##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546991_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1598191 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.615722401139788 31.0 31.0 33.0 30.0 34.0 2 31.991481618905375 31.0 31.0 34.0 30.0 34.0 3 32.086722425542376 33.0 31.0 34.0 30.0 34.0 4 35.751112351402305 37.0 35.0 37.0 35.0 37.0 5 35.70076417649705 37.0 35.0 37.0 33.0 37.0 6 35.75340056351212 37.0 35.0 37.0 33.0 37.0 7 36.08890113885011 37.0 35.0 37.0 35.0 37.0 8 36.01743346070651 37.0 35.0 37.0 35.0 37.0 9 37.7836322442061 39.0 38.0 39.0 35.0 39.0 10 37.350839793241235 39.0 37.0 39.0 34.0 39.0 11 37.06281664707159 39.0 37.0 39.0 33.0 39.0 12 36.38141185878283 38.0 35.0 39.0 33.0 39.0 13 36.08407693448405 38.0 35.0 39.0 32.0 39.0 14 37.11069390329441 39.0 35.0 41.0 32.0 41.0 15 37.31524204553774 39.0 35.0 41.0 32.0 41.0 16 37.445557508458 39.0 35.0 41.0 33.0 41.0 17 37.398230874782804 39.0 35.0 41.0 33.0 41.0 18 37.34962654651415 39.0 35.0 41.0 33.0 41.0 19 37.279530419080075 39.0 35.0 41.0 33.0 41.0 20 37.10712236522418 38.0 35.0 41.0 32.0 41.0 21 37.013428933087475 38.0 35.0 41.0 32.0 41.0 22 36.906412312420734 38.0 35.0 41.0 32.0 41.0 23 36.82930763594589 38.0 35.0 41.0 32.0 41.0 24 36.70502461845925 38.0 35.0 41.0 32.0 41.0 25 36.59506529569995 38.0 35.0 41.0 31.0 41.0 26 36.42980594935148 38.0 35.0 40.0 31.0 41.0 27 36.32591786588712 38.0 35.0 40.0 31.0 41.0 28 36.36631416395162 38.0 35.0 40.0 31.0 41.0 29 36.382278463587895 38.0 35.0 40.0 31.0 41.0 30 36.32762792432194 38.0 35.0 40.0 31.0 41.0 31 36.189506761081745 38.0 35.0 40.0 31.0 41.0 32 36.03422932553118 38.0 35.0 40.0 30.0 41.0 33 35.88481602011274 38.0 35.0 40.0 30.0 41.0 34 35.707056290518466 38.0 35.0 40.0 30.0 41.0 35 35.60876703723147 37.0 35.0 40.0 29.0 41.0 36 35.43275928847053 37.0 35.0 40.0 29.0 41.0 37 35.317217403927316 37.0 35.0 40.0 28.0 41.0 38 35.23103058395398 37.0 34.0 40.0 28.0 41.0 39 35.09341999798522 37.0 34.0 40.0 27.0 41.0 40 34.92750616165402 36.0 34.0 40.0 26.0 41.0 41 34.854821482538696 36.0 34.0 40.0 26.0 41.0 42 34.75889677766925 36.0 34.0 40.0 26.0 41.0 43 34.62738621353768 36.0 34.0 40.0 26.0 41.0 44 34.4986087395061 36.0 34.0 40.0 25.0 41.0 45 34.386099658926874 35.0 34.0 40.0 24.0 41.0 46 34.31458192418803 35.0 34.0 40.0 24.0 41.0 47 34.25842780994262 35.0 34.0 40.0 24.0 41.0 48 34.16546144985174 35.0 34.0 40.0 24.0 41.0 49 34.087271170967675 35.0 34.0 40.0 24.0 41.0 50 33.956246155809914 35.0 34.0 39.0 24.0 41.0 51 33.57622524466725 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 2.0 12 7.0 13 6.0 14 15.0 15 56.0 16 157.0 17 353.0 18 848.0 19 1479.0 20 2420.0 21 3841.0 22 5919.0 23 8501.0 24 12594.0 25 17561.0 26 22588.0 27 26323.0 28 29280.0 29 32889.0 30 38268.0 31 45119.0 32 55099.0 33 72260.0 34 131631.0 35 240457.0 36 116194.0 37 145205.0 38 210479.0 39 378301.0 40 337.