##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546973_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 146621 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.617387686620607 31.0 31.0 33.0 30.0 34.0 2 32.01375655601858 31.0 31.0 34.0 30.0 34.0 3 32.12683039946529 33.0 31.0 34.0 30.0 34.0 4 35.819575640597186 37.0 35.0 37.0 35.0 37.0 5 35.77659407588272 37.0 35.0 37.0 35.0 37.0 6 35.80626240443047 37.0 35.0 37.0 35.0 37.0 7 36.082668921914326 37.0 35.0 37.0 35.0 37.0 8 36.01185369080827 37.0 35.0 37.0 35.0 37.0 9 37.79466106492249 39.0 38.0 39.0 35.0 39.0 10 37.35181863443845 39.0 37.0 39.0 34.0 39.0 11 37.101465683633315 39.0 37.0 39.0 33.0 39.0 12 36.61477550964732 39.0 35.0 39.0 33.0 39.0 13 36.45654442405931 39.0 35.0 39.0 32.0 39.0 14 37.52866233349929 40.0 35.0 41.0 33.0 41.0 15 37.64576697744525 40.0 35.0 41.0 33.0 41.0 16 37.751918210897486 40.0 35.0 41.0 33.0 41.0 17 37.71442017173529 40.0 35.0 41.0 33.0 41.0 18 37.64380954979164 39.0 36.0 41.0 33.0 41.0 19 37.56393695309676 39.0 35.0 41.0 33.0 41.0 20 37.41494056103832 39.0 35.0 41.0 33.0 41.0 21 37.33704585291329 39.0 35.0 41.0 32.0 41.0 22 37.27871860101895 39.0 35.0 41.0 32.0 41.0 23 37.17202856343907 39.0 35.0 41.0 32.0 41.0 24 37.051902524195036 39.0 35.0 41.0 32.0 41.0 25 36.9348592629978 39.0 35.0 41.0 32.0 41.0 26 36.80068339460241 38.0 35.0 41.0 31.0 41.0 27 36.68075514421536 38.0 35.0 41.0 31.0 41.0 28 36.71347896958826 38.0 35.0 41.0 31.0 41.0 29 36.71695732534903 38.0 35.0 41.0 31.0 41.0 30 36.62150033078481 38.0 35.0 41.0 31.0 41.0 31 36.5167472599423 38.0 35.0 41.0 31.0 41.0 32 36.43686102263659 38.0 35.0 41.0 31.0 41.0 33 36.316025671629575 38.0 35.0 41.0 30.0 41.0 34 36.14036188540523 38.0 35.0 41.0 30.0 41.0 35 36.01625960810525 38.0 35.0 41.0 30.0 41.0 36 35.87660021415759 38.0 35.0 41.0 29.0 41.0 37 35.79039155373378 38.0 35.0 41.0 29.0 41.0 38 35.65902565116866 38.0 35.0 41.0 29.0 41.0 39 35.55444990826689 38.0 35.0 40.0 28.0 41.0 40 35.36312670081366 38.0 35.0 40.0 27.0 41.0 41 35.26989312581417 37.0 34.0 40.0 27.0 41.0 42 35.17217178985275 37.0 34.0 40.0 27.0 41.0 43 35.0532734055831 37.0 34.0 40.0 27.0 41.0 44 34.842444124647905 37.0 34.0 40.0 26.0 41.0 45 34.742860845308655 36.0 34.0 40.0 26.0 41.0 46 34.71030752757108 36.0 34.0 40.0 26.0 41.0 47 34.66884689096378 36.0 34.0 40.0 26.0 41.0 48 34.56345271141242 36.0 34.0 40.0 26.0 41.0 49 34.47752368351055 36.0 34.0 40.0 26.0 41.0 50 34.377019662940505 35.0 34.0 40.0 26.0 41.0 51 34.00322600446048 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 0.0 15 4.0 16 8.0 17 31.0 18 66.0 19 142.0 20 193.0 21 326.0 22 489.0 23 709.0 24 977.0 25 1410.0 26 1816.0 27 2244.0 28 2482.0 29 2841.0 30 3299.0 31 3885.0 32 4781.0 33 6247.0 34 11029.0 35 17488.0 36 11195.0 37 14985.0 38 21495.0 39 38448.0 40 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.300536758036024 24.39759652437236 27.36920359293689 12.932663124654722 2 33.023918811084364 25.441103252603654 27.58949945778572 13.945478478526269 3 30.858471842369102 25.54545392542678 29.8640713131134 13.732002919090716 4 25.62934368201008 29.238649306715953 29.377783537146797 15.754223474127171 5 23.937225908976203 32.56900444001882 28.442719664986598 15.051049986018375 6 22.631137422333772 41.9967126127908 25.353803343313714 10.018346621561713 7 88.7185328158995 3.6290845104043763 6.027785924253688 1.62459674944244 8 88.57871655492733 3.00366250400693 6.208524017705512 2.209096923360228 9 83.425975815197 5.1240954569945645 8.166633701857169 3.283295025951262 10 47.628238792533125 25.139645753336836 14.289221871355398 12.942893582774637 11 37.203401968340145 25.101452043022487 20.971757115283623 16.72338887335375 12 31.78603337857469 22.226693311326482 26.91019703862339 19.077076271475438 13 24.35735672243403 