##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547006_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1727939 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.609147660883863 31.0 31.0 33.0 30.0 34.0 2 31.99580598620669 31.0 31.0 34.0 30.0 34.0 3 32.0956648353906 33.0 31.0 34.0 30.0 34.0 4 35.77817561846801 37.0 35.0 37.0 35.0 37.0 5 35.721124993417014 37.0 35.0 37.0 33.0 37.0 6 35.77344975719629 37.0 35.0 37.0 33.0 37.0 7 36.09699069237976 37.0 35.0 37.0 35.0 37.0 8 36.0273470301903 37.0 35.0 37.0 35.0 37.0 9 37.78947347099637 39.0 38.0 39.0 35.0 39.0 10 37.35516010692507 39.0 37.0 39.0 34.0 39.0 11 37.06605673001188 39.0 37.0 39.0 33.0 39.0 12 36.50537316421471 39.0 35.0 39.0 33.0 39.0 13 36.31242943182601 39.0 35.0 39.0 32.0 39.0 14 37.31452904298126 40.0 35.0 41.0 32.0 41.0 15 37.472701293274824 40.0 35.0 41.0 32.0 41.0 16 37.58171555824598 40.0 35.0 41.0 33.0 41.0 17 37.53924588773099 39.0 35.0 41.0 33.0 41.0 18 37.44845159464541 39.0 35.0 41.0 33.0 41.0 19 37.37530954507075 39.0 35.0 41.0 32.0 41.0 20 37.22179486660119 39.0 35.0 41.0 32.0 41.0 21 37.15508822938773 39.0 35.0 41.0 32.0 41.0 22 37.072559853096664 39.0 35.0 41.0 32.0 41.0 23 36.976824992085945 39.0 35.0 41.0 32.0 41.0 24 36.86857174934995 38.0 35.0 41.0 32.0 41.0 25 36.71961162980869 38.0 35.0 41.0 31.0 41.0 26 36.55197608248902 38.0 35.0 41.0 31.0 41.0 27 36.440296792884475 38.0 35.0 41.0 31.0 41.0 28 36.4602205286182 38.0 35.0 41.0 31.0 41.0 29 36.450067971149444 38.0 35.0 41.0 31.0 41.0 30 36.35704096035798 38.0 35.0 40.0 31.0 41.0 31 36.21448152972993 38.0 35.0 40.0 30.0 41.0 32 36.088275685657884 38.0 35.0 41.0 30.0 41.0 33 35.95701700117886 38.0 35.0 41.0 30.0 41.0 34 35.743052850824014 38.0 35.0 41.0 29.0 41.0 35 35.599665265961356 38.0 35.0 41.0 29.0 41.0 36 35.45395989094522 38.0 35.0 40.0 28.0 41.0 37 35.34813902574107 38.0 34.0 40.0 27.0 41.0 38 35.23520448349161 37.0 34.0 40.0 27.0 41.0 39 35.10912422255647 37.0 34.0 40.0 27.0 41.0 40 34.933256324442006 37.0 34.0 40.0 26.0 41.0 41 34.84638635970367 37.0 34.0 40.0 26.0 41.0 42 34.72384499684306 36.0 34.0 40.0 25.0 41.0 43 34.584662421532244 36.0 34.0 40.0 25.0 41.0 44 34.410239018854256 36.0 34.0 40.0 24.0 41.0 45 34.28519351666928 35.0 34.0 40.0 24.0 41.0 46 34.22972107232952 35.0 34.0 40.0 24.0 41.0 47 34.13485140389794 35.0 33.0 40.0 23.0 41.0 48 34.00316388483621 35.0 33.0 40.0 23.0 41.0 49 33.91141006713779 35.0 33.0 39.0 24.0 41.0 50 33.78915864506791 35.0 33.0 39.0 24.0 41.0 51 33.437047256876546 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 5.0 12 1.0 13 10.0 14 28.0 15 51.0 16 141.0 17 335.0 18 819.0 19 1642.0 20 2743.0 21 4369.0 22 6541.0 23 9475.0 24 13693.0 25 19088.0 26 24924.0 27 29000.0 28 32342.0 29 36138.0 30 41465.0 31 49482.0 32 60529.0 33 79049.0 34 138358.0 35 213076.0 36 135312.0 37 178388.0 38 250797.0 39 399847.0 40 289.