##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547002_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2394660 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.61405794559562 31.0 31.0 33.0 30.0 34.0 2 32.01184009420962 31.0 31.0 34.0 30.0 34.0 3 32.11390719350555 33.0 31.0 34.0 30.0 34.0 4 35.797427192169245 37.0 35.0 37.0 35.0 37.0 5 35.747530338336134 37.0 35.0 37.0 33.0 37.0 6 35.79751655767416 37.0 35.0 37.0 35.0 37.0 7 36.119613640349776 37.0 35.0 37.0 35.0 37.0 8 36.0514578269984 37.0 35.0 37.0 35.0 37.0 9 37.81176659734576 39.0 38.0 39.0 35.0 39.0 10 37.351739704175124 39.0 37.0 39.0 34.0 39.0 11 37.080502868883265 39.0 37.0 39.0 33.0 39.0 12 36.72267127692449 39.0 35.0 39.0 33.0 39.0 13 36.63471432270134 39.0 35.0 39.0 33.0 39.0 14 37.747899910634494 40.0 36.0 41.0 33.0 41.0 15 37.82507412325758 40.0 36.0 41.0 33.0 41.0 16 37.88606232199978 40.0 36.0 41.0 33.0 41.0 17 37.83706455196145 40.0 36.0 41.0 33.0 41.0 18 37.729491869409436 39.0 36.0 41.0 33.0 41.0 19 37.67489748022684 39.0 36.0 41.0 33.0 41.0 20 37.54173285560372 39.0 35.0 41.0 33.0 41.0 21 37.473793356885736 39.0 35.0 41.0 33.0 41.0 22 37.40097216306282 39.0 35.0 41.0 32.0 41.0 23 37.29817218310741 39.0 35.0 41.0 32.0 41.0 24 37.187204446560266 39.0 35.0 41.0 32.0 41.0 25 37.05310524249789 39.0 35.0 41.0 32.0 41.0 26 36.90371660277451 39.0 35.0 41.0 31.0 41.0 27 36.817459263528015 39.0 35.0 41.0 31.0 41.0 28 36.83049242898783 39.0 35.0 41.0 31.0 41.0 29 36.814366966500465 39.0 35.0 41.0 31.0 41.0 30 36.72862118213024 39.0 35.0 41.0 31.0 41.0 31 36.62185905305972 39.0 35.0 41.0 31.0 41.0 32 36.54685675628273 39.0 35.0 41.0 31.0 41.0 33 36.394766689216844 39.0 35.0 41.0 30.0 41.0 34 36.213400232183275 39.0 35.0 41.0 30.0 41.0 35 36.09137706396733 39.0 35.0 41.0 30.0 41.0 36 35.98773896920648 38.0 35.0 41.0 29.0 41.0 37 35.915911235833065 38.0 35.0 41.0 29.0 41.0 38 35.824692440680515 38.0 35.0 41.0 29.0 41.0 39 35.7355624598064 38.0 35.0 41.0 29.0 41.0 40 35.60183157525494 38.0 35.0 41.0 28.0 41.0 41 35.51856631003984 38.0 35.0 40.0 28.0 41.0 42 35.413562676956225 38.0 35.0 40.0 27.0 41.0 43 35.28519622827458 38.0 34.0 40.0 27.0 41.0 44 35.1300802619161 37.0 34.0 40.0 26.0 41.0 45 35.01569241562476 37.0 34.0 40.0 26.0 41.0 46 34.95639297436797 37.0 34.0 40.0 26.0 41.0 47 34.88550107322125 37.0 34.0 40.0 26.0 41.0 48 34.78069078700108 37.0 34.0 40.0 26.0 41.0 49 34.683768468175025 36.0 34.0 40.0 26.0 41.0 50 34.576111431267904 36.0 34.0 40.0 26.0 41.0 51 34.196999991648084 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 1.0 12 6.0 13 7.0 14 29.0 15 59.0 16 160.0 17 403.0 18 935.0 19 1741.0 20 3127.0 21 5036.0 22 7499.0 23 11056.0 24 16154.0 25 23330.0 26 31191.0 27 37056.0 28 40571.0 29 45446.0 30 52685.0 31 62675.0 32 75967.0 33 99249.0 34 165972.0 35 245193.0 36 184366.0 37 243069.0 38 360057.0 39 681135.0 40 481.