##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547010_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3300270 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.625427313522835 31.0 31.0 33.0 30.0 34.0 2 32.01523208707167 31.0 31.0 34.0 30.0 34.0 3 32.11339375263236 33.0 31.0 34.0 30.0 34.0 4 35.79478800219376 37.0 35.0 37.0 35.0 37.0 5 35.74161780702791 37.0 35.0 37.0 33.0 37.0 6 35.789341781127 37.0 35.0 37.0 35.0 37.0 7 36.113049235365594 37.0 35.0 37.0 35.0 37.0 8 36.04355764831362 37.0 35.0 37.0 35.0 37.0 9 37.80389331781945 39.0 38.0 39.0 35.0 39.0 10 37.36633669366446 39.0 37.0 39.0 34.0 39.0 11 37.1023601099304 39.0 37.0 39.0 33.0 39.0 12 36.6230326609641 39.0 35.0 39.0 33.0 39.0 13 36.46060079932854 39.0 35.0 39.0 32.0 39.0 14 37.49476133770873 40.0 35.0 41.0 32.0 41.0 15 37.60511352101495 40.0 35.0 41.0 33.0 41.0 16 37.713992188517906 40.0 35.0 41.0 33.0 41.0 17 37.650802510097655 40.0 35.0 41.0 33.0 41.0 18 37.566225187636164 39.0 36.0 41.0 33.0 41.0 19 37.518849366869986 39.0 35.0 41.0 33.0 41.0 20 37.368734376278304 39.0 35.0 41.0 32.0 41.0 21 37.29141130877171 39.0 35.0 41.0 32.0 41.0 22 37.22015471461426 39.0 35.0 41.0 32.0 41.0 23 37.116591369797014 39.0 35.0 41.0 32.0 41.0 24 37.007828147394 39.0 35.0 41.0 32.0 41.0 25 36.87352731746191 38.0 35.0 41.0 31.0 41.0 26 36.72945516578947 38.0 35.0 41.0 31.0 41.0 27 36.62719535068343 38.0 35.0 41.0 31.0 41.0 28 36.67465783102595 38.0 35.0 41.0 31.0 41.0 29 36.65303747875174 38.0 35.0 41.0 31.0 41.0 30 36.56755447281586 38.0 35.0 41.0 31.0 41.0 31 36.43740027331097 38.0 35.0 41.0 31.0 41.0 32 36.350688883030784 38.0 35.0 41.0 30.0 41.0 33 36.21933841776582 38.0 35.0 41.0 30.0 41.0 34 36.02540761816457 38.0 35.0 41.0 30.0 41.0 35 35.90052026046354 38.0 35.0 41.0 29.0 41.0 36 35.79578640535471 38.0 35.0 41.0 29.0 41.0 37 35.720106839743416 38.0 35.0 41.0 29.0 41.0 38 35.59081711496332 38.0 35.0 40.0 29.0 41.0 39 35.49145645659294 38.0 35.0 40.0 28.0 41.0 40 35.308192057013514 37.0 35.0 40.0 27.0 41.0 41 35.20390543803992 37.0 34.0 40.0 27.0 41.0 42 35.119368718316984 37.0 34.0 40.0 27.0 41.0 43 34.98147394001097 37.0 34.0 40.0 26.0 41.0 44 34.82732382502038 37.0 34.0 40.0 26.0 41.0 45 34.71173358543392 36.0 34.0 40.0 26.0 41.0 46 34.641522057286224 36.0 34.0 40.0 26.0 41.0 47 34.561517391001345 36.0 34.0 40.0 25.0 41.0 48 34.46216006569159 36.0 34.0 40.0 25.0 41.0 49 34.38163907801483 36.0 34.0 40.0 25.0 41.0 50 34.25698261051369 35.0 34.0 40.0 24.0 41.0 51 33.89234274771458 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 2.0 11 6.0 12 4.0 13 19.0 14 35.0 15 110.0 16 271.0 17 670.0 18 1407.0 19 2698.0 20 4527.0 21 7288.0 22 11291.0 23 16401.0 24 24174.0 25 33561.0 26 43786.0 27 51039.0 28 56750.0 29 63530.0 30 73960.0 31 88837.0 32 109746.0 33 143472.0 34 251342.0 35 383137.0 36 262823.0 37 342399.0 38 482298.0 39 844032.0 40 652.