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.48541875610192 24.123189533889796 27.488412496042976 13.902979213965308 2 32.40982465237488 26.25092668201829 27.831885269098038 13.50736339650879 3 30.22369423920636 25.547661115351872 30.298291779976026 13.930352865465737 4 26.380908122335338 28.50847165322387 29.78722049794582 15.323399726494975 5 23.779369526354806 32.66428965374356 28.80211627841029 14.754224541491338 6 22.883793930225547 41.24080769054926 25.010200012847676 10.865198366377516 7 87.33520106901922 3.891456816473267 6.96205132241358 1.811290792093934 8 87.02020152331767 3.5259925263565437 6.658452642136094 2.7953533081896986 9 81.58875978839531 5.158920540597787 9.362425409693282 3.8898942613136227 10 49.06093328526065 22.86099219937741 14.769907965501098 13.308166549860845 11 39.23234558627359 23.531907086997865 21.097156786205996 16.138590540522554 12 33.235374628386765 19.86754162039285 26.955696931431028 19.941386819789354 13 25.3997970993189 26.741800491799765 28.87694530883324 18.98145710004809 14 21.413429525000595 28.7734115614035 30.32624415560966 19.48691475798625 15 20.567566331913337 21.239522922973553 38.346839790062035 19.846070955051076 16 24.221225402054124 18.836949683987687 35.475673620422945 21.466151293535248 17 24.1565240439622 19.905332306290905 27.782983079842516 28.155160569904375 18 25.880658981595992 21.077885272570384 30.39748509640676 22.643970649426862 19 28.597710914563535 23.37970263996588 25.41964733708771 22.602939108382877 20 29.849433342264973 23.40481926734682 24.755966501132274 21.98978088925593 21 27.27584712191808 24.555207099324686 27.172776353794898 20.99616942496234 22 26.854709570187374 21.26573912620758 26.19901512727012 25.68053617633493 23 24.93791736861081 24.55740625103085 25.25332202120561 25.25135435915272 24 25.19053045275325 22.645185970106585 30.56068530196957 21.603598275170594 25 25.236828383409364 22.21936075289695 28.495450360226837 24.04836050346685 26 22.381345637780036 25.910289657215905 26.755458381343324 24.95290632366073 27 23.48867639424771 24.35942472506263 27.40750686222141 24.744392018468243 28 22.4381184752471 24.823792969543483 30.051813171645524 22.686275383563885 29 23.5949301451035 23.204233482779195 29.622515609636686 23.57832076248062 30 25.670466376417224 23.541108800715765 29.00258631815128 21.785838504715734 31 29.02440421797297 23.11221634560016 25.172647877037324 22.690731559389537 32 29.693640805607142 23.24098246523749 25.066046891701614 21.99932983745375 33 29.464408176446042 23.123675083437554 24.349586414798207 23.062330325318197 34 25.249733931579758 24.15264659226975 27.609828819188643 22.98779065696185 35 25.143422308310655 24.221688381360686 27.91487430979913 22.720015000529532 36 29.437150269772257 23.451117198002937 25.52729002586318 21.584442506361626 37 25.396787733826255 25.974875270481192 26.25451477164414 22.373822224048418 38 26.56864623114589 24.991738712998547 25.87510322991726 22.5645118259383 39 25.156906580614248 