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.56145104058276 24.25461036884828 28.256948011845896 12.92699057872307 2 31.436355229130935 27.11503193297922 28.06397983720344 13.384633000686403 3 30.33073018181181 25.23108940045339 30.55467087475777 13.883509542977029 4 25.881699997059176 28.487521203660886 29.796000603181973 15.834778196097963 5 23.577219493790167 33.441059297668424 28.17110095101274 14.810620257528667 6 22.035538931204094 42.020196584763646 25.453090400333878 10.491174083698382 7 87.2645384688063 4.107894488205727 6.894107149896351 1.7334598930916267 8 86.59959917181364 3.8984076371347354 6.276721618379781 3.225271572671852 9 81.06221346509898 5.855870793916371 9.267665754593787 3.814249986390863 10 49.94534445507452 23.14003770513036 13.804294981012907 13.110322858782212 11 41.6988958140798 23.657748041379286 19.602412978173447 15.040943166367473 12 37.1641437099821 20.397499422784886 24.544438055276245 17.89391881195677 13 23.293273457302664 34.59780464287435 25.951528947416175 16.157392952406816 14 18.477578712431743 36.635358352036775 27.083058282770956 17.804004652760526 15 17.200384684934402 23.80335016277779 42.22974600657869 16.766519145709115 16 18.57037112585417 19.179434748412426 42.29075248202499 19.959441643708416 17 18.904624040555852 20.27229536394586 28.044582906548715 32.77849768894957 18 21.9319843498055 22.4789152235246 31.399438490142916 24.189661936526985 19 28.285229988155358 25.263563616614032 24.42423965596102 22.02696673926959 20 30.957376183447412 23.457709372659462 24.131658856794964 21.453255587098162 21 25.39427390092924 27.31187949375262 25.65951128494654 21.634335320371594 22 24.663385039710523 25.051010799084715 23.38644129518937 26.89916286601539 23 24.188473092390083 29.481770326575486 22.423102119834237 23.906654461200194 24 22.673385096024194 24.29972387530652 33.22931989981173 19.797571128857562 25 21.795580127781975 24.09511754227123 31.004804807435406 23.104497522511387 26 21.3003326886461 30.54897693704945 25.450962995036264 22.699727379268186 27 22.350958051947483 29.37421121755785 25.674653405006037 22.60017732548863 28 20.160544015077047 27.72015359866249 32.58139984519998 19.537902541060486 29 20.242761972755446 24.610325048758252 31.001300845768746 24.145612132717552 30 22.954890873493845 26.913116141937977 28.443283687619314 21.688709296948865 31 28.429017557976486 25.377192087804275 22.659869815309936 23.533920538909303 32 30.696581322257476 25.251362321524773 24.51046214125846 19.541594214959286 33 28.520057990565583 25.553891868994384 22.883685366767804 23.042364773672233 34 23.222505945784953 26.475684070301988 26.47155440119485 23.83025558271821 35 25.37249928200071 23.48417679739155 27.43138961488333 23.711934305724412 36 30.909822417971316 24.445513708937167 24.198359269949588 20.446304603141925 37 25.30949054274489 27.691558768632785 26.30943360336781 20.689517085254515 38 25.67252599970842 29.000038168153868 23.185338923820744 22.142096908316965 39 24.383944096794437 27.870260813632413 25.066027777656114 22.679767311917036 40 27.831341810834875 