28.60640699490523 29.03267608323501 18.00356019942573 14 21.812700772740605 29.83269790821233 29.776771403823467 18.577829915223603 15 20.33133043697697 22.840520798521357 37.445522810511456 19.38262595399022 16 23.101738495849844 20.618465294875904 35.08910729022446 21.190688919049794 17 23.36909446805028 21.18386861363652 28.2947190375185 27.1523178807947 18 25.322429938412643 22.48995710027895 30.111648399615337 22.075964561693073 19 28.665743652000735 24.340987989442166 25.475204779670037 21.518063578887062 20 29.9677399553952 23.69237694463958 24.840234345694 21.499648754271217 21 26.930657954863218 25.29787683892485 26.874731450474354 20.896733755737582 22 26.532352118727875 22.870530142339774 25.868054371474752 24.729063367457595 23 24.960271720967665 25.87214655472272 25.259001098069174 23.908580626240443 24 23.414108483777905 24.280287271264005 31.054214607730135 21.251389637227955 25 23.942682153306823 24.08386247536165 29.270704742158355 22.702750629173174 26 22.0889231419783 27.693850130608848 26.45255454539254 23.76467218202031 27 22.774363836012576 26.52894196602124 27.044557055264935 23.65213714270125 28 21.69743761125623 26.464831095136443 30.33330832554682 21.50442296806051 29 23.101738495849844 24.294609912631888 29.498502942961785 23.10514864855648 30 24.212766247672572 25.48202508508331 28.37178848868852 21.933420178555597 31 26.567135676335585 25.859187974437496 24.73588367287087 22.83779267635605 32 28.024634943152755 25.273323739437053 24.60015959514667 22.10188172226352 33 26.873367389391696 25.42337045852913 24.653357977370227 23.049904174708942 34 23.465942804918804 26.95043684056172 26.38366946071845 23.199950893801024 35 24.523772174517973 26.257493810572836 27.01727583361183 22.201458181297358 36 28.20537303660458 26.257493810572836 23.786497159342794 21.75063599347979 37 25.115092653849043 27.813205475341185 25.092585645985228 21.979116224824548 38 25.22830972370943 27.894367109759177 24.113871819180062 22.763451347351335 39 24.64653767195695 27.30918490530006 24.7563445891107 23.28793283363229 40 26.258175841114166 24.60902599218393 25.20102850205632 23.931769664645582 41 23.125609564796314 24.080452322655006 26.331835139577553 26.46210297297113 42 24.95345141555439 25.19011601339508 24.745432100449456 25.111000470601073 43 23.928359511938947 24.724289153668302 26.94293450460712 24.40441682978564 44 23.81105025883059 26.127908007720585 26.824261190416106 23.23678054303272 45 22.217144883747896 27.25666855361783 25.684588155857618 24.841598406776654 46 23.908580626240443 26.104718969315442 27.03773674985166 22.948963654592454 47 24.238001377701693 25.381084564966823 27.371931715102203 23.008982342229285 48 24.54286902967515 24.34985438647943 27.76546333744825 23.341813246397177 49 24.313024737247733 23.86902285484344 28.087381752954897 23.73057065495393 50 22.884852783707654 26.83517367907735 26.974989940049515 23.30498359716548 51 22.999433914650698 27.426494158408417 25.612292918476893 23.961779008464 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 86.0 1 149.5 2 213.0 3 693.0 4 1173.0 5 847.0 6 521.0 7 532.5 8 544.0 9 581.0 10 618.0 11 623.0 12 628.0 13 631.0 14 634.0 15 651.5 16 669.0 17 611.0 18 553.0 19 579.0 20 605.0 21 618.5 22 632.0 23 645.0 24 658.0 25 706.0 26 953.0 27 1152.0 28 1327.5 29 1503.0 30 1703.0 31 1903.0 32 2173.0 33 2443.0 34 2679.5 35 2916.0 36 3182.0 37 3448.0 38 4023.0 39 4598.0 40 5373.5 41 6149.0 42 7430.5 43 8712.0 44 8773.0 45 8834.0 46 9061.5 47 9289.0 48 9604.0 49 9919.0 50 10339.0 51 10759.0 52 10625.0 53 10491.0 54 9823.5 55 9156.0 56 8601.5 57 8047.0 58 7686.0 59 7325.0 60 7165.5 61 7006.0 62 6622.0 63 6238.0 64 5727.0 65 5216.0 66 4634.0 67 4052.0 68 3464.0 69 2876.0 70 2530.0 71 2184.0 72 1853.0 73 1522.0 74 1300.5 75 889.5 76 700.0 77 563.5 78 427.0 79 312.0 80 197.0 81 148.0 82 99.0 83 75.0 84 51.0 85 33.0 86 15.0 87 14.5 88 14.0 89 12.5 90 11.0 91 6.