##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546981_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1625466 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.62118924665296 31.0 31.0 33.0 30.0 34.0 2 32.00541998417685 31.0 31.0 34.0 30.0 34.0 3 32.061870257513846 33.0 31.0 34.0 30.0 34.0 4 35.77483564713135 37.0 35.0 37.0 35.0 37.0 5 35.74352585658513 37.0 35.0 37.0 33.0 37.0 6 35.79494188128204 37.0 35.0 37.0 35.0 37.0 7 36.125682727291746 37.0 35.0 37.0 35.0 37.0 8 36.06407577888433 37.0 35.0 37.0 35.0 37.0 9 37.83255263413692 39.0 38.0 39.0 35.0 39.0 10 37.31957912377128 39.0 37.0 39.0 34.0 39.0 11 37.10731384107696 39.0 37.0 39.0 33.0 39.0 12 36.774677538625845 39.0 35.0 39.0 33.0 39.0 13 36.70750357128356 39.0 35.0 39.0 33.0 39.0 14 37.83201002051104 40.0 36.0 41.0 33.0 41.0 15 37.897435566169946 40.0 36.0 41.0 33.0 41.0 16 37.95250100586539 40.0 36.0 41.0 33.0 41.0 17 37.89030714884224 40.0 36.0 41.0 33.0 41.0 18 37.77602484456765 39.0 36.0 41.0 33.0 41.0 19 37.682499664711536 39.0 36.0 41.0 33.0 41.0 20 37.525467773549245 39.0 35.0 41.0 33.0 41.0 21 37.46915223080643 39.0 35.0 41.0 33.0 41.0 22 37.37664952696642 39.0 35.0 41.0 32.0 41.0 23 37.27253415328281 39.0 35.0 41.0 32.0 41.0 24 37.156630160212515 39.0 35.0 41.0 32.0 41.0 25 37.04155054612031 39.0 35.0 41.0 32.0 41.0 26 36.88267549121298 39.0 35.0 41.0 31.0 41.0 27 36.79090180908121 39.0 35.0 41.0 31.0 41.0 28 36.8103682267116 39.0 35.0 41.0 31.0 41.0 29 36.79342908433643 39.0 35.0 41.0 31.0 41.0 30 36.68850532708774 39.0 35.0 41.0 31.0 41.0 31 36.55122346453263 39.0 35.0 41.0 31.0 41.0 32 36.417985980635706 39.0 35.0 41.0 30.0 41.0 33 36.21702760931327 39.0 35.0 41.0 30.0 41.0 34 35.96303337012278 39.0 35.0 41.0 29.0 41.0 35 35.80969149769974 38.0 35.0 41.0 28.0 41.0 36 35.67690988307353 38.0 35.0 41.0 27.0 41.0 37 35.60271392942086 38.0 35.0 41.0 27.0 41.0 38 35.49019296620169 38.0 35.0 41.0 27.0 41.0 39 35.37317360067821 38.0 35.0 41.0 26.0 41.0 40 35.249198691329134 38.0 35.0 41.0 26.0 41.0 41 35.17230812579285 38.0 34.0 40.0 25.0 41.0 42 35.067584926414945 38.0 34.0 40.0 25.0 41.0 43 34.944725389519064 38.0 34.0 40.0 24.0 41.0 44 34.79209039130932 37.0 34.0 40.0 24.0 41.0 45 34.66767499289435 37.0 34.0 40.0 23.0 41.0 46 34.605002503897346 37.0 34.0 40.0 23.0 41.0 47 34.52983821254951 37.0 34.0 40.0 23.0 41.0 48 34.417264341425785 37.0 34.0 40.0 23.0 41.0 49 34.31965479437896 36.0 34.0 40.0 23.0 41.0 50 34.20056033162182 36.0 34.0 40.0 23.0 41.0 51 33.811546965608635 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 1.0 13 5.0 14 17.0 15 49.0 16 137.0 17 281.0 18 668.0 19 1315.0 20 2276.0 21 3594.0 22 5649.0 23 8529.0 24 12689.0 25 19453.0 26 26170.0 27 29273.0 28 30039.0 29 31707.0 30 35907.0 31 41922.0 32 50866.0 33 66091.0 34 108743.0 35 161503.0 36 125317.0 37 163135.0 38 242951.0 39 456864.0 40 311.