24.156061446973485 25.335269689292456 22.677327052899184 41 21.360025178467403 22.793583495339416 27.281032116937208 28.565359209255963 42 24.5094610093537 25.003582175096717 24.867615948281525 25.619340867268054 43 24.03142052483089 24.29046340518749 26.61634310292074 25.061772967060886 44 23.213495758642114 26.951597149527185 26.925380007771288 22.909527084059413 45 22.356339135935567 28.189809603482942 24.19272790298531 25.261123357596183 46 23.858725271259818 28.32108302449457 25.24279012959027 22.577401574655344 47 24.637105327210577 24.71613217694256 26.78397012622396 23.862792369622905 48 25.067466904769205 22.182267325995454 28.563294374702398 24.186971394532943 49 23.53598537346287 22.307533955578528 29.38153199461141 24.774948676347194 50 22.42172556346519 27.568732398067564 26.772957675271602 23.23658436319564 51 21.254968899211672 28.46931311714307 24.524039992716766 25.751677990928496 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1044.0 1 1682.0 2 2320.0 3 6998.0 4 11676.0 5 8542.5 6 5409.0 7 5788.5 8 6168.0 9 6648.0 10 7128.0 11 7626.5 12 8125.0 13 8028.0 14 7931.0 15 8048.5 16 8166.0 17 7869.5 18 7573.0 19 7625.0 20 7677.0 21 7444.5 22 7212.0 23 6947.5 24 6683.0 25 6599.0 26 7969.0 27 9423.0 28 10623.0 29 11823.0 30 13396.5 31 14970.0 32 16851.5 33 18733.0 34 22058.0 35 25383.0 36 28107.0 37 30831.0 38 36301.0 39 41771.0 40 57522.5 41 73274.0 42 90718.0 43 108162.0 44 111806.5 45 115451.0 46 115383.0 47 115315.0 48 122085.0 49 128855.0 50 134720.5 51 140586.0 52 131274.0 53 121962.0 54 109819.0 55 97676.0 56 88745.0 57 79814.0 58 79557.0 59 79300.0 60 74816.5 61 70333.0 62 64772.5 63 59212.0 64 51744.5 65 44277.0 66 39444.5 67 34612.0 68 31055.0 69 27498.0 70 22846.0 71 18194.0 72 16491.0 73 14788.0 74 12311.0 75 7855.0 76 5876.0 77 4506.0 78 3136.0 79 2535.0 80 1934.0 81 1423.0 82 912.0 83 562.5 84 213.0 85 223.5 86 234.0 87 162.5 88 91.0 89 65.0 90 39.0 91 36.0 92 33.0 93 21.5 94 10.0 95 8.5 96 7.0 97 3.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1598191.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.182426721722955 #Duplication Level Percentage of deduplicated Percentage of total 1 80.7331397067551 17.101238158529615 2 7.434229090694314 3.1495002589226675 3 2.414880545724294 1.5345909060455758 4 1.140855823985302 0.9666437956647806 5 0.6890931029519817 0.7298332078862521 6 0.5071007771354621 0.6444975031320413 7 0.3849300551419668 0.5707626880223441 8 0.29345225037072553 0.4972824631842073 9 0.23735156388042838 0.4524913898265167 >10 3.372012941246188 17.999133820318246 >50 1.8305437184428803 28.675554350965804 >100 0.9561648677699753 25.89656992667959 >500 0.0032714816626517613 0.42756817004388675 >1k 0.002676666814896896 0.9304820792026236 >5k 2.9740742387743285E-4 0.4238512815758464 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6728 0.42097596595150394 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3336 0.20873600214242224 No Hit GAGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT 2016 0.12614261999973722 No Hit GAGAGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT 1620 0.10136460535693168 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2514148809497739E-4 0.0 0.0 0.09842378038669972 0.0 2 1.2514148809497739E-4 0.0 0.0 0.3233656052374216 0.0 3 1.2514148809497739E-4 0.0 0.0 0.4670906043145031 0.0 4 1.2514148809497739E-4 0.0 0.0 0.9003304360993147 0.0 5 1.2514148809497739E-4 0.0 0.0 1.4166642159791916 0.0 6 1.2514148809497739E-4 0.0 0.0 2.326442834429677 0.0 7 1.2514148809497739E-4 0.0 0.0 2.703118713595559 0.0 8 1.2514148809497739E-4 0.0 0.0 3.816127108712288 0.0 9 1.2514148809497739E-4 0.0 0.0 4.275458940764902 0.0 10 1.2514148809497739E-4 0.0 0.0 5.040824281953784 0.0 11 1.2514148809497739E-4 0.0 0.0 5.749312816803498 0.0 12 1.2514148809497739E-4 0.0 0.0 6.307256141474955 0.0 13 1.2514148809497739E-4 0.0 0.0 6.566424163319653 0.0 14 1.2514148809497739E-4 0.0 0.0 6.66616192933135 0.0 15 1.2514148809497739E-4 0.0 0.0 6.7967470721584595 0.0 16 1.2514148809497739E-4 0.0 0.0 7.066426979003135 0.0 17 1.2514148809497739E-4 0.0 0.0 7.336857734776381 0.0 18 1.2514148809497739E-4 0.0 0.0 7.733431110549365 0.0 19 1.2514148809497739E-4 0.0 0.0 7.906376647096623 0.0 20 1.2514148809497739E-4 0.0 0.0 8.0963414260248 0.0 21 1.2514148809497739E-4 0.0 0.0 8.332796267780259 0.0 22 1.2514148809497739E-4 0.0 0.0 8.566935992005961 0.0 23 1.2514148809497739E-4 0.0 0.0 8.826229155338755 0.0 24 1.2514148809497739E-4 0.0 0.0 9.02764438042762 0.0 25 1.2514148809497739E-4 0.0 0.0 9.196898243076078 0.0 26 1.2514148809497739E-4 0.0 0.0 9.359519606855502 0.0 27 1.2514148809497739E-4 0.0 0.0 9.50831283620043 0.0 28 1.2514148809497739E-4 0.0 0.0 9.659984319771542 0.0 29 1.2514148809497739E-4 0.0 0.0 9.818038019235498 0.0 30 1.2514148809497739E-4 0.0 0.0 10.031028831973149 0.0 31 1.2514148809497739E-4 0.0 0.0 10.222557879502512 0.0 32 1.2514148809497739E-4 0.0 0.0 10.408580701555696 0.0 33 1.2514148809497739E-4 0.0 0.0 10.583465931168428 0.0 34 1.2514148809497739E-4 0.0 0.0 10.760916561287106 0.0 35 1.2514148809497739E-4 0.0 0.0 10.966148601762868 0.0 36 1.2514148809497739E-4 0.0 0.0 11.149105457357726 0.0 37 1.2514148809497739E-4 0.0 0.0 11.338507099589473 0.0 38 1.2514148809497739E-4 0.0 0.0 11.512578909529587 0.0 39 1.2514148809497739E-4 0.0 0.0 11.693721213547066 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCGTC 20 7.0341147E-4 45.0 14 CCGTAAC 20 7.0341147E-4 45.0 37 CGTACTT 20 7.0341147E-4 45.0 29 ATACGTG 20 7.0341147E-4 45.0 1 TGTACCC 25 3.8914914E-5 45.0 31 AATACGG 65 0.0 44.999996 2 TAGTACG 65 0.0 44.999996 1 TAATGCG 105 0.0 42.857143 1 AGGGTAC 745 0.0 42.583893 6 TGCGTTT 90 0.0 42.5 28 ACGTTAG 85 0.0 42.35294 1 AACGGGA 455 0.0 41.538464 4 TAACGAG 65 0.0 41.53846 1 CGTTAGG 185 0.0 41.351353 2 CTCATGC 305 0.0 41.311478 23 CGTTTTT 5000 0.0 41.085003 1 ACACGAC 615 0.0 40.97561 26 CGTAAGG 165 0.0 40.90909 2 CACGACC 615 0.0 40.609756 27 CGCATCG 50 1.0822987E-9 40.5 21 >>END_MODULE