24.6307884711208 25.331854886081047 24.880450062183908 40 27.034171923893147 22.57967439822818 26.12557503476685 24.26057864311182 41 23.106429104268148 21.70134478126832 26.81246270846367 28.379763405999864 42 25.413686478515736 23.488502777007753 25.44447460240205 25.653336142074462 43 24.260925877591745 22.681529845671637 27.64854546369982 25.408998813036803 44 23.898470952967667 23.928622480307464 27.260047953081678 24.91285861364319 45 23.076740556234913 25.214605376694433 26.258913075056466 25.449740992014185 46 25.52989428446259 23.77074653677011 26.919642417932575 23.77971676083473 47 24.226028812359697 23.70841794762431 27.852082741346774 24.213470498669224 48 24.512092151401177 22.757342707121026 28.923301111902678 23.80726402957512 49 24.85666450030933 21.782829139223086 28.251113031189178 25.109393329278408 50 23.848932167165625 24.162890009427414 27.688998280610598 24.29917954279636 51 23.148155114271972 25.68192511425461 26.06857070764651 25.101349063826905 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1044.0 1 1846.5 2 2649.0 3 9338.5 4 16028.0 5 11189.5 6 6351.0 7 6523.5 8 6696.0 9 7263.5 10 7831.0 11 8097.0 12 8363.0 13 8190.5 14 8018.0 15 8098.0 16 8178.0 17 8046.0 18 7914.0 19 7764.5 20 7615.0 21 7413.0 22 7211.0 23 7597.5 24 7984.0 25 7984.0 26 8775.5 27 9567.0 28 10098.5 29 10630.0 30 12904.5 31 15179.0 32 17403.5 33 19628.0 34 23230.5 35 26833.0 36 28162.5 37 29492.0 38 35207.0 39 40922.0 40 52121.0 41 63320.0 42 75156.0 43 86992.0 44 92435.5 45 97879.0 46 106520.5 47 115162.0 48 120546.5 49 125931.0 50 125964.5 51 125998.0 52 120098.0 53 114198.0 54 109181.5 55 104165.0 56 103533.0 57 102901.0 58 102043.5 59 101186.0 60 98193.0 61 95200.0 62 90411.5 63 85623.0 64 77481.5 65 69340.0 66 62201.0 67 55062.0 68 47542.0 69 40022.0 70 35882.5 71 31743.0 72 27509.0 73 23275.0 74 18952.5 75 11674.5 76 8719.0 77 7263.0 78 5807.0 79 4092.0 80 2377.0 81 1830.5 82 1284.0 83 946.0 84 608.0 85 403.5 86 199.0 87 135.5 88 72.0 89 72.0 90 72.0 91 53.0 92 34.0 93 20.5 94 7.0 95 9.5 96 12.0 97 7.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1727939.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.590532954992188 #Duplication Level Percentage of deduplicated Percentage of total 1 78.42477989307193 18.50082354555522 2 6.671404823721885 3.1476399070021 3 2.3517259830551334 1.6643540791312055 4 1.3157988074309355 1.241615805153556 5 0.9398834385443483 1.1086175615415912 6 0.6602894220193839 0.9345947621988612 7 0.5436860586876594 0.8978090719248732 8 0.4444996440040488 0.8388786800287849 9 0.37505808050194356 0.7963038007305492 >10 6.346142815368967 39.05251534657763 >50 1.8489849637906546 27.83924932019623 >100 0.07279409091927151 2.479968014053214 >500 0.0034663852187434984 0.5737605511043796 >1k 0.0012379947209798208 0.3746411661186492 >5k 2.4759894419596417E-4 0.5492283886831398 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9403 