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.415557949771575 24.428979479341535 27.90993293411173 14.245529636775158 2 32.21651507938497 26.106754194749985 28.17264246281309 13.504088263051958 3 29.597228834156 25.498859963418607 30.927772627429363 13.976138574996034 4 25.995590188168677 28.636925492554266 29.97836853666074 15.389115782616322 5 23.737106729139 32.766864607084095 28.583431468350412 14.91259719542649 6 22.379628005645895 41.948627362548336 25.230304093274203 10.441440538531566 7 88.34018190473805 3.4575680889980207 6.630544628465001 1.5717053777989358 8 88.05817944927463 3.061645494558727 6.536418531231991 2.3437565249346464 9 82.15567136879557 5.314324371727093 9.122380630235607 3.4076236292417295 10 44.63372670859329 27.384680915035954 14.841898223547393 13.139694152823363 11 32.54846199460466 24.92637785739938 24.66838716143419 17.85677298656177 12 29.245446117611685 21.4782474338737 28.958014916522597 20.318291531992017 13 24.143302180685357 26.2712451872082 30.11955768251025 19.465894949596183 14 21.68788053418857 27.74886622735587 30.3655633785172 20.197689859938365 15 20.661972889679536 23.142659083126624 35.79226278469595 20.40310524249789 16 23.682693994136955 21.43682192879156 33.86230195518362 21.018182121887868 17 23.78245763490433 21.577050604261146 28.77251885445115 25.86797290638337 18 24.12476092639456 22.54754328380647 31.156949211996693 22.170746577802277 19 26.896636683286978 24.514461343155187 27.05198232734501 21.536919646212823 20 28.32673531941904 23.78538080562585 26.70604595224374 21.181837922711367 21 26.205766163046114 24.70964562818939 28.228475023594164 20.85611318517034 22 26.085916163463708 23.179658072544747 27.036155445867056 23.698270318124493 23 24.409978869651642 25.36276548654089 26.36491192904212 23.862343714765352 24 23.67200354121253 23.89758880175056 30.753509892844917 21.67689776419199 25 24.096656727886216 24.298355507671236 28.706747513216907 22.898240251225644 26 22.476510235273484 26.431852538564975 27.335070531933553 23.756566694227992 27 22.43328906817669 25.42373447587549 28.168424745057752 23.97455171089006 28 22.154669138833903 25.744782140262085 30.163321724169613 21.937226996734402 29 23.069830372578988 23.80312862786366 29.9875974042244 23.13944359533295 30 24.274552546081697 24.786608537328892 29.44835592526705 21.49048299132236 31 26.32544912430157 24.55083393884727 26.748933042686645 22.374783894164516 32 27.5062012978878 24.136704166771068 26.790442066932258 21.566652468408876 33 26.316262016319648 24.365170838448883 26.744297729113946 22.574269416117527 34 23.800163697560407 24.557724269833713 28.324730859495713 23.317381173110167 35 23.77226829696074 24.899317648434433 28.364110145072786 22.964303909532042 36 26.50894072644968 24.826029582487703 26.885403355799987 21.779626335262627 37 24.35193305103856 26.160415257280782 27.0544043830857 22.433247308594957 38 24.283530856154943 26.175323427960546 26.583314541521553 