##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547011_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1532613 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.562037513710244 31.0 31.0 33.0 30.0 34.0 2 31.938047634986784 31.0 31.0 34.0 30.0 34.0 3 31.993817747859374 33.0 31.0 34.0 30.0 34.0 4 35.714735552941285 37.0 35.0 37.0 33.0 37.0 5 35.671676411461995 37.0 35.0 37.0 33.0 37.0 6 35.73172875344265 37.0 35.0 37.0 33.0 37.0 7 36.077731951901754 37.0 35.0 37.0 35.0 37.0 8 36.00754985113659 37.0 35.0 37.0 35.0 37.0 9 37.76808561587302 39.0 38.0 39.0 35.0 39.0 10 37.295240872940525 39.0 37.0 39.0 34.0 39.0 11 37.03865359356863 39.0 37.0 39.0 33.0 39.0 12 36.65088642729769 39.0 35.0 39.0 33.0 39.0 13 36.52825794900605 39.0 35.0 39.0 32.0 39.0 14 37.64480465714437 40.0 36.0 41.0 33.0 41.0 15 37.74619620217237 40.0 36.0 41.0 33.0 41.0 16 37.817380512888775 40.0 36.0 41.0 33.0 41.0 17 37.75083729552079 40.0 36.0 41.0 33.0 41.0 18 37.65015760664956 39.0 36.0 41.0 33.0 41.0 19 37.561469203249615 39.0 36.0 41.0 33.0 41.0 20 37.3884418310428 39.0 35.0 41.0 33.0 41.0 21 37.31853703446336 39.0 35.0 41.0 32.0 41.0 22 37.229929538637606 39.0 35.0 41.0 32.0 41.0 23 37.12306564018444 39.0 35.0 41.0 32.0 41.0 24 37.01218311471976 39.0 35.0 41.0 32.0 41.0 25 36.88475107545088 38.0 35.0 41.0 32.0 41.0 26 36.725847294783485 38.0 35.0 41.0 31.0 41.0 27 36.632109345281556 38.0 35.0 41.0 31.0 41.0 28 36.63833922849408 38.0 35.0 41.0 31.0 41.0 29 36.6135841207141 38.0 35.0 41.0 31.0 41.0 30 36.515109163239515 38.0 35.0 41.0 31.0 41.0 31 36.3519910114295 38.0 35.0 41.0 30.0 41.0 32 36.20359347075876 38.0 35.0 41.0 30.0 41.0 33 35.96539830994517 38.0 35.0 41.0 30.0 41.0 34 35.73868484738156 38.0 35.0 41.0 28.0 41.0 35 35.57736297421462 38.0 35.0 41.0 27.0 41.0 36 35.431194959197136 38.0 35.0 41.0 27.0 41.0 37 35.335033697352166 38.0 35.0 41.0 26.0 41.0 38 35.213645584371264 38.0 35.0 41.0 26.0 41.0 39 35.10736239350704 38.0 34.0 40.0 25.0 41.0 40 34.95148742702822 38.0 34.0 40.0 24.0 41.0 41 34.86419533176347 38.0 34.0 40.0 24.0 41.0 42 34.75341459324696 37.0 34.0 40.0 23.0 41.0 43 34.6131926324519 37.0 34.0 40.0 23.0 41.0 44 34.46954449688212 37.0 34.0 40.0 23.0 41.0 45 34.352591293431544 37.0 34.0 40.0 23.0 41.0 46 34.27574345252194 36.0 34.0 40.0 23.0 41.0 47 34.202360282732826 36.0 34.0 40.0 23.0 41.0 48 34.083660389152385 36.0 33.0 40.0 23.0 41.0 49 33.96456704986843 36.0 33.0 40.0 22.0 41.0 50 33.83684400432464 36.0 33.0 40.0 22.0 41.0 51 33.45754733908691 35.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 2.0 13 8.0 14 19.0 15 47.0 16 107.0 17 338.0 18 730.0 19 1473.0 20 2569.0 21 4044.0 22 6069.0 23 9152.0 24 13566.0 25 19828.0 26 25926.0 27 28458.0 28 29431.0 29 31672.0 30 35469.0 31 41659.0 32 50029.0 33 64345.0 34 106915.0 35 169518.0 36 118174.0 37 150145.0 38 215020.0 39 407580.0 40 317.