##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547005_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2077815 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.615438333056602 31.0 31.0 33.0 30.0 34.0 2 32.005988983619815 31.0 31.0 34.0 30.0 34.0 3 32.09600084704365 33.0 31.0 34.0 30.0 34.0 4 35.79517810777187 37.0 35.0 37.0 35.0 37.0 5 35.7501380055491 37.0 35.0 37.0 33.0 37.0 6 35.80470253607756 37.0 35.0 37.0 35.0 37.0 7 36.11247777112014 37.0 35.0 37.0 35.0 37.0 8 36.044443321469906 37.0 35.0 37.0 35.0 37.0 9 37.81060633405765 39.0 38.0 39.0 35.0 39.0 10 37.34207665263751 39.0 37.0 39.0 34.0 39.0 11 37.09503540979346 39.0 37.0 39.0 33.0 39.0 12 36.7382476303232 39.0 35.0 39.0 33.0 39.0 13 36.66129612116574 39.0 35.0 39.0 33.0 39.0 14 37.77210723765109 40.0 36.0 41.0 33.0 41.0 15 37.834751409533574 40.0 36.0 41.0 33.0 41.0 16 37.88696972540866 40.0 36.0 41.0 33.0 41.0 17 37.802338032981766 40.0 36.0 41.0 33.0 41.0 18 37.70677610855635 39.0 36.0 41.0 33.0 41.0 19 37.64345911450249 39.0 36.0 41.0 33.0 41.0 20 37.51681646344838 39.0 35.0 41.0 33.0 41.0 21 37.44567249731088 39.0 35.0 41.0 32.0 41.0 22 37.359754838616524 39.0 35.0 41.0 32.0 41.0 23 37.25276937552188 39.0 35.0 41.0 32.0 41.0 24 37.13812875544743 39.0 35.0 41.0 32.0 41.0 25 37.01642735277202 39.0 35.0 41.0 32.0 41.0 26 36.86996388032621 39.0 35.0 41.0 31.0 41.0 27 36.77137858760284 39.0 35.0 41.0 31.0 41.0 28 36.795962104422195 39.0 35.0 41.0 31.0 41.0 29 36.77765633610307 39.0 35.0 41.0 31.0 41.0 30 36.6691230932494 39.0 35.0 41.0 31.0 41.0 31 36.55208139319429 38.0 35.0 41.0 31.0 41.0 32 36.44355440691303 39.0 35.0 41.0 30.0 41.0 33 36.28796163277289 39.0 35.0 41.0 30.0 41.0 34 36.088745629423215 39.0 35.0 41.0 30.0 41.0 35 35.95336447181294 38.0 35.0 41.0 29.0 41.0 36 35.835309688302374 38.0 35.0 41.0 29.0 41.0 37 35.759489656201346 38.0 35.0 41.0 28.0 41.0 38 35.648864793063865 38.0 35.0 41.0 28.0 41.0 39 35.55368066935699 38.0 35.0 41.0 27.0 41.0 40 35.423078089242786 38.0 35.0 40.0 27.0 41.0 41 35.34611310439091 38.0 35.0 40.0 27.0 41.0 42 35.25859665080866 38.0 34.0 40.0 27.0 41.0 43 35.128942182051816 38.0 34.0 40.0 26.0 41.0 44 34.97744361264117 37.0 34.0 40.0 26.0 41.0 45 34.854897091415744 37.0 34.0 40.0 25.0 41.0 46 34.77266311004589 37.0 34.0 40.0 25.0 41.0 47 34.70067210025917 37.0 34.0 40.0 25.0 41.0 48 34.585323043678095 36.0 34.0 40.0 24.0 41.0 49 34.47710503581888 36.0 34.0 40.0 24.0 41.0 50 34.372650596901074 36.0 34.0 40.0 24.0 41.0 51 34.01318933591297 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 9.0 13 10.0 14 17.0 15 61.0 16 164.0 17 371.0 18 828.0 19 1636.0 20 2857.0 21 4562.0 22 6770.0 23 9997.0 24 14648.0 25 21555.0 26 28910.0 27 34318.0 28 37255.0 29 40665.0 30 45953.0 31 54003.0 32 66700.0 33 86241.0 34 144431.0 35 210197.0 36 164101.0 37 213217.0 38 317674.0 39 570305.0 40 358.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.03309967441759 24.242437368100624 26.397104650799037 14.327358306682742 2 33.897820547065066 25.20955908009135 26.819086396045844 14.073533976797743 3 30.102006194006687 25.849221417691183 30.10585639241222 13.942915995889912 4 25.883247546100108 28.57963774445752 30.057103255102113 15.480011454340255 5 23.6465229098837 32.542983855636805 28.59037017251295 15.220123061966536 6 23.016774833178122 40.44883687912543 25.99620274182254 10.538185545873912 7 88.0627967359943 3.239701320858691 7.079119170859774 1.6183827722872344 8 87.71262119101075 2.9630164379408175 7.129989917292925 2.1943724537555074 9 82.3675351270445 4.795422114095817 9.428606492878336 3.4084362659813316 10 42.955123531209466 28.30492608822248 15.397905973342189 13.342044407225858 11 33.26316346739243 26.50134877262894 23.561674162521687 16.67381359745694 