##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547008_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1367150 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.609767033610066 31.0 31.0 33.0 30.0 34.0 2 31.98777237318509 31.0 31.0 34.0 30.0 34.0 3 32.09435833668581 33.0 31.0 34.0 30.0 34.0 4 35.77262846066635 37.0 35.0 37.0 35.0 37.0 5 35.726653988223674 37.0 35.0 37.0 33.0 37.0 6 35.77426983140109 37.0 35.0 37.0 33.0 37.0 7 36.10038035328969 37.0 35.0 37.0 35.0 37.0 8 36.022195808799324 37.0 35.0 37.0 35.0 37.0 9 37.78131075595216 39.0 38.0 39.0 35.0 39.0 10 37.34346706652525 39.0 37.0 39.0 34.0 39.0 11 37.06614343707713 39.0 37.0 39.0 33.0 39.0 12 36.53166953150715 39.0 35.0 39.0 33.0 39.0 13 36.34299893939948 39.0 35.0 39.0 32.0 39.0 14 37.40690048641334 40.0 35.0 41.0 32.0 41.0 15 37.552792305160374 40.0 35.0 41.0 33.0 41.0 16 37.641004278974506 40.0 35.0 41.0 33.0 41.0 17 37.59660242109498 40.0 35.0 41.0 33.0 41.0 18 37.508051055114656 39.0 35.0 41.0 33.0 41.0 19 37.44603006253886 39.0 35.0 41.0 33.0 41.0 20 37.304644698826024 39.0 35.0 41.0 32.0 41.0 21 37.21739750576016 39.0 35.0 41.0 32.0 41.0 22 37.130401931024394 39.0 35.0 41.0 32.0 41.0 23 37.064549610503605 39.0 35.0 41.0 32.0 41.0 24 36.93574004315547 39.0 35.0 41.0 32.0 41.0 25 36.818469078008995 38.0 35.0 41.0 31.0 41.0 26 36.656524887539774 38.0 35.0 41.0 31.0 41.0 27 36.548502358921844 38.0 35.0 41.0 31.0 41.0 28 36.59709761182021 38.0 35.0 41.0 31.0 41.0 29 36.589618549537356 38.0 35.0 41.0 31.0 41.0 30 36.50579599897597 38.0 35.0 41.0 31.0 41.0 31 36.355797096148926 38.0 35.0 41.0 31.0 41.0 32 36.26204586182935 38.0 35.0 41.0 30.0 41.0 33 36.11720732911531 38.0 35.0 41.0 30.0 41.0 34 35.9500128003511 38.0 35.0 41.0 30.0 41.0 35 35.83101634787697 38.0 35.0 41.0 29.0 41.0 36 35.70405441977837 38.0 35.0 41.0 29.0 41.0 37 35.60911823867169 38.0 35.0 41.0 29.0 41.0 38 35.49511246022748 38.0 35.0 40.0 28.0 41.0 39 35.38282997476502 38.0 35.0 40.0 27.0 41.0 40 35.208302673444756 37.0 34.0 40.0 27.0 41.0 41 35.11260724865596 37.0 34.0 40.0 26.0 41.0 42 35.02091357934389 37.0 34.0 40.0 26.0 41.0 43 34.88471857513806 37.0 34.0 40.0 26.0 41.0 44 34.740186519401675 36.0 34.0 40.0 26.0 41.0 45 34.620721208353146 36.0 34.0 40.0 25.0 41.0 46 34.55290202245547 36.0 34.0 40.0 25.0 41.0 47 34.48115568884175 36.0 34.0 40.0 25.0 41.0 48 34.37220787770179 35.0 34.0 40.0 24.0 41.0 49 34.2984756610467 36.0 34.0 40.0 24.0 41.0 50 34.16634897414329 35.0 34.0 40.0 24.0 41.0 51 33.78349047288154 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 0.0 11 1.0 12 3.0 13 6.0 14 21.0 15 37.0 16 113.0 17 291.0 18 622.0 19 1279.0 20 2115.0 21 3337.0 22 4944.0 23 7351.0 24 10593.0 25 14530.0 26 18732.0 27 22055.0 28 24334.0 29 27073.0 30 31417.0 31 37166.0 32 45168.0 33 59517.0 34 103880.0 35 168884.0 36 103823.0 37 134399.0 38 193645.0 39 351534.0 40 277.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.641809603920564 24.66649599531873 26.562703434151334 13.128990966609368 2 32.55465749917712 26.376184032476317 27.388582086822954 13.680576381523608 3 30.02560070219069 26.027063599458728 29.89196503675529 14.05537066159529 4 25.773762937497715 29.09000475441612 29.390118128954395 15.746114179131771 5 23.911202135830013 32.914457082251396 28.15821233953846 15.016128442380133 6 22.694437333138282 41.58022162893611 25.222031232856672 10.50330980506894 7 87.57905131112167 3.9474819880773873 6.661522144607394 1.8119445561935412 8 86.96229382291628 3.6619244413561054 6.415462824123177 2.9603189116044324 9 81.39604286288996 5.494568993892404 9.526313864608857 3.583074278608785 10 47.31638810664521 23.579782759755695 14.971363785978129 14.132465347620963 11 37.811213107559524 24.63723804995794 