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.531434876253826 24.7324667088169 27.62791389607161 15.108184518857664 2 32.544419236950226 26.312774327243734 27.52058086418424 13.622225571621799 3 29.05410563527779 25.310107639697694 32.196451419895304 13.439335305129212 4 24.75171488170856 29.090122555400484 31.130037393653843 15.028125169237114 5 23.004894255757975 32.838165929690014 30.036545429276668 14.120394385275342 6 21.696801475649757 41.64880501470365 26.37645641789545 10.277937091751147 7 86.46957842586485 3.5169348035022536 8.32108301312856 1.6924037575043405 8 85.89135026259075 3.3425920307344383 7.825589369266736 2.9404683374080736 9 80.1577436704504 5.5279447583962815 10.676928878979886 3.637382692173432 10 42.02554721903051 28.906514560427194 15.85299093769921 13.214947282843092 11 33.051853272809254 25.863867786584088 24.73324968534131 16.351029255265352 12 30.80549362428741 21.72146523616856 28.085889914805627 19.387151224738407 13 23.204488021437896 29.064545322269876 29.28449647758436 18.446470178707866 14 19.970794975639645 30.707947798955114 29.373494809191886 19.947762416213354 15 18.74954734169683 25.059816144062463 37.39137016324408 18.799266350996632 16 20.36110877305621 22.27842253719628 37.175399138595324 20.185069551152182 17 20.647025700551932 22.931751198769685 30.017362504428714 26.40386059624967 18 22.021540989147294 23.72327521690081 31.482703069855205 22.772480724096688 19 25.278331842415536 27.21600299619017 26.328107617513357 21.17755754388094 20 27.90880672420239 24.454314298521545 25.993776641591843 21.64310233568422 21 24.917901649013807 27.367182713444294 27.063714062193128 20.651201575348768 22 24.51532121938154 24.618282632340975 25.46637670436046 25.40001944391702 23 23.076275615566356 28.849096281970727 24.97975679444191 23.094871308021006 24 22.11758610947447 25.386774091045815 32.0114079679606 20.48423183151911 25 22.571581997542758 25.71966961000592 28.861232418099025 22.847515974352298 26 21.521675726357532 29.512799382492517 26.8262111831232 22.13931370802675 27 21.93267315362717 28.119949393617304 26.479222086723787 23.468155366031738 28 20.516333869019775 28.264930546719885 30.18615919348198 21.032576390778363 29 21.381849168707298 24.8551982790176 29.617848732850366 24.145103819424733 30 23.55682745742076 27.054579336075058 28.025926962644842 21.362666243859344 31 24.998548231027662 27.66092940618408 24.482501453400175 22.858020909388085 32 27.700600216754 26.12910108422674 24.44752850197669 21.722770197042568 33 25.18939875885171 27.66203862292699 24.112088309312266 23.036474308909032 34 23.29948917306587 27.045575106044385 26.069138132065955 23.58579758882379 35 22.897691719958008 26.953314372251835 26.081209020150553 24.067784887639608 36 26.251506414208936 27.53806733989598 24.16448248840379 22.04594375749129 37 23.63988821705153 28.924001036138936 24.790667963797773 22.645442783011756 38 22.827158584717733 28.165753520295077 25.511854590819734 23.495233304167456 39 