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.76566104735503 23.570225399977605 26.104206424496113 15.559907128171243 2 34.835302614757865 24.839399901320604 27.157442850234947 13.167854633686584 3 29.54020570101128 25.277182051177938 31.431847851631474 13.75076439617931 4 25.163614618823154 28.2682012419823 31.324678584479777 15.24350555471477 5 23.174031323940333 31.97655318536346 30.018653112399768 14.83076237829644 6 21.831031839484798 40.62176631193763 27.326317499104874 10.220884349472705 7 86.55813163732738 3.410345094883559 8.40036026591759 1.6311630018714633 8 86.37043161776377 2.979514797602657 8.284947208984992 2.3651063756485833 9 81.11181654983864 4.672506222830868 10.742457855162765 3.473219372167735 10 41.71819035279729 24.952721250398348 19.143248766815177 14.185839629989186 11 32.990908453329695 26.87906114308143 23.39698277294019 16.733047630648688 12 27.763915086504426 22.900509761508392 29.630333701227833 19.70524145075935 13 23.75177333761518 27.075435598160773 30.943803192438352 18.22898787178569 14 21.8531178135993 28.33716608037326 30.796460830309584 19.013255275717857 15 20.799696825402684 23.982845534757416 36.005920763645626 19.211536876194273 16 23.273325926226697 22.594505206506934 34.51933168703621 19.612837180230162 17 23.2185723970849 23.28255404911576 29.844795277169744 23.654078276629594 18 24.727616572724376 22.639723008663363 31.3425196220653 21.29014079654696 19 26.298304609262818 25.7380960290772 27.236004936430536 20.72759442522944 20 27.95229183507991 24.341634952684338 27.28743634133227 20.418636870903484 21 26.41162595834056 25.803677222408833 28.085853533694337 19.698843285556265 22 25.634248886165565 23.138410769588535 27.726448907574813 23.500891436671083 23 23.776566227777142 26.663184588296524 27.238219685923916 22.32202949800242 24 23.146654559369438 24.294263921853794 31.553536032128633 21.005545486648135 25 23.302179190459842 25.11452100505332 29.724152950600015 21.859146853886823 26 22.403236979426207 26.929754298152037 28.298592526696957 22.368416195724794 27 22.642552966349342 25.54621259380387 28.805893202318593 23.005341237528192 28 22.05890495402549 26.471116590565412 30.359416930283377 21.110561525125718 29 22.784419975563928 24.413921915315363 30.122746338588442 22.678911770532263 30 23.803020180059136 24.91716221686581 30.061656165062818 21.21816143801224 31 25.505178207357154 25.112306255559947 27.59510195845376 21.787413578629145 32 26.484528129164193 24.523244411141174 26.99908826145856 21.993139198236076 33 25.917675300498445 24.77646410321717 27.069591120331033 22.236269475953357 34 23.20614519159429 25.975997037157345 28.789590185214582 22.028267586033788 35 23.54204886475632 25.975627912241784 28.818074324532166 21.664248898469733 36 26.161851432143152 26.498370313497794 26.285200674760347 21.054577579598714 37 23.916464570775396 27.439823410640397 27.129758481567745 21.513953537016462 38 24.494698751004325 27.33025483153754 26.921325945913356 