##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546965_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1531168 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.588361956362725 31.0 31.0 33.0 30.0 34.0 2 31.967423561620933 31.0 31.0 34.0 30.0 34.0 3 31.96527356893561 33.0 31.0 34.0 30.0 34.0 4 35.73741548935192 37.0 35.0 37.0 33.0 37.0 5 35.70433877928483 37.0 35.0 37.0 33.0 37.0 6 35.76363142385421 37.0 35.0 37.0 33.0 37.0 7 36.08770559468327 37.0 35.0 37.0 35.0 37.0 8 36.02035047754394 37.0 35.0 37.0 35.0 37.0 9 37.79568473217831 39.0 38.0 39.0 35.0 39.0 10 37.34794548997889 39.0 37.0 39.0 34.0 39.0 11 37.07957193462768 39.0 37.0 39.0 33.0 39.0 12 36.7122719388075 39.0 35.0 39.0 33.0 39.0 13 36.63408522121674 39.0 35.0 39.0 33.0 39.0 14 37.70877330247236 40.0 36.0 41.0 33.0 41.0 15 37.77173896006186 40.0 36.0 41.0 33.0 41.0 16 37.823217961712885 40.0 36.0 41.0 33.0 41.0 17 37.744049640535856 40.0 36.0 41.0 33.0 41.0 18 37.56524039164873 39.0 36.0 41.0 32.0 41.0 19 37.43108006436916 39.0 36.0 41.0 32.0 41.0 20 37.220485276599305 39.0 35.0 41.0 32.0 41.0 21 37.159282325649436 39.0 35.0 41.0 32.0 41.0 22 37.09611682062321 39.0 35.0 41.0 32.0 41.0 23 36.99486535768773 39.0 35.0 41.0 32.0 41.0 24 36.8572579886727 38.0 35.0 41.0 32.0 41.0 25 36.73167346757508 38.0 35.0 41.0 31.0 41.0 26 36.5793093899559 38.0 35.0 41.0 31.0 41.0 27 36.46617941336287 38.0 35.0 41.0 31.0 41.0 28 36.469794300821334 38.0 35.0 41.0 31.0 41.0 29 36.4275487732241 38.0 35.0 41.0 31.0 41.0 30 36.297577404961444 38.0 35.0 40.0 30.0 41.0 31 36.13267388033188 38.0 35.0 40.0 30.0 41.0 32 35.91724487450104 38.0 35.0 41.0 30.0 41.0 33 35.62069740224456 38.0 35.0 41.0 27.0 41.0 34 35.25490409935422 38.0 34.0 41.0 25.0 41.0 35 35.026744942423036 38.0 34.0 41.0 24.0 41.0 36 34.88503221070451 38.0 34.0 40.0 23.0 41.0 37 34.802623226190725 38.0 34.0 40.0 23.0 41.0 38 34.67656716963782 38.0 34.0 40.0 23.0 41.0 39 34.549962512278206 37.0 34.0 40.0 23.0 41.0 40 34.39847227737257 37.0 34.0 40.0 22.0 41.0 41 34.283657965683716 37.0 34.0 40.0 21.0 41.0 42 34.181740997722 37.0 33.0 40.0 21.0 41.0 43 34.049690171163455 37.0 33.0 40.0 21.0 41.0 44 33.89283409789128 36.0 33.0 40.0 20.0 41.0 45 33.77440228635917 36.0 33.0 40.0 20.0 41.0 46 33.71523111768271 36.0 33.0 40.0 20.0 41.0 47 33.64880078476039 36.0 33.0 40.0 20.0 41.0 48 33.532416429810446 35.0 33.0 40.0 20.0 41.0 49 33.41932302660452 35.0 33.0 40.0 20.0 41.0 50 33.31080913394219 35.0 33.0 40.0 20.0 41.0 51 32.93681033041443 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 3.0 13 4.0 14 20.0 15 57.0 16 155.0 17 391.0 18 839.0 19 1593.0 20 2656.0 21 4316.0 22 6561.0 23 9526.0 24 14448.0 25 22074.0 26 31192.0 27 35854.0 28 36406.0 29 36598.0 30 38650.0 31 43677.0 32 51096.0 33 65373.0 34 109249.0 35 147442.0 36 120994.0 37 154752.0 38 218948.0 39 378058.0 40 231.