##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547007_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3247678 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.612868948214693 31.0 31.0 33.0 30.0 34.0 2 31.99657047281165 31.0 31.0 34.0 30.0 34.0 3 32.08444310057832 33.0 31.0 34.0 30.0 34.0 4 35.76306949149515 37.0 35.0 37.0 35.0 37.0 5 35.7086444530523 37.0 35.0 37.0 33.0 37.0 6 35.76230001865949 37.0 35.0 37.0 33.0 37.0 7 36.10549721985985 37.0 35.0 37.0 35.0 37.0 8 36.03250322230221 37.0 35.0 37.0 35.0 37.0 9 37.79311957650974 39.0 38.0 39.0 35.0 39.0 10 37.33586088275993 39.0 37.0 39.0 34.0 39.0 11 37.07937917490589 39.0 37.0 39.0 33.0 39.0 12 36.62818358223937 39.0 35.0 39.0 33.0 39.0 13 36.49039067296696 39.0 35.0 39.0 32.0 39.0 14 37.52382871700951 40.0 35.0 41.0 32.0 41.0 15 37.634456987423015 40.0 35.0 41.0 33.0 41.0 16 37.71980381059945 40.0 35.0 41.0 33.0 41.0 17 37.672848416622585 40.0 35.0 41.0 33.0 41.0 18 37.58111118158882 39.0 36.0 41.0 33.0 41.0 19 37.5101915891908 39.0 35.0 41.0 33.0 41.0 20 37.38159694403201 39.0 35.0 41.0 32.0 41.0 21 37.31195518767563 39.0 35.0 41.0 32.0 41.0 22 37.236548081429255 39.0 35.0 41.0 32.0 41.0 23 37.1469653087529 39.0 35.0 41.0 32.0 41.0 24 37.042114088896746 39.0 35.0 41.0 32.0 41.0 25 36.92180413205989 39.0 35.0 41.0 32.0 41.0 26 36.762646419996074 38.0 35.0 41.0 31.0 41.0 27 36.64852827158357 38.0 35.0 41.0 31.0 41.0 28 36.695598208935735 38.0 35.0 41.0 31.0 41.0 29 36.68025894192712 38.0 35.0 41.0 31.0 41.0 30 36.580891332207194 38.0 35.0 41.0 31.0 41.0 31 36.46326359940856 38.0 35.0 41.0 31.0 41.0 32 36.3594759086338 38.0 35.0 41.0 30.0 41.0 33 36.22558886687658 38.0 35.0 41.0 30.0 41.0 34 36.05225887541807 38.0 35.0 41.0 30.0 41.0 35 35.92557082321585 38.0 35.0 41.0 30.0 41.0 36 35.83782474740415 38.0 35.0 41.0 29.0 41.0 37 35.7511191072514 38.0 35.0 41.0 29.0 41.0 38 35.64262528489586 38.0 35.0 41.0 29.0 41.0 39 35.525840000147795 38.0 35.0 40.0 28.0 41.0 40 35.374956507387736 38.0 35.0 40.0 27.0 41.0 41 35.3016586003908 38.0 35.0 40.0 27.0 41.0 42 35.20814409556613 37.0 34.0 40.0 27.0 41.0 43 35.083320452335485 37.0 34.0 40.0 26.0 41.0 44 34.865716983026026 37.0 34.0 40.0 26.0 41.0 45 34.784017381033465 37.0 34.0 40.0 25.0 41.0 46 34.74828015585289 37.0 34.0 40.0 25.0 41.0 47 34.685965480567965 36.0 34.0 40.0 25.0 41.0 48 34.58915600622968 36.0 34.0 40.0 25.0 41.0 49 34.51418983039575 36.0 34.0 40.0 25.0 41.0 50 34.40642237315399 36.0 34.0 40.0 24.0 41.0 51 34.029215334771486 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 8.0 12 6.0 13 13.0 14 32.0 15 99.0 16 258.0 17 657.0 18 1371.0 19 2645.0 20 4516.0 21 7271.0 22 11078.0 23 16240.0 24 24310.0 25 33932.0 26 43294.0 27 50587.0 28 55036.0 29 62756.0 30 73313.0 31 86989.0 32 107393.0 33 140012.0 34 238932.0 35 374792.0 36 249169.0 37 322558.0 38 467419.0 39 872319.0 40 671.