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 146621.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.898070535598585 #Duplication Level Percentage of deduplicated Percentage of total 1 63.61233480176212 28.56071094863628 2 10.659273887285432 9.571616616992108 3 7.156311711985416 9.639137640583545 4 5.307610511924654 9.532058845595106 5 4.033115600789913 9.05395543612443 6 2.9895184566307154 8.05341663199678 7 2.196566914780495 6.903513139318379 8 1.4339966580586359 5.1506946481063425 9 0.9585295457997873 3.8732514441996715 >10 1.6390703326750724 8.803650227457185 >50 0.010633449794926326 0.3573840036556837 >100 0.0015190642564180466 0.07638742062869576 >500 0.0015190642564180466 0.4242229967057925 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 622 0.4242229967057925 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.820305413276406E-4 0.0 0.0 0.05797259601284946 0.0 2 6.820305413276406E-4 0.0 0.0 0.13504204718287285 0.0 3 6.820305413276406E-4 0.0 0.0 0.2059732234809475 0.0 4 6.820305413276406E-4 0.0 0.0 0.3723886755648918 0.0 5 6.820305413276406E-4 0.0 0.0 0.6083712428642555 0.0 6 6.820305413276406E-4 0.0 0.0 1.0537371863512048 0.0 7 6.820305413276406E-4 0.0 0.0 1.2713049290347223 0.0 8 6.820305413276406E-4 0.0 0.0 1.838754339419319 0.0 9 6.820305413276406E-4 0.0 0.0 2.142939960851447 0.0 10 6.820305413276406E-4 0.0 0.0 2.6940206382441807 0.0 11 6.820305413276406E-4 0.0 0.0 3.0786858635529697 0.0 12 6.820305413276406E-4 0.0 0.0 3.4074245844728925 0.0 13 6.820305413276406E-4 0.0 0.0 3.5765681587221474 0.0 14 6.820305413276406E-4 0.0 0.0 3.6638680680120856 0.0 15 6.820305413276406E-4 0.0 0.0 3.765490618669904 0.0 16 6.820305413276406E-4 0.0 0.0 3.957141200782971 0.0 17 6.820305413276406E-4 0.0 0.0 4.139925385858779 0.0 18 6.820305413276406E-4 0.0 0.0 4.384092319654074 0.0 19 6.820305413276406E-4 0.0 0.0 4.502765633845083 0.0 20 6.820305413276406E-4 0.0 0.0 4.624167070201404 0.0 21 6.820305413276406E-4 0.0 0.0 4.779670033624106 0.0 22 6.820305413276406E-4 0.0 0.0 4.945403455166723 0.0 23 6.820305413276406E-4 0.0 0.0 5.117957182122615 0.0 24 6.820305413276406E-4 0.0 0.0 5.274142176086645 0.0 25 6.820305413276406E-4 0.0 0.0 5.392815490277655 0.0 26 6.820305413276406E-4 0.0 0.0 5.503304437972733 0.0 27 6.820305413276406E-4 0.0 0.0 5.634936332448967 0.0 28 6.820305413276406E-4 0.0 0.0 5.7467893412267 0.0 29 6.820305413276406E-4 0.0 0.0 5.875011082996297 0.0 30 6.820305413276406E-4 0.0 0.0 6.066661665109364 0.0 31 6.820305413276406E-4 0.0 0.0 6.226938842321359 0.0 32 6.820305413276406E-4 0.0 0.0 6.393354294405303 0.0 33 6.820305413276406E-4 0.0 0.0 6.542036952414729 0.0 34 6.820305413276406E-4 0.0 0.0 6.705042251792035 0.0 35 6.820305413276406E-4 0.0 0.0 6.893964711739792 0.0 36 6.820305413276406E-4 0.0 0.0 7.057652041658425 0.0 37 6.820305413276406E-4 0.0 0.0 7.198150333171919 0.0 38 6.820305413276406E-4 0.0 0.0 7.392529037450297 0.0 39 6.820305413276406E-4 0.0 0.0 7.664659223440026 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGGGA 30 2.1525193E-6 45.000004 4 CGGGATA 30 2.1525193E-6 45.000004 6 CGGGTAT 35 1.202261E-7 45.0 6 GTATTGG 25 3.8741186E-5 45.0 2 CACGGGG 45 3.8016879E-10 45.0 4 TGGGTAC 25 3.8741186E-5 45.0 6 TACGGGA 20 7.013143E-4 45.0 4 ACGGCGA 35 1.202261E-7 45.0 16 CGAGGGC 20 7.013143E-4 45.0 4 TAGGGAC 80 0.0 45.0 5 GCGATAT 25 3.8741186E-5 45.0 9 CGATGAG 25 3.8741186E-5 45.0 10 CGACTGG 25 3.8741186E-5 45.0 2 GACGAAG 20 7.013143E-4 45.0 1 AACATAC 55 1.8189894E-12 44.999996 16 ACATACG 55 1.8189894E-12 44.999996 17 ACGAAAA 55 1.8189894E-12 44.999996 21 TGTTAGG 75 0.0 42.000004 2 GGCGATT 75 0.0 42.000004 8 CGTTTTT 435 0.0 41.89655 1 >>END_MODULE