387 25 CGGGTAT 80 0.0 39.375004 6 TACGTAG 80 0.0 39.375004 1 ACACGTG 785 0.0 38.980892 42 CGTATGG 145 0.0 38.793102 2 ACGATTC 35 6.249007E-6 38.571426 26 TACGATT 35 6.249007E-6 38.571426 25 AGACACG 825 0.0 38.454544 24 >>END_MODULE