SRR1547004_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547004_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1378096
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23395	1.6976320952966992	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	14920	0.0	43.67292	1
GCGTAAG	65	0.0	41.53846	1
TCGTTTA	45	1.9288564E-8	40.0	38
GCGATAT	135	0.0	40.0	9
TGCGTAG	45	1.9288564E-8	40.0	1
TCTAGCG	40	3.458881E-7	39.375	1
TACGGGA	455	0.0	38.57143	4
TACGAAT	70	0.0	38.571426	12
TAGGGAT	1800	0.0	38.250004	5
GCGATAC	100	0.0	38.25	9
TAGGGCG	690	0.0	38.152176	5
GGCGATA	700	0.0	37.92857	8
CGACCAA	1080	0.0	37.708332	29
GGGCGAT	3300	0.0	37.704544	7
CACGACC	1075	0.0	37.67442	27
TAGCATA	520	0.0	37.64423	30
TATTACG	30	1.1400397E-4	37.500004	1
ACGACCA	1090	0.0	37.362385	28
ACACGAC	1080	0.0	37.291664	26
GCGCGAC	145	0.0	37.24138	9