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.200712016400644 24.465387270536056 27.93780664216095 13.396094070902349 2 32.61579503879387 26.028873552119393 27.775506069259333 13.579825339827408 3 30.350761374742202 25.487502147688286 30.118595501154978 14.043140976414534 4 26.038511207083953 29.133891968354003 29.05928481826092 15.768312006301116 5 23.99748374069104 32.38224355986031 28.257665938556713 15.362606760891936 6 22.336142930425986 41.63574713995661 25.504529697833345 10.523580231784061 7 86.69917399446621 3.9127955419225673 7.433834265589138 1.9541961980220945 8 86.07660611673941 3.5569720889817282 6.956139124629966 3.4102826696489 9 80.31781475872916 5.396871241545497 10.168957636810052 4.116356362915289 10 45.28084372896574 24.544859434956297 15.761537935718998 14.412758900358963 11 35.376444339617414 25.35220548342539 22.970596222901406 16.300753954055793 12 31.17824488757814 21.686294022991195 27.474614170493506 19.66084691893716 13 24.221028069901017 27.570313313080913 29.864968140314403 18.343690476703664 14 21.053472665701463 29.50076947283567 30.61448825899612 18.831269602466747 15 20.053465891630882 23.859723778034645 37.581804600086585 18.505005730247888 16 23.06244646174898 21.60137181087534 35.56590277730736 19.770278950068327 17 22.71946295168425 22.778489739438452 28.136533240056433 26.36551406882086 18 24.26952425702302 23.24716305003144 31.048552227160453 21.434760465785093 19 27.320473273520342 25.657438945609755 26.330843143932377 20.69124463693753 20 28.54291589252383 25.02378622511222 25.13913017238778 21.294167709976175 21 25.89567069149097 26.722138093739588 27.83952103626037 19.542670178509074 22 25.429429888061563 23.270995461988534 26.87477022044673 24.424804429503173 23 23.576875540001193 26.983247723450415 25.689184703655965 23.750692032892424 24 23.243776014740376 24.759166395190658 31.286876346731418 20.710181243337548 25 23.95240538009002 24.33643359963642 28.835832862740702 22.87532815753286 26 21.19535865316697 27.319364789243267 27.407981948949374 24.07729460864039 27 21.998640259286788 26.399569169110976 28.098198158807612 23.503592412794617 28 20.930738823245406 27.142253634750734 30.097719047270083 21.829288494733774 29 22.18135541762453 25.021784795167502 29.41178281837054 23.385076968837428 30 24.150516153387127 26.011630463364906 28.691083290892756 21.146770092355215 31 26.513773840879544 25.504991566282126 25.94598356117817 22.03525103166016 32 28.453929238058702 25.36267450159776 25.532580508289303 20.650815752054235 33 26.576064499005135 24.596527118759926 26.756624271248562 22.07078411098637 34 23.758359049142186 26.02597917650703 28.249937339847115 21.965724434503667 35 22.312649221997994 25.730598907896656 29.376372903963997 22.58037896614135 36 27.56606412335213 25.65180415053463 26.232680702951463 20.54945102316178 37 23.938426161706918 26.389685184307066 28.101554402868757 21.57033425111726 38 24.845751333722124 26.685434947676463 26.738980896505133 21.729832822096277 39 23.73794446370607 25.61319194821654 