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.22176273276349 23.432895671800875 25.03546312357625 18.309878471859392 2 37.098803005287465 23.930032498066836 25.846477982820957 13.12468651382474 3 28.848761207130764 24.47549844301866 33.409985057158984 13.265755292691592 4 25.45279159439069 27.10943541139836 33.0379814625175 14.39979153169345 5 22.947579886726995 30.59305053397145 31.931114025371482 14.528255553930073 6 21.650073669251185 39.40109772409037 29.00667986791782 9.942148738740622 7 83.53949403331313 3.25947250726243 11.506183514806997 1.6948499446174423 8 83.15168551066898 2.9394553700181825 11.370861982486574 2.537997136826266 9 77.97655123409058 4.454899788919309 13.9410567618968 3.627492215093314 10 43.10630838680014 24.020551631173063 19.63879861648101 13.23434136554578 11 32.810312127735166 24.987395243369768 26.36177088340404 15.840521745491024 12 28.54494085560827 20.71660327279567 31.38512560346089 19.353330268135174 13 24.505410248908024 22.637163263600073 33.800797822316035 19.056628665175865 14 22.07889663315848 24.047067336830448 34.48125875148906 19.392777278522015 15 21.885384229555477 21.574967606428558 37.68796108591611 18.851687078099854 16 25.723304039791845 20.44524180233652 34.63480166774645 19.196652490125185 17 25.22682030972434 21.172660348178646 31.955735752053332 21.64478359004368 18 25.523260674204266 21.513903111872768 32.812924512528994 20.149911701393968 19 27.376747685427073 24.277022508307383 29.033979289013356 19.31225051725219 20 28.438943342598595 24.142745929904493 28.416084975652574 19.002225751844342 21 27.368192125227274 23.991292921482163 29.758067044243347 18.88244790904721 22 25.563817948128488 21.835161131894086 30.428862149679198 22.172158770298232 23 24.937694622667138 23.796017158143325 29.59015601161989 21.676132207569644 24 24.677958264540536 22.44913686806412 32.456595226650506 20.416309640744842 25 25.27541066688959 22.559183577504232 30.212230140650796 21.95317561495538 26 22.527834959978264 23.927093565173777 30.311566072436207 23.23350540241175 27 22.794624757048215 22.646698468097558 30.956759806892514 23.601916967961714 28 22.62553815126753 24.565233860686746 31.1743714602186 21.63485652782712 29 24.553347509874815 23.086101590419865 30.35127432130243 22.009276578402893 30 25.5875253401325 22.467815419340006 31.254898221488432 20.68976101903906 31 26.629409705531987 22.972854709607308 28.574656732638093 21.823078852222615 32 28.437702459821523 22.443520240757383 27.91881753014692 21.199959769274173 33 26.655598863090134 23.208426508390982 27.88152573721499 22.254448891303895 34 24.16109793308115 24.793099124328617 29.871771092394827 21.17403185019541 35 23.735540450166148 25.582431189784533 29.47024754958306 21.21178081046626 36 25.64120984764572 27.168867165458003 26.01020919977429 21.179713787121987 37 24.316665447553763 27.267288762565574 27.134840853518362 21.281204936362304 38 25.03454878889841 26.891170661873808 