##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546983_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3043410 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.606021863633227 31.0 31.0 33.0 30.0 34.0 2 31.99726392434802 31.0 31.0 34.0 30.0 34.0 3 32.11077508452689 33.0 31.0 34.0 30.0 34.0 4 35.795934165952005 37.0 35.0 37.0 35.0 37.0 5 35.75133912289176 37.0 35.0 37.0 33.0 37.0 6 35.804946753805766 37.0 35.0 37.0 35.0 37.0 7 36.13506921512383 37.0 35.0 37.0 35.0 37.0 8 36.07139228694129 37.0 35.0 37.0 35.0 37.0 9 37.848066149483635 39.0 38.0 39.0 35.0 39.0 10 37.22073299358286 39.0 37.0 39.0 34.0 39.0 11 37.096034711064235 39.0 37.0 39.0 33.0 39.0 12 36.816525870651674 39.0 35.0 39.0 33.0 39.0 13 36.73637268721598 39.0 35.0 39.0 33.0 39.0 14 37.82474724075954 40.0 36.0 41.0 33.0 41.0 15 37.90125352811484 40.0 36.0 41.0 33.0 41.0 16 37.944587814326695 40.0 36.0 41.0 33.0 41.0 17 37.88186540755271 40.0 36.0 41.0 33.0 41.0 18 37.812418307096316 40.0 36.0 41.0 33.0 41.0 19 37.773082167700046 40.0 36.0 41.0 33.0 41.0 20 37.65502380553392 40.0 35.0 41.0 33.0 41.0 21 37.601845298530264 40.0 35.0 41.0 33.0 41.0 22 37.52140658011901 39.0 35.0 41.0 33.0 41.0 23 37.41587561321018 39.0 35.0 41.0 32.0 41.0 24 37.32840596567666 39.0 35.0 41.0 32.0 41.0 25 37.20468126213688 39.0 35.0 41.0 32.0 41.0 26 37.08148787051367 39.0 35.0 41.0 32.0 41.0 27 36.99724453819893 39.0 35.0 41.0 31.0 41.0 28 37.03135627470502 39.0 35.0 41.0 32.0 41.0 29 37.0217069011405 39.0 35.0 41.0 32.0 41.0 30 36.95257260769991 39.0 35.0 41.0 31.0 41.0 31 36.84403415905185 39.0 35.0 41.0 31.0 41.0 32 36.75251214920106 39.0 35.0 41.0 31.0 41.0 33 36.63044939722219 39.0 35.0 41.0 31.0 41.0 34 36.4572886991894 39.0 35.0 41.0 30.0 41.0 35 36.366630522998875 39.0 35.0 41.0 30.0 41.0 36 36.260101990858935 39.0 35.0 41.0 30.0 41.0 37 36.19542914033929 39.0 35.0 41.0 30.0 41.0 38 36.08108437574957 39.0 35.0 41.0 30.0 41.0 39 35.98179016300794 39.0 35.0 41.0 29.0 41.0 40 35.86519923375424 38.0 35.0 41.0 29.0 41.0 41 35.78910136984501 38.0 35.0 41.0 28.0 41.0 42 35.710969603175386 38.0 35.0 41.0 28.0 41.0 43 35.59789085269484 38.0 35.0 41.0 28.0 41.0 44 35.460083261867446 38.0 35.0 40.0 27.0 41.0 45 35.3630861435035 38.0 34.0 40.0 27.0 41.0 46 35.306649777716444 38.0 34.0 40.0 27.0 41.0 47 35.237249006870584 38.0 34.0 40.0 27.0 41.0 48 35.13490163993678 37.0 34.0 40.0 26.0 41.0 49 35.031623080689094 37.0 34.0 40.0 26.0 41.0 50 34.9240716827506 37.0 34.0 40.0 26.0 41.0 51 34.54434532317368 36.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 1.0 13 8.0 14 29.0 15 82.0 16 191.0 17 467.0 18 1080.0 19 2078.0 20 3598.0 21 5778.0 22 8928.0 23 13091.0 24 19579.0 25 28256.0 26 38107.0 27 44893.0 28 49397.0 29 54770.0 30 63278.0 31 75986.0 32 93252.0 33 119185.0 34 197658.0 35 294470.0 36 224205.0 37 295681.0 38 463188.0 39 945622.0 40 549.