22.95783117436296 39 23.505842165484868 25.537529336106168 26.314215796814576 24.64241270159438 40 24.782056742919664 23.739194708225803 27.37954448648242 24.099204062372113 41 21.825144279354898 23.745458645486206 27.672863788596292 26.7565332865626 42 23.816575213182663 24.707265332030435 26.274293636674933 25.20186581811197 43 23.267812549589504 23.91496078775275 28.326108925693 24.491117736964746 44 23.03425120893989 25.380429789615228 27.402554016018975 24.182764985425905 45 22.211378650831435 26.162753793858002 27.099838808014496 24.526028747296067 46 23.82776678108792 25.112876149432488 27.78636633175482 23.272990737724772 47 23.107748072795303 24.78472935615077 28.348617340248722 23.758905230805208 48 23.33796864690603 24.267244619277896 28.68432261782466 23.710464115991414 49 23.66624071893296 23.717354446977858 28.418940475892196 24.19746435819699 50 22.518687412826875 25.322300451838675 28.712552095078216 23.446460040256238 51 21.925158477612687 25.59874888293119 27.755297202943215 24.72079543651291 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1325.0 1 2309.5 2 3294.0 3 13820.5 4 24347.0 5 16842.5 6 9338.0 7 9449.0 8 9560.0 9 9975.0 10 10390.0 11 10603.0 12 10816.0 13 10679.5 14 10543.0 15 10466.0 16 10389.0 17 10047.5 18 9706.0 19 9821.5 20 9937.0 21 9651.5 22 9366.0 23 10966.5 24 12567.0 25 12981.0 26 16295.0 27 19195.0 28 21342.0 29 23489.0 30 27287.0 31 31085.0 32 37048.5 33 43012.0 34 48742.5 35 54473.0 36 59229.5 37 63986.0 38 72425.5 39 80865.0 40 90368.5 41 99872.0 42 110833.5 43 121795.0 44 132369.0 45 142943.0 46 146444.0 47 149945.0 48 160757.0 49 171569.0 50 180021.5 51 188474.0 52 181916.5 53 175359.0 54 162095.0 55 148831.0 56 141988.5 57 135146.0 58 129898.0 59 124650.0 60 117346.0 61 110042.0 62 103488.5 63 96935.0 64 85498.0 65 74061.0 66 66712.0 67 59363.0 68 51302.5 69 43242.0 70 37968.0 71 32694.0 72 28307.5 73 23921.0 74 19287.5 75 11758.5 76 8863.0 77 7213.5 78 5564.0 79 4279.5 80 2995.0 81 2236.5 82 1478.0 83 1091.0 84 704.0 85 484.0 86 264.0 87 200.5 88 137.0 89 91.0 90 45.0 91 36.0 92 27.0 93 15.5 94 4.0 95 3.0 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2394660.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.536157188298827 #Duplication Level Percentage of deduplicated Percentage of total 1 77.53943644160034 17.474409279400117 2 6.940624016462326 3.1282998763975387 3 2.433121558902025 1.6449962972896415 4 1.3117134706239966 1.1824392383996554 5 0.9038171941425307 1.0184283178341635 6 0.6454668499383829 0.8727805434028492 7 0.5573810133275166 0.8792858291085537 8 0.48476850806462857 0.8739855438145263 9 0.3948383638902847 0.800832548934197 >10 6.69676264380165 38.57214161605773 >50 2.000115404951152 29.554702862839406 >100 0.08840351067467597 2.7304164043330577 >500 0.002803439700276601 0.4548028174804548 >1k 5.606879400553203E-4 0.19366395209993809 >5k 0.0 0.0 >10k+ 1.868959800184401E-4 