12 28.78114750350729 22.834419811195897 28.130993375252366 20.253439310044445 13 24.367280051400147 26.498076103984236 30.117310732668695 19.017333111946925 14 22.414459420111992 27.42063176943087 30.368728688550235 19.796180121906907 15 21.867394354165313 23.667506491193873 34.47708289717804 19.988016257462768 16 25.11691368095812 22.28042438811925 32.9235759680241 19.679085962898526 17 24.25495051291862 22.584060659875878 29.00628785527104 24.15470097193446 18 25.676828784083277 22.094844824972387 30.065236799233812 22.163089591710524 19 27.9244783582754 24.770155187059483 26.31793494608519 20.987431508579927 20 29.920324956745425 24.302741100627344 25.641936361033103 20.134997581594128 21 28.309065051508437 24.84484903612689 26.955527802042052 19.890558110322623 22 26.952880790638247 22.576504645505015 26.74506633169941 23.72554823215734 23 25.290798266448167 26.07513180913604 26.17985720576663 22.45421271864916 24 24.136749421868643 24.83589732483402 30.14604283827001 20.881310415027325 25 25.147811523162556 24.24508437950443 28.510189790717654 22.09691430661536 26 22.95752990521293 26.33391326946817 27.526800990463542 23.181755834855363 27 23.19244013543073 24.971520563669046 28.050716738496927 23.785322562403294 28 22.827393199105792 26.585234970389564 29.168236825703925 21.419135004800715 29 24.117979704641655 24.198063831476816 28.71372090393033 22.9702355599512 30 25.033605012958326 24.494240343822717 28.783265112630335 21.68888953058862 31 26.837567348392422 25.080096158705178 26.14198087895217 21.94035561395023 32 28.029011244985718 24.218132990665676 26.035426638078945 21.717429126269664 33 26.389885528788653 24.346633362450458 25.665181933906535 23.598299174854354 34 24.10849859106802 26.486669891207832 27.634991565659117 21.769839952065027 35 24.512673168689226 26.53999513912451 27.387423808183115 21.55990788400315 36 26.736307130326807 27.18726161857528 24.575768295059955 21.500662956037953 37 25.289113804645748 26.99494420821873 25.369823588721808 22.34611839841372 38 24.586693233035664 27.970199464341146 25.458907554329908 21.98419974829328 39 25.1108496184694 26.417751339748722 24.848410469652013 23.62298857212986 40 26.009437798841574 25.430752978489423 25.98980178697333 22.570007435695672 41 22.345733378573165 25.415448439827415 26.669698697911027 25.569119483688397 42 24.489716360696214 25.65392010357034 25.518874394496144 24.33748914123731 43 23.707452299651315 24.61667665311878 26.998024366943156 24.677846680286745 44 23.662645615706886 25.66936902467255 26.816631894562313 23.85135346505825 45 23.15105050257121 25.752581437712212 26.00053421502877 25.09583384468781 46 24.33195448102935 25.91188339674129 26.403168713287755 23.352993408941604 47 23.57433168977989 25.7472874149046 27.859458132701903 22.81892276261361 48 24.567394113527914 24.788395502005713 27.879767929291106 22.764442455175267 49 24.3321951184297 24.798694782740522 27.35084692333052 23.518263175499264 50 23.244947216186233 25.96645995913977 27.61054280578396 23.178050018890037 51 23.570962766175043 25.93662092149686 26.30484427150637 24.187572040821728 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1184.0 1 1891.0 2 2598.0 3 12936.5 4 23275.0 5 16209.5 6 9144.0 7 9125.5 8 9107.0 9 9464.0 10 9821.0 11 10168.5 12 10516.0 13 10381.5 14 10247.0 15 9913.0 16 9579.0 17 9525.5 18 9472.0 19 9458.5 20 9445.0 21 9183.0 22 8921.0 23 9711.5 24 10502.0 25 11001.0 26 13343.5 27 15187.0 28 17094.5 29 19002.0 30 22639.0 31 26276.0 32 29849.5 33 33423.0 34 38371.5 35 43320.0 36 47459.5 37 51599.0 38 58174.5 39 64750.0 40 74182.5 41 83615.0 42 93520.5 43 103426.0 44 109337.0 45 115248.0 46 120832.0 47 126416.0 48 134573.0 49 142730.0 50 151556.0 51 160382.0 52 158673.0 53 156964.0 54 147200.0 55 137436.0 56 126998.5 57 116561.0 58 113283.0 59 110005.0 60 104577.5 61 99150.0 62 93756.0 63 88362.0 64 79601.0 65 70840.0 66 62187.0 67 53534.0 68 46422.5 69 39311.0 70 33260.5 71 27210.0 72 24249.5 73 21289.0 74 18844.0 75 13087.5 76 9776.0 77 7449.0 78 5122.0 79 3969.5 80 2817.0 81 2097.5 82 1378.0 83 979.0 84 580.0 85 415.0 86 250.0 87 172.5 88 95.0 89 65.0 90 35.0 91 22.5 92 10.0 93 7.5 94 5.0 95 2.