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.75200513897348 23.930799601244747 27.510537016668334 13.806658243113443 2 32.44246682847161 26.396082744745126 27.613922497250226 13.547527929533038 3 30.21322497856236 25.896396355449706 29.953549255060953 13.936829410926984 4 26.03235492853615 29.05522881461214 29.193884136752445 15.718532120099265 5 23.913770691488878 32.38695621873362 28.64986804109967 15.049405048677835 6 22.808770191529785 40.83696182433558 25.514124601926508 10.840143382208122 7 87.31752250573437 3.6809109557702855 7.06639153766207 1.935175000833265 8 86.75878034221442 3.4482936244610287 6.773900317246771 3.0190257160777754 9 81.1776006205553 5.237056362055226 9.676693119047835 3.9086498983416504 10 46.6973308244477 24.632530065721895 15.118975114157326 13.551163995673082 11 37.16350480415239 25.155487278313593 21.113060446569524 16.567947470964498 12 32.25139155281235 20.903986643517044 26.758265232844586 20.086356570826023 13 25.12430801116272 27.436240065206785 28.51303075202938 18.926421171601113 14 21.655410011908117 28.818308805037162 29.963245431434398 19.563035751620323 15 20.535501640774847 22.822072133492107 37.20395603996037 19.43847018577268 16 23.73487623739876 20.571256291151936 34.748005466219425 20.945862005229877 17 23.969826711147878 21.169449772291358 27.885294233502105 26.97542928305866 18 24.91826426322695 21.800610253100505 30.631584688525482 22.649540795147065 19 28.714590018392432 24.80597042060195 24.780608859275148 21.698830701730465 20 30.089083620431055 24.002854311919933 24.502055892396683 21.40600617525233 21 27.631254412517762 25.17472812830465 26.179585306656726 21.014432152520854 22 26.728116184433393 22.49400806600672 25.318504243592194 25.45937150596769 23 24.931505604086937 26.25670020937681 24.91374948110306 23.89804470543319 24 24.168295321291893 23.553769843073447 30.13874622379381 22.139188611840847 25 25.027831056246914 23.198617082844734 28.22572092586364 23.547830935044708 26 22.710141897481115 26.582188730013 26.375296566644547 24.33237280586134 27 22.900096052747198 25.313686455956635 26.96330906259185 24.82290842870432 28 22.056680211013038 26.31099879706812 29.07089419956549 22.561426792353352 29 23.323667457511053 23.60415965966421 28.942692567577804 24.129480315246933 30 24.25868186542313 23.89971123574738 28.98596175464432 22.85564514418517 31 26.878922027591685 24.511691467667795 25.57475600481173 23.03463049992879 32 28.2250240131868 23.51092486372327 25.378347832147067 22.885703290942864 33 26.404566899071895 23.913770691488878 25.97654131328649 23.70512109615274 34 23.241825668808914 25.021043732785497 27.648040917864297 24.08908968054129 35 23.03375178394495 24.77115508731104 29.06671272350444 23.12838040523957 36 27.5695624903417 24.790668642262602 24.786578067855054 22.85319079954064 37 24.49117799452772 25.86988337317856 26.476167101479575 23.162771530814148 38 25.3784084332494 25.783193496289698 25.30111172722232 23.537286343238584 39 