0.6188148726081536 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14692 0.613531774865743 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.1759581736029334E-5 0.0 0.0 0.057210626978360185 0.0 2 4.1759581736029334E-5 0.0 0.0 0.16933510393959894 0.0 3 4.1759581736029334E-5 0.0 0.0 0.2554016018975554 0.0 4 4.1759581736029334E-5 0.0 0.0 0.4147144062205073 0.0 5 4.1759581736029334E-5 0.0 0.0 0.6850241787978252 0.0 6 4.1759581736029334E-5 0.0 0.0 1.2651065286930085 0.0 7 4.1759581736029334E-5 0.0 0.0 1.5339547159095654 0.0 8 4.1759581736029334E-5 0.0 0.0 2.250757936408509 0.0 9 4.1759581736029334E-5 0.0 0.0 2.6769144680246884 0.0 10 4.1759581736029334E-5 0.0 0.0 3.311158995431502 0.0 11 4.1759581736029334E-5 0.0 0.0 3.858418314082166 0.0 12 4.1759581736029334E-5 0.0 0.0 4.296768643565266 0.0 13 4.1759581736029334E-5 0.0 0.0 4.531039897104391 0.0 14 4.1759581736029334E-5 0.0 0.0 4.64884367718173 0.0 15 4.1759581736029334E-5 0.0 0.0 4.766480418932124 0.0 16 4.1759581736029334E-5 0.0 0.0 4.974109059323662 0.0 17 8.351916347205867E-5 0.0 0.0 5.204329633434392 0.0 18 8.351916347205867E-5 0.0 0.0 5.491176200379177 0.0 19 8.351916347205867E-5 0.0 0.0 5.655667192837397 0.0 20 8.351916347205867E-5 0.0 0.0 5.834189404758922 0.0 21 8.351916347205867E-5 0.0 0.0 6.034468358764919 0.0 22 8.351916347205867E-5 0.0 0.0 6.255543584475458 0.0 23 8.351916347205867E-5 0.0 0.0 6.4862235139852835 0.0 24 8.351916347205867E-5 0.0 0.0 6.680238530730876 0.0 25 1.25278745208088E-4 0.0 0.0 6.84773621307409 0.0 26 1.25278745208088E-4 0.0 0.0 7.005462153291073 0.0 27 1.25278745208088E-4 0.0 0.0 7.177762187533929 0.0 28 1.25278745208088E-4 0.0 0.0 7.339705845506251 0.0 29 1.25278745208088E-4 0.0 0.0 7.515764242105351 0.0 30 1.25278745208088E-4 0.0 0.0 7.758220373664737 0.0 31 1.25278745208088E-4 0.0 0.0 7.943048282428403 0.0 32 1.6703832694411734E-4 0.0 0.0 8.138357846207812 0.0 33 1.6703832694411734E-4 0.0 0.0 8.321765929192454 0.0 34 1.6703832694411734E-4 0.0 0.0 8.50722023168216 0.0 35 1.6703832694411734E-4 0.0 0.0 8.72027761769938 0.0 36 1.6703832694411734E-4 0.0 0.0 8.910617791252204 0.0 37 1.6703832694411734E-4 0.0 0.0 9.117118922936868 0.0 38 1.6703832694411734E-4 0.0 0.0 9.338027110320462 0.0 39 1.6703832694411734E-4 0.0 0.0 9.608879757460349 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 8550 0.0 40.657894 1 TAATCCG 40 3.460318E-7 39.375004 1 CTAATCC 1350 0.0 38.833332 11 TACGGGA 735 0.0 37.959187 4 GGGCGAT 5140 0.0 37.68969 7 GACTAAT 1415 0.0 37.5265 9 TCGTTAG 150 0.0 37.500004 1 CATATGC 1375 0.0 36.81818 33 AGGGCGA 2860 0.0 36.81818 6 ACTAATC 1425 0.0 36.789474 10 TAGGGAC 1995 0.0 36.76692 5 CGTAAGG 325 0.0 36.692307 2 ATAGGGA 2430 0.0 36.48148 4 ACGACCA 605 0.0 36.44628 28 GGCGATA 1070 0.0 36.378506 8 CGTTAGG 435 0.0 36.206894 2 GCGATAA 255 0.0 36.17647 9 CACGACC 610 0.0 36.14754 27 GGTACCT 1525 0.0 36.147537 8 CCCTACA 1385 0.0 36.064983 27 >>END_MODULE