22.81821960273076 28.571009119719072 24.395395315059968 24.215375962490203 40 24.332496200932656 26.349900464109332 26.589491280577683 22.72811205438033 41 20.42981496307287 26.458081720564813 26.863859304338405 26.248244012023907 42 23.716619916443353 27.385974150030044 23.844767074271196 25.052638859255406 43 22.785660828924197 26.718225670798823 26.536183628874348 23.95992987140263 44 23.18615332115805 27.995456126236697 26.0988912399934 22.71949931261186 45 21.724727638353585 28.04021628421526 24.889127261741876 25.345928815689284 46 23.313778494636285 27.848974268129005 25.348603985481006 23.488643251753704 47 23.585667092736394 26.465976733852575 26.459451929482526 23.488904243928506 48 24.054474286724698 24.363880509952608 27.17483148061513 24.40681372270756 49 22.65536048565424 25.511332606470127 27.091574976853256 24.74173193102238 50 21.471565228795527 27.129418842199566 27.901759935482733 23.497255993522174 51 21.388243476989953 27.565993502599806 26.08597212734069 24.95979089306955 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1068.0 1 1519.5 2 1971.0 3 9398.5 4 16826.0 5 12195.0 6 7564.0 7 7854.5 8 8145.0 9 8883.5 10 9622.0 11 10003.5 12 10385.0 13 10557.5 14 10730.0 15 10558.5 16 10387.0 17 10378.5 18 10370.0 19 10173.0 20 9976.0 21 9597.0 22 9218.0 23 9133.0 24 9048.0 25 9483.0 26 10701.5 27 11485.0 28 13077.5 29 14670.0 30 16624.5 31 18579.0 32 20571.5 33 22564.0 34 27535.5 35 32507.0 36 35073.5 37 37640.0 38 41825.0 39 46010.0 40 56032.5 41 66055.0 42 75172.5 43 84290.0 44 91612.0 45 98934.0 46 100981.5 47 103029.0 48 112290.0 49 121551.0 50 124839.5 51 128128.0 52 121562.0 53 114996.0 54 103861.0 55 92726.0 56 85189.5 57 77653.0 58 73854.5 59 70056.0 60 67311.5 61 64567.0 62 57030.5 63 49494.0 64 45687.5 65 41881.0 66 36144.5 67 30408.0 68 26988.0 69 23568.0 70 20762.5 71 17957.0 72 15994.0 73 14031.0 74 12150.5 75 8532.5 76 6795.0 77 5434.0 78 4073.0 79 2991.5 80 1910.0 81 1381.0 82 852.0 83 607.5 84 363.0 85 281.5 86 200.0 87 137.5 88 75.0 89 55.5 90 36.0 91 30.5 92 25.0 93 15.0 94 5.0 95 3.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1532613.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.298955383141788 #Duplication Level Percentage of deduplicated Percentage of total 1 77.27374211580673 21.867661804236192 2 7.462679213516231 4.22372052203991 3 2.763433693088409 2.346068603549389 4 1.636739698848495 1.8527209484612197 5 1.1416869390581177 1.6154273874960694 6 0.8406501061543954 1.4273711908137987 7 0.6804553585329125 1.347932308193985 8 0.5773448409382326 1.307060471551851 9 0.4893941449721587 1.246440876600415 >10 6.046011128610401 40.588922833272804 >50 1.02905081737463 18.3389433964105 >100 0.055789985726958945 2.3493176366402055 >500 0.0013947495564607159 0.28885429077351565 >1k 0.0013947495564607159 0.5012684344555202 >5k 0.0 0.0 >10k+ 2.324582594101193E-4 0.6982892955046388 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10615 