26.64430029885682 21.42998025037096 39 24.36316589688395 26.089103220547972 26.430280674622246 23.11745020794583 40 25.40818512403603 24.766714037910926 27.68304980250371 22.142051035549333 41 22.286646533887854 25.307085832514787 27.81993876570043 24.586328867896924 42 24.01323695375034 25.591574536562938 26.69151915400531 23.703669355681413 43 23.22723567890656 23.896071495747037 28.782145394888087 24.094547430458316 44 23.623142594411586 24.483662145499384 28.067070367196806 23.826124892892224 45 23.070296662417185 24.5882881564923 28.117097535998663 24.22431764509185 46 23.82403498505716 24.778339150243475 27.805440030094676 23.592185834604695 47 22.853207486049865 25.137215511295953 29.042796087692537 22.966780914961653 48 23.45007210182031 24.097355744111685 29.33120336893143 23.121368785136575 49 24.08416320090284 23.898226713201947 28.553561725427905 23.464048360467306 50 22.914141361365964 24.380603565382767 29.416105874730924 23.289149198520345 51 22.316362410917677 24.987264624130077 28.88775105017869 23.80862191477356 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 911.0 1 1728.5 2 2546.0 3 18519.5 4 34493.0 5 23815.5 6 13138.0 7 12856.0 8 12574.0 9 12842.5 10 13111.0 11 13032.0 12 12953.0 13 12732.0 14 12511.0 15 12028.0 16 11545.0 17 10867.0 18 10189.0 19 9829.0 20 9469.0 21 9012.0 22 8555.0 23 8345.5 24 8136.0 25 8683.5 26 10295.0 27 11359.0 28 12650.0 29 13941.0 30 15326.0 31 16711.0 32 19706.0 33 22701.0 34 26048.5 35 29396.0 36 31417.5 37 33439.0 38 37663.5 39 41888.0 40 46646.0 41 51404.0 42 57750.5 43 64097.0 44 70167.0 45 76237.0 46 84174.5 47 92112.0 48 99150.5 49 106189.0 50 105934.5 51 105680.0 52 100846.0 53 96012.0 54 91991.0 55 87970.0 56 87552.0 57 87134.0 58 86629.0 59 86124.0 60 83649.5 61 81175.0 62 75675.0 63 70175.0 64 63323.5 65 56472.0 66 48859.5 67 41247.0 68 35871.5 69 30496.0 70 26884.0 71 23272.0 72 20329.0 73 17386.0 74 14970.5 75 10315.5 76 8076.0 77 6100.0 78 4124.0 79 3165.5 80 2207.0 81 1689.5 82 1172.0 83 901.5 84 631.0 85 439.5 86 248.0 87 173.5 88 99.0 89 65.5 90 32.0 91 31.5 92 31.0 93 21.5 94 12.0 95 7.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1531168.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.627676791794034 #Duplication Level Percentage of deduplicated Percentage of total 1 70.89716664158051 22.4231267199387 2 6.582224600810141 4.1636094449083725 3 3.3252936365165326 3.15513937120663 4 2.3613161642378024 2.9873177778300817 5 1.9331813472244246 3.0571017414969526 6 1.6805300291334864 3.1890756360202874 7 1.4644198127009447 3.2421337566523523 8 1.3475472758684688 3.4095831762264357 9 1.2292822825376688 3.4991408446182213 >10 9.093452431880644 46.42232206315509 >50 0.061674622349036506 1.2836052382017828 >100 0.02120816239012375 1.3139741069291433 >500 0.0022871477286065286 0.4628263603411993 >1k 2.079225207824117E-4 0.07069314256419285 >5k 0.0 0.0 >10k+ 2.079225207824117E-4 