21.389020956003364 16.16252788647917 12 32.489704860476174 21.831108510404857 26.044033207767985 19.635153421350985 13 23.92129612697948 29.034560947957427 28.71923344183155 18.32490948323154 14 20.793841202501554 30.58062392568482 29.575979226858795 19.049555644954832 15 19.665581684526202 22.986870497019346 38.48195150495556 18.865596313498884 16 22.485243023808653 21.028489924295066 35.835643491935784 20.6506235599605 17 23.05650440697802 21.408623779395093 27.428153457923415 28.10671835570347 18 24.32161796437845 22.61522144607395 31.274256665325677 21.788903924221923 19 28.257762498628537 24.425410525545843 25.715247046776142 21.601579929049482 20 29.357714954467323 24.226237062502285 24.728303404893392 21.687744578137 21 26.281680868960976 26.487291079983912 26.842994550707676 20.38803350034744 22 25.497641078155286 23.190652086457227 26.062831437662293 25.248875397725197 23 23.975569615623744 26.388691804118057 25.061331967962552 24.57440661229565 24 23.93380389862122 23.66090041326848 31.68993892403906 20.715356764071245 25 23.776323007716783 23.78919650367553 29.125041143985662 23.309439344622024 26 21.56054566068098 27.504809274768675 26.83743554108913 24.097209523461217 27 22.272537761035732 26.49372782796328 27.560691950407783 23.673042460593205 28 20.877592071096807 26.836996671908715 30.67834546318985 21.60706579380463 29 22.233185824525474 24.796766997037633 29.78275975569616 23.187287422740738 30 24.112057930731815 26.009143107925247 28.174157919760084 21.704641041582857 31 27.151885308854183 26.267051896280584 24.30559923929342 22.275463555571807 32 28.391910178107743 25.288081044508647 24.2378670957832 22.082141681600408 33 26.748564532055735 26.175181947847715 24.26544270928574 22.81081081081081 34 22.680978678272318 26.740372307354715 25.999487985956186 24.57916102841678 35 22.565921808141024 27.57817357276085 27.119555279230518 22.736349339867605 36 27.999414841092786 26.6878542954321 23.605456606809785 21.707274256665325 37 23.49288666203416 29.384193395018837 25.030757415060528 22.09216252788648 38 23.40818491021468 29.641882748783964 23.98961342939692 22.960318911604432 39 23.293713198990602 28.205683355886336 24.339611600775335 24.16099184434773 40 25.428738616830632 25.240975752477784 25.753794389788975 23.57649124090261 41 21.354423435614233 24.895658852357094 26.543978349120433 27.20593936290824 42 23.951212376110888 25.8549537358739 25.165782832900558 25.028051055114652 43 23.36839410452401 24.30991478623414 27.447683136451744 24.87400797279011 44 22.578502724646164 25.935047361299052 26.92893976520499 24.557510148849797 45 22.057052993453535 27.24719306586695 25.657023735508172 25.038730205171344 46 24.338514427824308 26.051567128698387 26.372161064989214 23.237757378488098 47 23.35983615550598 25.857879530409978 26.994404417949752 23.787879896134296 48 23.40438137731778 24.958270855429177 28.35833668580624 23.279011081446804 49 23.79109827012398 23.802435723951284 28.096551219690596 24.30991478623414 50 22.394909117507222 26.663423911055844 27.258969388874664 23.682697582562266 51 21.827378122371357 27.493471820941373 26.002267490765462 24.676882565921808 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 930.0 1 1503.5 2 2077.0 3 6818.0 4 11559.0 5 8256.0 6 4953.0 7 5050.5 8 5148.0 9 5665.0 10 6182.0 11 6393.0 12 6604.0 13 6702.5 14 6801.0 15 6757.5 16 6714.0 17 6643.0 18 6572.0 19 6341.5 20 6111.0 21 6139.5 22 6168.0 23 6214.5 24 6261.0 25 6922.5 26 8508.0 27 9432.0 28 10566.0 29 11700.0 30 12645.0 31 13590.0 32 16704.5 33 19819.0 34 22126.0 35 24433.0 36 28326.5 37 32220.0 38 35632.5 39 39045.0 40 51326.0 41 63607.0 42 73999.5 43 84392.0 44 92301.5 45 100211.0 46 104021.0 47 107831.0 48 107378.0 49 106925.0 50 100044.5 51 93164.0 52 87035.0 53 80906.0 54 77463.5 55 74021.0 56 72778.0 57 71535.0 58 68922.0 59 66309.0 60 64428.0 61 62547.0 62 58933.0 63 55319.0 64 51235.5 65 47152.0 66 41459.5 67 35767.0 68 31531.0 69 27295.0 70 23246.5 71 19198.0 72 16529.0 73 13860.0 74 11654.0 75 7985.0 76 6522.0 77 5307.0 78 4092.0 79 2886.0 80 1680.0 81 1228.5 82 777.0 83 556.5 84 336.0 85 271.0 86 206.0 87 152.0 88 98.0 89 64.5 90 31.0 91 23.0 92 15.0 93 8.