26.94001683664452 23.70884675143287 40 25.224206340653232 23.546361431151734 27.655389481346365 23.574042746848672 41 21.210754268126337 23.581956092937787 28.526812079276333 26.68047755965955 42 23.735419582852735 24.927409675466595 27.313883950317734 24.023286791362935 43 22.822521198222237 23.66715542612291 29.05983906039946 24.45048431525539 44 23.240512144368992 25.097315682158143 27.44970406548925 24.21246810798361 45 22.043349125128785 25.782235800470367 27.100716265590368 25.07369880881048 46 24.078895752596164 25.070127026139904 27.68100778463875 23.16996943662518 47 22.924840455242176 24.722617205277125 29.107811796612843 23.24473054286786 48 23.164180685400463 23.872871633209943 29.826417520456154 23.13653016093344 49 23.85476639001773 22.569263332140686 29.61851513604489 23.957455141796693 50 22.794932256215056 24.682834936222125 28.483642774930274 24.038590032632545 51 21.880986969767324 25.730814446506088 27.228838573282204 25.159360010444388 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2420.0 1 3885.5 2 5351.0 3 17270.5 4 29190.0 5 20557.5 6 11925.0 7 12527.5 8 13130.0 9 14000.0 10 14870.0 11 15335.0 12 15800.0 13 16200.5 14 16601.0 15 16463.5 16 16326.0 17 16224.0 18 16122.0 19 16150.5 20 16179.0 21 16215.0 22 16251.0 23 16918.0 24 17585.0 25 17906.5 26 21052.0 27 23876.0 28 26999.5 29 30123.0 30 33714.5 31 37306.0 32 43554.5 33 49803.0 34 55714.0 35 61625.0 36 69321.5 37 77018.0 38 85584.5 39 94151.0 40 117791.0 41 141431.0 42 165249.5 43 189068.0 44 221823.5 45 254579.0 46 266000.0 47 277421.0 48 269705.0 49 261989.0 50 243106.5 51 224224.0 52 213340.5 53 202457.0 54 191887.0 55 181317.0 56 173301.5 57 165286.0 58 158969.5 59 152653.0 60 148395.0 61 144137.0 62 133839.5 63 123542.0 64 111836.5 65 100131.0 66 88658.5 67 77186.0 68 65434.5 69 53683.0 70 46046.5 71 38410.0 72 34191.0 73 29972.0 74 24987.0 75 16581.0 76 13160.0 77 10045.5 78 6931.0 79 5097.0 80 3263.0 81 2415.5 82 1568.0 83 1201.0 84 834.0 85 555.0 86 276.0 87 220.0 88 164.0 89 111.5 90 59.0 91 44.5 92 30.0 93 23.0 94 16.0 95 10.0 96 4.0 97 4.0 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3247678.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.10923360034953 #Duplication Level Percentage of deduplicated Percentage of total 1 78.37019478121805 16.543347489416256 2 8.181602800780388 3.4541472949389433 3 2.8150610015487327 1.7827134084277834 4 1.396238143183803 1.1789406850474071 5 0.8760883177349087 0.9246776476801715 6 0.6400286936802967 0.8106309123494362 7 0.47167946480369666 0.6969754404920353 8 0.3799457541982036 0.6416290944664691 9 0.3138177139641104 0.5962006288796469 >10 3.860039102808319 20.006919787326442 >50 1.8881349473539648 29.22391288431253 >100 0.8007945698353616 21.89867406125439 >500 0.0032614789670570086 0.47041497057192716 >1k 0.002964980879142735 1.2365291865492654 >5k 0.0 0.0 >10k+ 1.4824904395713674E-4 0.534286508287288 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17073 