1.3203506199105712 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20078 1.3112865472632658 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.306192396915296E-4 0.0 0.0 0.060215469497795146 0.0 2 1.306192396915296E-4 0.0 0.0 0.1575268030679847 0.0 3 1.306192396915296E-4 0.0 0.0 0.257972998390771 0.0 4 1.306192396915296E-4 0.0 0.0 0.42751677151037637 0.0 5 1.306192396915296E-4 0.0 0.0 0.7055398231937972 0.0 6 1.306192396915296E-4 0.0 0.0 1.3829312002340697 0.0 7 1.306192396915296E-4 0.0 0.0 1.7579390373884511 0.0 8 1.306192396915296E-4 0.0 0.0 2.6522889715563545 0.0 9 1.306192396915296E-4 0.0 0.0 3.2195683295366675 0.0 10 1.306192396915296E-4 0.0 0.0 3.906103053355347 0.0 11 1.306192396915296E-4 0.0 0.0 4.351841208802692 0.0 12 1.306192396915296E-4 0.0 0.0 4.677017806014755 0.0 13 1.306192396915296E-4 0.0 0.0 4.879281698677088 0.0 14 1.306192396915296E-4 0.0 0.0 5.019240214006563 0.0 15 1.306192396915296E-4 0.0 0.0 5.121057911346109 0.0 16 1.959288595372944E-4 0.0 0.0 5.266763673222011 0.0 17 1.959288595372944E-4 0.0 0.0 5.4098570503040815 0.0 18 1.959288595372944E-4 0.0 0.0 5.615974210537315 0.0 19 1.959288595372944E-4 0.0 0.0 5.735686743714602 0.0 20 1.959288595372944E-4 0.0 0.0 5.865979435306903 0.0 21 1.959288595372944E-4 0.0 0.0 6.006982904553909 0.0 22 1.959288595372944E-4 0.0 0.0 6.167122092415725 0.0 23 1.959288595372944E-4 0.0 0.0 6.3452867353549705 0.0 24 1.959288595372944E-4 0.0 0.0 6.498503103513135 0.0 25 1.959288595372944E-4 0.0 0.0 6.635326757090012 0.0 26 1.959288595372944E-4 0.0 0.0 6.7666644025998455 0.0 27 1.959288595372944E-4 0.0 0.0 6.913349808773433 0.0 28 1.959288595372944E-4 0.0 0.0 7.04880196033355 0.0 29 1.959288595372944E-4 0.0 0.0 7.205610357583231 0.0 30 1.959288595372944E-4 0.0 0.0 7.4185197182804234 0.0 31 1.959288595372944E-4 0.0 0.0 7.573172898075195 0.0 32 1.959288595372944E-4 0.0 0.0 7.75551735668457 0.0 33 1.959288595372944E-4 0.0 0.0 7.929045016614768 0.0 34 1.959288595372944E-4 0.0 0.0 8.117397960249953 0.0 35 1.959288595372944E-4 0.0 0.0 8.316265752680307 0.0 36 1.959288595372944E-4 0.0 0.0 8.495410039917239 0.0 37 1.959288595372944E-4 0.0 0.0 8.682979268114277 0.0 38 1.959288595372944E-4 0.0 0.0 8.923383978766536 0.0 39 1.959288595372944E-4 0.0 0.0 9.262014357666827 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12175 0.0 42.930183 1 CTACGGG 220 0.0 39.886368 3 GGGCGAT 3685 0.0 38.71099 7 GCGATAC 105 0.0 38.57143 9 TACGGGA 310 0.0 38.46774 4 GGCGATA 675 0.0 38.333332 8 TATTGCG 100 0.0 38.250004 1 TAGGGAC 880 0.0 37.585228 5 AGGGCGA 1970 0.0 37.119286 6 TTGATCC 955 0.0 36.98953 17 GTAGCAT 955 0.0 36.75393 29 GTTTTTT 14745 0.0 36.698883 2 GACCGAT 1140 0.0 36.31579 9 GCCAGTA 955 0.0 36.282722 25 GTTGATC 970 0.0 36.185566 16 CACGACC 865 0.0 36.15607 27 CATATGC 960 0.0 36.093754 33 TAGCATA 955 0.0 36.047123 30 TCACGAC 50 4.8807124E-8 36.000004 25 TACGGGT 100 0.0 36.000004 4 >>END_MODULE