24.201383523166285 24.719432046468924 25.11921751856666 25.959966911798126 40 26.82159338478367 22.6499650028634 26.491741584779426 24.036700027573502 41 22.129128828853396 22.7257769818833 27.479236547312798 27.66585764195051 42 24.957412575334743 24.444575746832836 25.216664091119817 25.381347586712604 43 23.43493108139637 22.939759474224836 27.83854048305139 25.786768961327404 44 23.84989712962879 23.942404712341716 27.438785311504816 24.768912846524678 45 22.390137776606156 25.11055156093289 26.12168095337654 26.37762970908441 46 24.493389934762913 24.23853199889706 26.906677332460678 24.36140073387935 47 23.567344489996273 24.524357098055614 27.741063609947066 24.167234802001047 48 23.855139124980685 22.947001305953755 28.276231944659074 24.921627624406486 49 24.024973714271862 22.444799970911472 28.65338290503504 24.876843409781625 50 23.045387195593086 24.659921763976886 27.68973447627012 24.604956564159902 51 22.341050883715575 25.601026582673537 26.290939832195548 25.766982701415337 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2039.0 1 3411.5 2 4784.0 3 17991.0 4 31198.0 5 21542.0 6 11886.0 7 12084.0 8 12282.0 9 13190.0 10 14098.0 11 14774.5 12 15451.0 13 15177.0 14 14903.0 15 15085.5 16 15268.0 17 14894.0 18 14520.0 19 14126.5 20 13733.0 21 13954.5 22 14176.0 23 14239.0 24 14302.0 25 15291.5 26 17780.5 27 19280.0 28 21670.5 29 24061.0 30 28032.0 31 32003.0 32 37430.0 33 42857.0 34 51277.0 35 59697.0 36 63417.0 37 67137.0 38 75863.0 39 84589.0 40 103231.0 41 121873.0 42 144023.0 43 166173.0 44 175908.5 45 185644.0 46 207886.5 47 230129.0 48 245996.5 49 261864.0 50 256159.0 51 250454.0 52 237478.0 53 224502.0 54 212615.0 55 200728.0 56 193557.0 57 186386.0 58 185296.5 59 184207.0 60 179015.5 61 173824.0 62 163429.0 63 153034.0 64 139448.0 65 125862.0 66 109176.0 67 92490.0 68 80992.0 69 69494.0 70 60807.0 71 52120.0 72 44661.0 73 37202.0 74 31901.0 75 21719.5 76 16839.0 77 12736.0 78 8633.0 79 6247.5 80 3862.0 81 3107.5 82 2353.0 83 1533.5 84 714.0 85 582.5 86 451.0 87 315.5 88 180.0 89 106.5 90 33.0 91 41.5 92 50.0 93 30.5 94 11.0 95 12.0 96 13.0 97 6.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3300270.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.83117772423133 #Duplication Level Percentage of deduplicated Percentage of total 1 78.4096431563177 16.33365211882813 2 7.908861112574611 3.295017828646073 3 2.6196886359289104 1.6371359867155284 4 1.3429374887308587 1.1189987800114172 5 0.8737618455645317 0.9100744146803565 6 0.6163535080577447 0.7703621680382596 7 0.4864715703766071 0.7093643018210707 8 0.4092937836156037 0.6820857238335779 9 0.31610254960083045 0.5926309550835794 >10 4.2873927751039185 21.935533894741603 >50 2.003118404642556 30.530437772984854 >100 0.7193085927213173 19.263380846770918 >500 0.00426939012876897 0.5939113095747749 >1k 0.0026499662868221196 1.0487751195310415 >5k 0.0 0.0 >10k+ 1.4722034926789555E-4 0.5786387787388646 