0.5256986684024709 No Hit GAGCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCT 3642 0.1121416593640133 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.158245983745926E-5 0.0 0.0 0.09668446194481103 0.0 2 6.158245983745926E-5 0.0 0.0 0.33488541659610344 0.0 3 6.158245983745926E-5 0.0 0.0 0.5189553890502692 0.0 4 6.158245983745926E-5 0.0 0.0 0.9479080130480916 0.0 5 6.158245983745926E-5 0.0 0.0 1.5555113530343834 0.0 6 6.158245983745926E-5 0.0 0.0 2.6055538757229013 0.0 7 6.158245983745926E-5 0.0 0.0 3.059816890713919 0.0 8 6.158245983745926E-5 0.0 0.0 4.216581816300754 0.0 9 6.158245983745926E-5 0.0 0.0 4.764634917624223 0.0 10 6.158245983745926E-5 0.0 0.0 5.610931871940506 0.0 11 6.158245983745926E-5 0.0 0.0 6.420310141584234 0.0 12 6.158245983745926E-5 0.0 0.0 7.0465113844414375 0.0 13 6.158245983745926E-5 0.0 0.0 7.362183073568254 0.0 14 6.158245983745926E-5 0.0 0.0 7.507517678784658 0.0 15 9.237368975618888E-5 0.0 0.0 7.66236677404595 0.0 16 1.5395614959364814E-4 0.0 0.0 7.959378977842015 0.0 17 1.5395614959364814E-4 0.0 0.0 8.264458483876789 0.0 18 1.5395614959364814E-4 0.0 0.0 8.667084606294097 0.0 19 1.5395614959364814E-4 0.0 0.0 8.876803673270564 0.0 20 1.5395614959364814E-4 0.0 0.0 9.103519499162172 0.0 21 1.5395614959364814E-4 0.0 0.0 9.383750482652529 0.0 22 1.5395614959364814E-4 0.0 0.0 9.670416833195901 0.0 23 1.5395614959364814E-4 0.0 0.0 9.98140825537507 0.0 24 1.5395614959364814E-4 0.0 0.0 10.23571302327386 0.0 25 1.5395614959364814E-4 0.0 0.0 10.443584616455203 0.0 26 1.5395614959364814E-4 0.0 0.0 10.642742291569546 0.0 27 1.5395614959364814E-4 0.0 0.0 10.858280901000654 0.0 28 1.5395614959364814E-4 0.0 0.0 11.064027899317605 0.0 29 1.5395614959364814E-4 0.0 0.0 11.298133620389706 0.0 30 1.5395614959364814E-4 0.0 0.0 11.600626663111306 0.0 31 1.5395614959364814E-4 0.0 0.0 11.838889200222436 0.0 32 1.5395614959364814E-4 0.0 0.0 12.081062223533245 0.0 33 1.5395614959364814E-4 0.0 0.0 12.325606171547795 0.0 34 1.5395614959364814E-4 0.0 0.0 12.576062035706743 0.0 35 1.5395614959364814E-4 0.0 0.0 12.867285488278087 0.0 36 1.5395614959364814E-4 0.0 0.0 13.11198339244223 0.0 37 1.5395614959364814E-4 0.0 0.0 13.361084442484755 0.0 38 1.5395614959364814E-4 0.0 0.0 13.652800554734798 0.0 39 1.5395614959364814E-4 0.0 0.0 14.059768240570648 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 10640 0.0 40.43233 1 CGTTAGG 475 0.0 39.789474 2 TAGGGCG 1735 0.0 38.51585 5 AGGGCGA 4295 0.0 38.45169 6 ACAACGA 545 0.0 38.394493 13 CGTAAGG 450 0.0 37.5 2 GTTGATC 1940 0.0 37.345364 16 GGGCGAT 7875 0.0 37.314285 7 TCGTTAG 170 0.0 37.058823 1 AGGGTAC 1360 0.0 37.058823 6 ACGGGTA 250 0.0 36.9 5 ACGGGAT 665 0.0 36.8797 5 TATACGG 355 0.0 36.126762 2 GCCAGTA 1955 0.0 36.023014 25 CGGTCTA 225 0.0 36.0 31 TAGCATA 1930 0.0 35.906734 30 GCGTAAG 245 0.0 35.816326 1 GCCGATG 495 0.0 35.454544 9 TCACGAC 235 0.0 35.425533 25 CATATGC 1980 0.0 35.340908 33 >>END_MODULE