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.87998659398504 24.306748022777082 27.867917894729928 12.945347488507958 2 32.51898364006164 25.40567981310438 27.97365455196638 14.101681994867599 3 29.778110737626545 25.34676563460066 30.65830762204238 14.216816005730415 4 25.427431729540217 28.35947177672414 30.57859440561738 15.634502088118262 5 23.658724917115997 32.503737583828666 28.771641021091472 15.065896477963864 6 22.402469598246704 41.27281569029477 25.47096842029171 10.853746291166816 7 89.29559277258076 2.9768581952480933 6.269776336412117 1.4577726957590333 8 89.2714093730388 2.315527648262968 6.066320344613444 2.346742634084793 9 83.58147604167694 3.871348257382344 9.389730598243418 3.157445102697303 10 36.88421868890488 23.07441324041125 24.94553806421087 15.095830006473001 11 32.47682698026227 25.752856171202698 23.55873838884672 18.21157845968831 12 28.639158049687687 23.97333911632018 26.9732306853168 20.414272148675337 13 24.435156617084125 27.048606661606556 29.523987895157077 18.992248826152245 14 22.039291452679723 28.16689174314338 29.90320068607253 19.89061611810436 15 22.77244932493486 23.781974824292487 34.50668822143582 18.93888762933683 16 24.850545933673086 22.517373603950833 33.14571483960426 19.486365622771824 17 23.774286080416378 23.094095110418905 29.312350291285107 23.819268517879618 18 25.102697303353803 23.387187398345937 30.505847059712625 21.00426823858764 19 26.593492168324346 25.55327740922189 27.199325756306248 20.65390466614751 20 28.02425568687755 25.65217962745736 26.21703943931314 20.106525246351953 21 26.53148934911826 26.286369565717404 28.03585451845134 19.146286566712998 22 25.166605879589017 23.15941657548605 28.37751075274117 23.296466792183768 23 23.662273568135742 26.887274471727434 27.38155555774608 22.068896402390738 24 23.082529136724926 25.471494146368713 31.024377261032853 20.42159945587351 25 23.54638382603724 25.45522949586155 29.35628127659435 21.64210540150686 26 22.133396420462574 27.638044167562043 28.045186156318074 22.183373255657305 27 22.49654170814974 26.3101258128218 28.53089133570567 22.662441143322788 28 21.627779365908637 27.588363053285626 29.77981934737679 21.00403823342895 29 22.528545283087066 25.73954872987866 29.547448421343166 22.184457565691115 30 24.41839909837978 25.660558386809534 29.158213977084912 20.762828537725774 31 25.89430934379528 25.979509826148956 26.918325168150197 21.20785566190556 32 26.59930801305115 25.825767806506516 26.679809818591643 20.895114361850688 33 25.63752501306101 25.710009495927267 26.744934136379918 21.90753135463181 34 22.743107238262343 28.04278753109177 28.414377293890738 20.799727936755154 35 22.766107754131056 26.99159824013196 28.58993694572864 21.652357060008345 36 25.853466999188413 27.960314252762526 26.009311923138846 20.176906824910215 37 23.228220975813315 27.90948311269267 27.592963156459366 21.269332755034647 38 23.936965443367804 27.884543981915023 27.05806973099254 