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1367150.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.617916667431523 #Duplication Level Percentage of deduplicated Percentage of total 1 78.63038916311709 19.357163679453272 2 6.432342509837592 3.1670174376711833 3 2.2233098387747448 1.6419976901051185 4 1.2827003810351014 1.2630964435841914 5 0.9191220661796031 1.1313435216203476 6 0.655332197854 0.9679748061752711 7 0.54562098959581 0.940243643770982 8 0.4431839809185047 0.8728213048473846 9 0.4034310184568016 0.8938468074083914 >10 7.000292199611606 44.726068705376655 >50 1.3993764621863587 21.37590354474525 >100 0.061011222379347356 2.3972606260194276 >500 0.002392596955958697 0.41650194597802925 >1k 0.0011962984779793485 0.35068035508102413 >5k 2.9907461949483713E-4 0.49807948816357933 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6765 0.49482500091431075 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0706579380463007 0.0 2 0.0 0.0 0.0 0.2264564970924917 0.0 3 0.0 0.0 0.0 0.3464872179351205 0.0 4 0.0 0.0 0.0 0.638847236952785 0.0 5 0.0 0.0 0.0 1.0366090041326848 0.0 6 0.0 0.0 0.0 1.8003145229126285 0.0 7 0.0 0.0 0.0 2.1182020992575796 0.0 8 0.0 0.0 0.0 3.070401931024394 0.0 9 0.0 0.0 0.0 3.4813297736166477 0.0 10 0.0 0.0 0.0 4.103280547123578 0.0 11 0.0 0.0 0.0 4.702629557839301 0.0 12 0.0 0.0 0.0 5.156274000658303 0.0 13 0.0 0.0 0.0 5.379658413487912 0.0 14 0.0 0.0 0.0 5.489009984273855 0.0 15 0.0 0.0 0.0 5.6097721537505025 0.0 16 0.0 0.0 0.0 5.847346670080094 0.0 17 0.0 0.0 0.0 6.091577368979263 0.0 18 0.0 0.0 0.0 6.418681198112862 0.0 19 0.0 0.0 0.0 6.583403430494093 0.0 20 0.0 0.0 0.0 6.768533079764474 0.0 21 0.0 0.0 0.0 6.998354240573455 0.0 22 0.0 0.0 0.0 7.220714625315437 0.0 23 0.0 0.0 0.0 7.4820612222506675 0.0 24 7.31448634019676E-5 0.0 0.0 7.688256592180814 0.0 25 7.31448634019676E-5 0.0 0.0 7.86914383937388 0.0 26 7.31448634019676E-5 0.0 0.0 8.03905935705665 0.0 27 7.31448634019676E-5 0.0 0.0 8.197564276048714 0.0 28 7.31448634019676E-5 0.0 0.0 8.370551877994368 0.0 29 7.31448634019676E-5 0.0 0.0 8.557290714259592 0.0 30 7.31448634019676E-5 0.0 0.0 8.78996452474125 0.0 31 7.31448634019676E-5 0.0 0.0 8.9925026515013 0.0 32 7.31448634019676E-5 0.0 0.0 9.178290604542296 0.0 33 7.31448634019676E-5 0.0 0.0 9.392312474856453 0.0 34 7.31448634019676E-5 0.0 0.0 9.59068134440259 0.0 35 7.31448634019676E-5 0.0 0.0 9.828841019639396 0.0 36 7.31448634019676E-5 0.0 0.0 10.029184800497385 0.0 37 1.462897268039352E-4 0.0 0.0 10.236623633105365 0.0 38 1.462897268039352E-4 0.0 0.0 10.474929598068975 0.0 39 1.462897268039352E-4 0.0 0.0 10.768240500310865 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 45 3.8562575E-10 45.0 1 CACTACG 20 7.0337567E-4 45.0 39 CGAATTA 25 3.891196E-5 45.0 33 CGCGTAA 20 7.0337567E-4 45.0 31 TACGTTC 25 3.891196E-5 45.0 39 CGTTTTT 4350 0.0 41.068966 1 TAGCATA 745 0.0 40.771812 30 GTTTACG 50 1.0822987E-9 40.5 1 GTATGCG 45 1.9286745E-8 40.0 1 CATATGC 760 0.0 39.967106 33 ATTAGCG 40 3.458863E-7 39.375 1 GCGATAC 75 0.0 39.0 9 ACAACGA 255 0.0 38.82353 13 AGGGCGA 1615 0.0 38.59133 6 AACACGT 380 0.0 38.486843 41 GGTACCT 900 0.0 38.250004 8 GTAGCAT 800 0.0 37.96875 29 AGGGTAC 575 0.0 37.95652 6 GGGCGAT 3040 0.0 37.894737 7 CGTAAGG 190 0.0 37.894737 2 >>END_MODULE