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18868 0.5717107994194415 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2120220466810291E-4 0.0 0.0 0.07069118587267102 0.0 2 1.2120220466810291E-4 0.0 0.0 0.24607077602741595 0.0 3 1.2120220466810291E-4 0.0 0.0 0.39021049792895734 0.0 4 1.2120220466810291E-4 0.0 0.0 0.6777021274016974 0.0 5 1.2120220466810291E-4 0.0 0.0 1.1240898471943204 0.0 6 1.2120220466810291E-4 0.0 0.0 2.011138482608999 0.0 7 1.2120220466810291E-4 0.0 0.0 2.4008641717192836 0.0 8 1.2120220466810291E-4 0.0 0.0 3.37748123638369 0.0 9 1.2120220466810291E-4 0.0 0.0 3.8708045099340356 0.0 10 1.2120220466810291E-4 0.0 0.0 4.61292560911683 0.0 11 1.2120220466810291E-4 0.0 0.0 5.2934153872258936 0.0 12 1.2120220466810291E-4 0.0 0.0 5.840976647365215 0.0 13 1.2120220466810291E-4 0.0 0.0 6.128407675735621 0.0 14 1.5150275583512864E-4 0.0 0.0 6.274910840628191 0.0 15 1.5150275583512864E-4 0.0 0.0 6.420080781269411 0.0 16 1.5150275583512864E-4 0.0 0.0 6.673363088474579 0.0 17 1.5150275583512864E-4 0.0 0.0 6.925524275286567 0.0 18 1.5150275583512864E-4 0.0 0.0 7.266859984183112 0.0 19 1.5150275583512864E-4 0.0 0.0 7.457177746063201 0.0 20 1.5150275583512864E-4 0.0 0.0 7.659009717386759 0.0 21 1.5150275583512864E-4 0.0 0.0 7.896232732473404 0.0 22 1.5150275583512864E-4 0.0 0.0 8.140546076533132 0.0 23 1.5150275583512864E-4 0.0 0.0 8.41970505443494 0.0 24 1.5150275583512864E-4 0.0 0.0 8.643383723149924 0.0 25 1.5150275583512864E-4 0.0 0.0 8.837882961091061 0.0 26 1.5150275583512864E-4 0.0 0.0 9.016141103606675 0.0 27 1.8180330700215438E-4 0.0 0.0 9.205761952809922 0.0 28 1.8180330700215438E-4 0.0 0.0 9.386292636663061 0.0 29 1.8180330700215438E-4 0.0 0.0 9.587882203577283 0.0 30 2.1210385816918009E-4 0.0 0.0 9.896069109497102 0.0 31 2.1210385816918009E-4 0.0 0.0 10.135534365370106 0.0 32 2.4240440933620582E-4 0.0 0.0 10.384695797616558 0.0 33 2.4240440933620582E-4 0.0 0.0 10.611465122550578 0.0 34 2.4240440933620582E-4 0.0 0.0 10.836931523784418 0.0 35 2.4240440933620582E-4 0.0 0.0 11.11339375263236 0.0 36 2.4240440933620582E-4 0.0 0.0 11.328285261508906 0.0 37 2.4240440933620582E-4 0.0 0.0 11.56084199171583 0.0 38 2.4240440933620582E-4 0.0 0.0 11.827395940332154 0.0 39 2.4240440933620582E-4 0.0 0.0 12.23393843534014 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 45 3.8562575E-10 45.0 1 TCGAATA 20 7.0352096E-4 45.0 18 CGTTTTT 10920 0.0 41.517853 1 AGGGTAC 1350 0.0 39.666668 6 TCGATAG 120 0.0 39.375004 1 CTAAGCG 80 0.0 39.375 1 ATAACGG 160 0.0 39.375 2 TATAGCG 215 0.0 38.720932 1 GTTGATC 1925 0.0 38.68831 16 TAGCATA 1870 0.0 38.262035 30 ACACGAC 2180 0.0 38.188072 26 AACACGT 2005 0.0 38.154613 41 CATATGC 1865 0.0 38.123325 33 GGGCGAT 7685 0.0 38.061157 7 CACGACC 2195 0.0 38.02961 27 TGGTCAA 2210 0.0 37.466064 14 AGACACG 2240 0.0 36.964283 24 ATAGGGC 1510 0.0 36.953644 4 GGTACCT 2190 0.0 36.88356 8 GCCAGTA 1985 0.0 36.838787 25 >>END_MODULE