21.120420843724638 39 23.588737633115485 27.07403866058139 26.73376245724368 22.603461249059443 40 24.77839002960495 25.54279574556172 27.46869465500869 22.210119569824638 41 21.44926250488761 25.741290197508714 27.92666778383458 24.882779513769094 42 23.820714264591363 26.081402111447353 27.09559342973835 23.002290194222926 43 22.927407086130362 24.71944299322142 28.774893951192904 23.578255969455313 44 22.642857846954566 26.810255601447057 27.859604851137377 22.687281700460996 45 22.118150364229596 26.424701239727806 27.502571129095326 23.954577266947272 46 23.749018370840602 26.042826960547544 27.415596321231778 22.792558347380076 47 23.11147692883969 25.809174577201233 28.523038302430496 22.55631019152858 48 23.623698417235932 25.601381345267317 28.68929917428148 22.085621063215275 49 23.385347357076437 25.20363671013764 28.641753822192868 22.769262110593054 50 22.49535882447649 26.324418990540217 28.5370357592306 22.643186425752692 51 22.18800621671086 26.671693922277974 27.437085374629117 23.703214486382052 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1156.0 1 2139.0 2 3122.0 3 15423.5 4 27725.0 5 19490.0 6 11255.0 7 11193.0 8 11131.0 9 11782.5 10 12434.0 11 12524.5 12 12615.0 13 12841.5 14 13068.0 15 12566.5 16 12065.0 17 12103.5 18 12142.0 19 11903.0 20 11664.0 21 11951.0 22 12238.0 23 12743.5 24 13249.0 25 14787.0 26 20087.5 27 23850.0 28 28624.0 29 33398.0 30 39413.5 31 45429.0 32 50856.5 33 56284.0 34 67307.0 35 78330.0 36 83663.0 37 88996.0 38 100142.5 39 111289.0 40 130515.0 41 149741.0 42 163575.0 43 177409.0 44 190395.5 45 203382.0 46 220158.0 47 236934.0 48 246488.0 49 256042.0 50 250282.0 51 244522.0 52 232061.5 53 219601.0 54 205546.0 55 191491.0 56 177246.0 57 163001.0 58 151368.0 59 139735.0 60 129437.0 61 119139.0 62 108988.0 63 98837.0 64 87435.0 65 76033.0 66 63930.0 67 51827.0 68 43260.0 69 34693.0 70 29436.5 71 24180.0 72 20275.5 73 16371.0 74 15202.5 75 12089.0 76 10144.0 77 7323.0 78 4502.0 79 3559.0 80 2616.0 81 1632.5 82 649.0 83 510.0 84 371.0 85 281.5 86 192.0 87 134.5 88 77.0 89 74.5 90 72.0 91 55.5 92 39.0 93 22.5 94 6.0 95 4.5 96 3.0 97 1.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3043410.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.2026008135222 #Duplication Level Percentage of deduplicated Percentage of total 1 77.5428248566501 16.441095613884187 2 7.090227367201249 3.006625210877571 3 2.397769374387883 1.5251684066410542 4 1.304472874684238 1.1063287053599067 5 0.8945239579620342 0.948311719940046 6 0.6799051753844014 0.8649454814833958 7 0.5299724451019813 0.786575593696453 8 0.4431013732423581 0.7515921229424981 9 0.38803681854909344 0.7404650788181019 >10 6.202889654064432 33.573319301241526 >50 2.335246760556335 33.794100532949464 >100 0.18788306460990412 5.292058761832324 >500 0.0017304526833594215 0.2577646120575387 >1k 0.0012585110424432157 0.40245701463331546 >5k 0.0 0.0 >10k+ 1.5731388030540197E-4 