21.253720471544778 39 23.962912789317034 27.02012838164563 26.342168953395518 22.674789875641814 40 25.70081441260537 25.296376546787197 27.109518132031063 21.893290908576372 41 22.3110172713548 25.287394507175172 27.921346862991903 24.48024135847812 42 24.45913971747179 26.05302110287142 26.335217100819087 23.1526220788377 43 23.74174544407573 25.476324943124002 27.540471470950482 23.241458141849783 44 23.268957948059203 26.485327899814575 27.21564154525533 23.030072606870892 45 22.306280168271744 26.988875805461326 27.04578256327724 23.65906146298969 46 24.250030452805536 26.280525092496553 27.055933498455214 22.413510956242703 47 22.935515107667587 26.36185561555886 27.953706813922903 22.748922462850654 48 23.63660636395963 25.514652413523258 28.437321974129265 22.411419248387848 49 23.59255745736915 24.868253165553757 28.068935308397712 23.470254068679385 50 22.394501023091223 26.43297368262394 28.595922646182693 22.576602648102146 51 22.35801917726978 26.67776502246125 27.15830414170459 23.805911658564373 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 969.0 1 1422.0 2 1875.0 3 11185.5 4 20496.0 5 14284.5 6 8073.0 7 8142.0 8 8211.0 9 8673.5 10 9136.0 11 9280.0 12 9424.0 13 9455.0 14 9486.0 15 9443.5 16 9401.0 17 9162.0 18 8923.0 19 8692.0 20 8461.0 21 8601.0 22 8741.0 23 9111.5 24 9482.0 25 10483.0 26 12367.0 27 13250.0 28 15362.5 29 17475.0 30 19751.0 31 22027.0 32 24437.5 33 26848.0 34 30136.5 35 33425.0 36 38850.5 37 44276.0 38 48758.5 39 53241.0 40 61927.5 41 70614.0 42 79934.5 43 89255.0 44 95445.5 45 101636.0 46 108315.5 47 114995.0 48 121128.0 49 127261.0 50 126847.0 51 126433.0 52 117210.0 53 107987.0 54 103700.5 55 99414.0 56 92531.5 57 85649.0 58 81929.0 59 78209.0 60 73708.0 61 69207.0 62 62981.5 63 56756.0 64 52203.0 65 47650.0 66 41186.0 67 34722.0 68 29805.0 69 24888.0 70 21549.0 71 18210.0 72 16134.0 73 14058.0 74 11996.5 75 8425.5 76 6916.0 77 5256.0 78 3596.0 79 2740.5 80 1885.0 81 1317.5 82 750.0 83 602.5 84 455.0 85 306.0 86 157.0 87 108.5 88 60.0 89 52.5 90 45.0 91 27.5 92 10.0 93 8.0 94 6.0 95 4.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1625466.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.742395210982124 #Duplication Level Percentage of deduplicated Percentage of total 1 75.05140089785114 20.821056248460447 2 6.8308499416562904 3.7900827741668595 3 2.9013667758382904 2.4147259124195646 4 1.7873326007747308 1.9833954953666046 5 1.3352347566509302 1.8521305159224823 6 1.046144238490868 1.7413528147143353 7 0.8317427968975811 1.6152176169794232 8 0.741275390486686 1.6451803874445392 9 0.6475599587297736 1.6168377868099788 >10 8.392374203695294 53.168931507393246 >50 0.40313122759503645 6.7564813322154835 >100 0.029346984515355477 1.423902039939933 >500 0.0020162041361709887 0.39502068223549963 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 2.2402268179677652E-4 0.7756848859316033 