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2077815.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.47846216244133 #Duplication Level Percentage of deduplicated Percentage of total 1 75.52031066307524 17.731007563988264 2 6.274163869313094 2.9461543801324797 3 2.4136524313686434 1.7000654184951964 4 1.4859944237684757 1.3955545540818783 5 1.129226642572697 1.325625250023186 6 0.864542769684728 1.2178880823513067 7 0.7173944382508658 1.1790322721813162 8 0.6446187140011683 1.2107724868702414 9 0.5543841427455729 1.1714478407018463 >10 9.48424794707438 54.7940551980286 >50 0.8596797911691474 12.231682707521534 >100 0.0490914040361534 2.0101723821895425 >500 0.0022784917182438755 0.3775322032872425 >1k 2.071356107494432E-4 0.05189061714639801 >5k 0.0 0.0 >10k+ 2.071356107494432E-4 0.657119043001059 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13512 0.6502985106951292 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03855011153543506 0.0 2 0.0 0.0 0.0 0.11945240553177255 0.0 3 0.0 0.0 0.0 0.19462752939987438 0.0 4 0.0 0.0 0.0 0.3268818446300561 0.0 5 0.0 0.0 0.0 0.5537547856762994 0.0 6 0.0 0.0 0.0 1.0856596954011786 0.0 7 0.0 0.0 0.0 1.3430454588112994 0.0 8 0.0 0.0 0.0 1.9633124219432432 0.0 9 0.0 0.0 0.0 2.338177364202299 0.0 10 0.0 0.0 0.0 2.8480880155355504 0.0 11 0.0 0.0 0.0 3.238642516297168 0.0 12 0.0 0.0 0.0 3.5403536888510287 0.0 13 0.0 0.0 0.0 3.715008314022182 0.0 14 0.0 0.0 0.0 3.8149209626458562 0.0 15 0.0 0.0 0.0 3.9073738518588037 0.0 16 0.0 0.0 0.0 4.054355175990163 0.0 17 0.0 0.0 0.0 4.211347015975917 0.0 18 0.0 0.0 0.0 4.416081316190325 0.0 19 0.0 0.0 0.0 4.5348118095210594 0.0 20 0.0 0.0 0.0 4.655756166934977 0.0 21 0.0 0.0 0.0 4.802833746026475 0.0 22 0.0 0.0 0.0 4.95732295704863 0.0 23 0.0 0.0 0.0 5.131544434899161 0.0 24 0.0 0.0 0.0 5.278910778871074 0.0 25 0.0 0.0 0.0 5.407796170496411 0.0 26 0.0 0.0 0.0 5.530280607272544 0.0 27 0.0 0.0 0.0 5.662294285102379 0.0 28 0.0 0.0 0.0 5.799794495660104 0.0 29 0.0 4.8127480069207316E-5 0.0 5.9446100831883495 0.0 30 0.0 4.8127480069207316E-5 0.0 6.149296255922688 0.0 31 0.0 4.8127480069207316E-5 0.0 6.307587537870311 0.0 32 0.0 4.8127480069207316E-5 0.0 6.49581411242098 0.0 33 0.0 4.8127480069207316E-5 0.0 6.660458221737739 0.0 34 0.0 4.8127480069207316E-5 0.0 6.826690537896781 0.0 35 4.8127480069207316E-5 4.8127480069207316E-5 0.0 7.0080348827975545 0.0 36 4.8127480069207316E-5 4.8127480069207316E-5 0.0 7.166181782304969 0.0 37 4.8127480069207316E-5 4.8127480069207316E-5 0.0 7.337852503711832 0.0 38 4.8127480069207316E-5 4.8127480069207316E-5 0.0 7.5369558887581425 0.0 39 4.8127480069207316E-5 4.8127480069207316E-5 0.0 7.787315040078159 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTAAG 55 1.8189894E-12 44.999996 1 CGTTTTT 8665 0.0 41.208885 1 CGTAAGG 315 0.0 39.999996 2 CATATGC 1010 0.0 39.207924 33 CGTTAGG 310 0.0 38.46774 2 CACGACC 2225 0.0 38.224716 27 AGGGCGA 2585 0.0 38.21083 6 AACACGT 2050 0.0 38.08537 41 ACACGAC 2270 0.0 37.56608 26 TTAACGG 90 0.0 37.5 2 ACGACCA 2280 0.0 37.401318 28 GGGCGAT 5095 0.0 37.315994 7 CGACCAA 2280 0.0 37.20395 29 TCGATAG 85 0.0 37.058826 1 TCAAGCG 2300 0.0 36.97826 17 GCCAGTA 1140 0.0 36.907894 25 TAGGGCG 1015 0.0 36.798027 5 CCAGTAG 1145 0.0 36.746723 26 TACGGGA 485 0.0 36.649487 4 TAATACG 80 0.0 36.5625 1 >>END_MODULE