0.6926079838811233 No Hit GAGAGCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTT 1739 0.11346634799522122 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.524804370052975E-5 0.0 0.0 0.07699269156662511 0.0 2 6.524804370052975E-5 0.0 0.0 0.1999852539421237 0.0 3 6.524804370052975E-5 0.0 0.0 0.3285239000321673 0.0 4 6.524804370052975E-5 0.0 0.0 0.586906153086265 0.0 5 6.524804370052975E-5 0.0 0.0 0.9378753801514146 0.0 6 6.524804370052975E-5 0.0 0.0 1.89186702709686 0.0 7 6.524804370052975E-5 0.0 0.0 2.324657300962474 0.0 8 6.524804370052975E-5 0.0 0.0 3.56326091452963 0.0 9 6.524804370052975E-5 0.0 0.0 4.233097331159269 0.0 10 6.524804370052975E-5 0.0 0.0 5.1375004648923115 0.0 11 6.524804370052975E-5 0.0 0.0 5.847399180354075 0.0 12 6.524804370052975E-5 0.0 0.0 6.4271932966769825 0.0 13 6.524804370052975E-5 0.0 0.0 6.795583751410173 0.0 14 6.524804370052975E-5 0.0 0.0 6.988652712720041 0.0 15 6.524804370052975E-5 0.0 0.0 7.155165720243793 0.0 16 6.524804370052975E-5 0.0 0.0 7.404739487398319 0.0 17 6.524804370052975E-5 0.0 0.0 7.666579886768545 0.0 18 6.524804370052975E-5 0.0 0.0 7.999344909641247 0.0 19 6.524804370052975E-5 0.0 0.0 8.208464889701444 0.0 20 6.524804370052975E-5 0.0 0.0 8.426067115442711 0.0 21 6.524804370052975E-5 0.0 0.0 8.674662161941729 0.0 22 6.524804370052975E-5 0.0 0.0 8.950204650489066 0.0 23 6.524804370052975E-5 0.0 0.0 9.2498889152056 0.0 24 6.524804370052975E-5 0.0 0.0 9.4963307762625 0.0 25 6.524804370052975E-5 0.0 0.0 9.722937232034441 0.0 26 6.524804370052975E-5 0.0 0.0 9.932057212094639 0.0 27 6.524804370052975E-5 0.0 0.0 10.131520481687158 0.0 28 6.524804370052975E-5 0.0 0.0 10.340770957834756 0.0 29 6.524804370052975E-5 0.0 0.0 10.561374593586248 0.0 30 1.304960874010595E-4 0.0 0.0 10.871433297251166 0.0 31 1.304960874010595E-4 0.0 0.0 11.107826959578185 0.0 32 1.304960874010595E-4 0.0 0.0 11.350223441925653 0.0 33 1.304960874010595E-4 0.0 0.0 11.586747600340074 0.0 34 1.304960874010595E-4 0.0 0.0 11.822619278317488 0.0 35 1.304960874010595E-4 0.0 0.0 12.080479547021982 0.0 36 1.304960874010595E-4 0.0 0.0 12.33416394092964 0.0 37 1.304960874010595E-4 0.0 0.0 12.583150475690863 0.0 38 1.304960874010595E-4 0.0 0.0 12.844664634842585 0.0 39 1.304960874010595E-4 0.0 0.0 13.094434146128213 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 7815 0.0 42.955853 1 TGTAACG 105 0.0 42.857143 1 TACGGGA 370 0.0 40.743244 4 TAATCGT 345 0.0 40.43478 21 CACAACG 295 0.0 40.42373 12 TGCGTAG 135 0.0 40.0 1 CGAAAGG 240 0.0 39.374996 2 TCGTTGA 355 0.0 39.295776 24 TTAATCG 360 0.0 38.75 20 ACGGGAT 410 0.0 38.414635 5 CGTTAGG 215 0.0 37.674416 2 CATACGA 575 0.0 37.565216 18 TCGAGTA 30 1.1400999E-4 37.499996 42 TAGGGAT 1615 0.0 37.33746 5 GCGTTAG 115 0.0 37.173916 1 TAAGGGA 1665 0.0 37.162163 4 AGGGATC 1060 0.0 37.146225 6 ATAGGGA 1825 0.0 37.109592 4 CGTTGAT 370 0.0 37.094593 25 GTTGATC 765 0.0 37.058826 16 >>END_MODULE