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12481 0.7678413451896255 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.152081926044592E-5 0.0 0.0 0.05875238239372586 0.0 2 6.152081926044592E-5 0.0 0.0 0.15355596487407303 0.0 3 6.152081926044592E-5 0.0 0.0 0.2622017316880205 0.0 4 6.152081926044592E-5 0.0 0.0 0.41680355048952117 0.0 5 6.152081926044592E-5 0.0 0.0 0.7011527771113022 0.0 6 6.152081926044592E-5 0.0 0.0 1.3557958148617073 0.0 7 6.152081926044592E-5 0.0 0.0 1.6704132845596278 0.0 8 6.152081926044592E-5 0.0 0.0 2.441515233170057 0.0 9 6.152081926044592E-5 0.0 0.0 2.8965232124203153 0.0 10 6.152081926044592E-5 0.0 0.0 3.5373855866563804 0.0 11 6.152081926044592E-5 0.0 0.0 4.025553287488019 0.0 12 6.152081926044592E-5 0.0 0.0 4.449001086457669 0.0 13 6.152081926044592E-5 0.0 0.0 4.717539462529515 0.0 14 6.152081926044592E-5 0.0 0.0 4.867342657428701 0.0 15 6.152081926044592E-5 0.0 0.0 4.992476003804447 0.0 16 1.2304163852089184E-4 0.0 0.0 5.189465667076395 0.0 17 1.2304163852089184E-4 0.0 0.0 5.3922382873588255 0.0 18 1.2304163852089184E-4 0.0 0.0 5.666682662079674 0.0 19 1.2304163852089184E-4 0.0 0.0 5.8305126037702415 0.0 20 1.2304163852089184E-4 0.0 0.0 6.012060541407818 0.0 21 1.2304163852089184E-4 0.0 0.0 6.223630638844491 0.0 22 1.2304163852089184E-4 0.0 0.0 6.4510115868310995 0.0 23 1.2304163852089184E-4 0.0 0.0 6.703739112353011 0.0 24 1.2304163852089184E-4 0.0 0.0 6.910756669164412 0.0 25 1.2304163852089184E-4 0.0 0.0 7.098210605450991 0.0 26 1.2304163852089184E-4 0.0 0.0 7.269423045452812 0.0 27 1.2304163852089184E-4 0.0 0.0 7.440450922996852 0.0 28 1.2304163852089184E-4 0.0 0.0 7.6215066940803435 0.0 29 1.2304163852089184E-4 0.0 0.0 7.820649586026407 0.0 30 1.2304163852089184E-4 0.0 0.0 8.11078176965867 0.0 31 1.2304163852089184E-4 0.0 0.0 8.332502802273318 0.0 32 1.8456245778133778E-4 0.0 0.0 8.587629639746387 0.0 33 1.8456245778133778E-4 0.0 0.0 8.805167256651323 0.0 34 1.8456245778133778E-4 0.0 0.0 9.020613165701405 0.0 35 1.8456245778133778E-4 0.0 0.0 9.247809551230231 0.0 36 1.8456245778133778E-4 0.0 0.0 9.462455689629927 0.0 37 1.8456245778133778E-4 0.0 0.0 9.687621888123159 0.0 38 2.460832770417837E-4 0.0 0.0 9.925461375384044 0.0 39 2.460832770417837E-4 0.0 0.0 10.234665012987046 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGTA 20 7.03415E-4 45.0 1 CGTTTTT 8520 0.0 42.359158 1 GCGATAT 205 0.0 39.512196 9 CATACGA 280 0.0 39.375 18 TAATACG 35 6.2498875E-6 38.571426 1 TATCGCG 35 6.2498875E-6 38.571426 1 TAGGGTA 940 0.0 38.29787 5 AGGGCGA 2055 0.0 38.211678 6 GGGCGAT 3770 0.0 38.136604 7 AACACGT 950 0.0 37.894737 41 GTTCGAC 30 1.14012975E-4 37.500004 33 TTACGGG 425 0.0 37.058826 3 TAGGGCA 1070 0.0 37.009346 5 TGGGCGA 940 0.0 36.62234 6 GGCGATT 1040 0.0 36.346153 8 ACACGAC 1120 0.0 36.160713 26 TAACGCG 25 0.002107365 36.0 1 CCGTATA 25 0.002107365 36.0 45 TACGAAT 125 0.0 36.0 12 AACGGGA 370 0.0 35.87838 4 >>END_MODULE