0.5091918436426481 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15266 0.5016083932168193 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.571575962489444E-5 0.0 0.0 0.055299811724348676 0.0 2 6.571575962489444E-5 0.0 0.0 0.16511084605754728 0.0 3 6.571575962489444E-5 0.0 0.0 0.25441856338777885 0.0 4 6.571575962489444E-5 0.0 0.0 0.4524201471375858 0.0 5 6.571575962489444E-5 0.0 0.0 0.7669357727023306 0.0 6 6.571575962489444E-5 0.0 0.0 1.4189675397005332 0.0 7 6.571575962489444E-5 0.0 0.0 1.7368346690061478 0.0 8 6.571575962489444E-5 0.0 0.0 2.606812752800313 0.0 9 6.571575962489444E-5 0.0 0.0 3.0326508751696286 0.0 10 6.571575962489444E-5 0.0 0.0 3.6957886055444384 0.0 11 6.571575962489444E-5 0.0 0.0 4.196444120246697 0.0 12 9.857363943734167E-5 0.0 0.0 4.589687225842066 0.0 13 9.857363943734167E-5 0.0 0.0 4.800700529997601 0.0 14 9.857363943734167E-5 0.0 0.0 4.9077843603063664 0.0 15 9.857363943734167E-5 0.0 0.0 5.018811136192626 0.0 16 9.857363943734167E-5 0.0 0.0 5.233044512569782 0.0 17 9.857363943734167E-5 0.0 0.0 5.463181102776162 0.0 18 9.857363943734167E-5 0.0 0.0 5.762089235429995 0.0 19 9.857363943734167E-5 0.0 0.0 5.919445621851804 0.0 20 9.857363943734167E-5 0.0 0.0 6.094512405492523 0.0 21 9.857363943734167E-5 0.0 0.0 6.308285771552304 0.0 22 9.857363943734167E-5 0.0 0.0 6.534085121623442 0.0 23 9.857363943734167E-5 0.0 0.0 6.780420646577359 0.0 24 9.857363943734167E-5 0.0 0.0 6.976516473298044 0.0 25 9.857363943734167E-5 0.0 0.0 7.162262067877808 0.0 26 9.857363943734167E-5 0.0 0.0 7.329442960363539 0.0 27 9.857363943734167E-5 0.0 0.0 7.501519676941325 0.0 28 9.857363943734167E-5 0.0 0.0 7.6758635872261705 0.0 29 9.857363943734167E-5 0.0 0.0 7.869823651759047 0.0 30 9.857363943734167E-5 0.0 0.0 8.144055516673731 0.0 31 9.857363943734167E-5 0.0 0.0 8.35792745637295 0.0 32 9.857363943734167E-5 0.0 0.0 8.583693948564274 0.0 33 9.857363943734167E-5 0.0 0.0 8.795134405157373 0.0 34 9.857363943734167E-5 0.0 0.0 9.011076391284776 0.0 35 9.857363943734167E-5 0.0 0.0 9.250051751160704 0.0 36 9.857363943734167E-5 0.0 0.0 9.462576517787614 0.0 37 9.857363943734167E-5 0.0 0.0 9.681837149776074 0.0 38 9.857363943734167E-5 0.0 0.0 9.939377211746034 0.0 39 9.857363943734167E-5 0.0 0.0 10.311065548184438 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTACG 120 0.0 41.249996 1 CGTTTTT 10125 0.0 41.244446 1 CGTTAGG 425 0.0 40.764706 2 TCGTTAG 145 0.0 40.344826 1 CGTAAGG 605 0.0 39.421486 2 GACCGAT 2075 0.0 38.710842 9 GGGCGAT 7730 0.0 38.33441 7 AGGGCGA 3895 0.0 38.1258 6 TAATGCG 150 0.0 37.5 1 CTTAACG 60 1.5643309E-10 37.499996 1 TACGGGA 475 0.0 37.42105 4 TAGGGTC 2015 0.0 37.183624 5 TAAGGGT 2535 0.0 37.100594 4 AACACGT 2475 0.0 37.090908 41 CACGACC 2645 0.0 37.00378 27 GCGAGAC 2730 0.0 36.675823 21 CGAGGGT 1425 0.0 36.631577 4 GGCGATG 3860 0.0 36.606216 8 ACACGAC 2675 0.0 36.588783 26 TGGGCGA 2300 0.0 36.489132 6 >>END_MODULE