0.5441743024493341 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2017 0.11672865766673476 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.787241332014614E-5 0.0 0.0 0.06661114773148821 0.0 2 5.787241332014614E-5 0.0 0.0 0.21829474304359123 0.0 3 5.787241332014614E-5 0.0 0.0 0.31465231122163456 0.0 4 5.787241332014614E-5 0.0 0.0 0.5279121543063731 0.0 5 5.787241332014614E-5 0.0 0.0 0.8289065759844532 0.0 6 5.787241332014614E-5 0.0 0.0 1.4616256708136108 0.0 7 5.787241332014614E-5 0.0 0.0 1.7360566547777438 0.0 8 5.787241332014614E-5 0.0 0.0 2.512704441534105 0.0 9 5.787241332014614E-5 0.0 0.0 2.9264343243598296 0.0 10 5.787241332014614E-5 0.0 0.0 3.580161105224201 0.0 11 5.787241332014614E-5 0.0 0.0 4.190020596791901 0.0 12 5.787241332014614E-5 0.0 0.0 4.663764172230617 0.0 13 5.787241332014614E-5 0.0 0.0 4.923148328731512 0.0 14 5.787241332014614E-5 0.0 0.0 5.048731465636229 0.0 15 5.787241332014614E-5 0.0 0.0 5.178307799060036 0.0 16 5.787241332014614E-5 0.0 0.0 5.409739579927301 0.0 17 5.787241332014614E-5 0.0 0.0 5.645974771100137 0.0 18 5.787241332014614E-5 0.0 0.0 5.960627082321772 0.0 19 5.787241332014614E-5 0.0 0.0 6.12238047755158 0.0 20 5.787241332014614E-5 0.0 0.0 6.311623269108458 0.0 21 5.787241332014614E-5 0.0 0.0 6.5218158742872285 0.0 22 5.787241332014614E-5 0.0 0.0 6.731661244986078 0.0 23 5.787241332014614E-5 0.0 0.0 6.964539836186347 0.0 24 5.787241332014614E-5 0.0 0.0 7.157833696675635 0.0 25 5.787241332014614E-5 0.0 0.0 7.316751343652756 0.0 26 5.787241332014614E-5 0.0 0.0 7.473411966510392 0.0 27 5.787241332014614E-5 0.0 0.0 7.641473454792096 0.0 28 5.787241332014614E-5 0.0 0.0 7.799985994875977 0.0 29 5.787241332014614E-5 0.0 0.0 7.981473883047955 0.0 30 5.787241332014614E-5 0.0 0.0 8.258740615264776 0.0 31 1.1574482664029228E-4 0.0 0.0 8.461525551538568 0.0 32 1.1574482664029228E-4 0.0 0.0 8.650594725855484 0.0 33 1.1574482664029228E-4 0.0 0.0 8.844177948411373 0.0 34 1.1574482664029228E-4 0.0 0.0 9.047252246751766 0.0 35 1.1574482664029228E-4 0.0 0.0 9.28626531376397 0.0 36 1.1574482664029228E-4 0.0 0.0 9.479211939773338 0.0 37 1.1574482664029228E-4 0.0 0.0 9.687321138072582 0.0 38 1.1574482664029228E-4 0.0 0.0 9.929980167123956 0.0 39 1.1574482664029228E-4 0.0 0.0 10.314368736396366 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 25 3.8916234E-5 45.0 1 CGTTTTT 5835 0.0 41.413883 1 ATTTACG 60 3.6379788E-12 41.249996 1 GCATATC 330 0.0 38.86364 28 TTCGACG 325 0.0 38.76923 25 TGCGATA 35 6.2501167E-6 38.571426 12 TCGTACA 35 6.2501167E-6 38.571426 34 ATATGCT 1305 0.0 38.448273 34 AGGGTAC 960 0.0 38.437496 6 AGGGCGA 2185 0.0 38.40961 6 CATATGC 1335 0.0 38.258427 33 ATGACGG 195 0.0 38.076923 2 GGGCGAT 4290 0.0 37.86713 7 TTGATCC 1385 0.0 37.851986 17 TAGCATA 1355 0.0 37.52767 30 GCTACGA 90 0.0 37.5 10 GTATACG 30 1.1401597E-4 37.499996 1 TAATGCG 30 1.1401597E-4 37.499996 1 CATACGA 260 0.0 37.21154 18 AGCATAT 1370 0.0 37.11679 31 >>END_MODULE