SRR1547008_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547008_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1367150
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6765	0.49482500091431075	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACG	45	3.8562575E-10	45.0	1
CACTACG	20	7.0337567E-4	45.0	39
CGAATTA	25	3.891196E-5	45.0	33
CGCGTAA	20	7.0337567E-4	45.0	31
TACGTTC	25	3.891196E-5	45.0	39
CGTTTTT	4350	0.0	41.068966	1
TAGCATA	745	0.0	40.771812	30
GTTTACG	50	1.0822987E-9	40.5	1
GTATGCG	45	1.9286745E-8	40.0	1
CATATGC	760	0.0	39.967106	33
ATTAGCG	40	3.458863E-7	39.375	1
GCGATAC	75	0.0	39.0	9
ACAACGA	255	0.0	38.82353	13
AGGGCGA	1615	0.0	38.59133	6
AACACGT	380	0.0	38.486843	41
GGTACCT	900	0.0	38.250004	8
GTAGCAT	800	0.0	37.96875	29
AGGGTAC	575	0.0	37.95652	6
GGGCGAT	3040	0.0	37.894737	7
CGTAAGG	190	0.0	37.894737	2