##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546946_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1062997 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.73739154484914 31.0 31.0 34.0 30.0 34.0 2 32.095606102369054 33.0 31.0 34.0 30.0 34.0 3 32.062771578847354 33.0 31.0 34.0 30.0 34.0 4 35.84266089179932 37.0 35.0 37.0 35.0 37.0 5 35.84362608737372 37.0 35.0 37.0 35.0 37.0 6 35.89015679254034 37.0 35.0 37.0 35.0 37.0 7 36.12235217973334 37.0 35.0 37.0 35.0 37.0 8 13.219526489726688 0.0 0.0 36.0 0.0 37.0 9 24.928196410714236 18.0 17.0 39.0 17.0 39.0 10 32.72611964097735 32.0 32.0 38.0 27.0 39.0 11 35.55482564861425 37.0 35.0 37.0 32.0 39.0 12 36.695518425734036 38.0 35.0 39.0 33.0 39.0 13 36.98188423861968 39.0 37.0 39.0 33.0 39.0 14 38.172916762700176 40.0 37.0 41.0 33.0 41.0 15 38.456850771921275 40.0 38.0 41.0 34.0 41.0 16 38.5290391224058 40.0 38.0 41.0 34.0 41.0 17 38.51495347587999 40.0 38.0 41.0 34.0 41.0 18 38.436928796600554 40.0 38.0 41.0 34.0 41.0 19 38.40143575193533 40.0 37.0 41.0 34.0 41.0 20 38.34161055957825 40.0 37.0 41.0 34.0 41.0 21 38.27384649251127 40.0 37.0 41.0 34.0 41.0 22 38.23642305669724 40.0 37.0 41.0 34.0 41.0 23 38.08283090168646 40.0 37.0 41.0 34.0 41.0 24 37.887237687406454 40.0 35.0 41.0 34.0 41.0 25 37.788601473005095 40.0 35.0 41.0 33.0 41.0 26 37.7161591236852 40.0 35.0 41.0 33.0 41.0 27 37.67605741126268 40.0 35.0 41.0 33.0 41.0 28 37.59767148919517 40.0 35.0 41.0 33.0 41.0 29 37.57162814194208 40.0 35.0 41.0 33.0 41.0 30 37.453858289346066 40.0 35.0 41.0 33.0 41.0 31 37.34846758739677 40.0 35.0 41.0 33.0 41.0 32 37.14202015621869 40.0 35.0 41.0 32.0 41.0 33 36.89439857309099 40.0 35.0 41.0 31.0 41.0 34 36.62154832045622 40.0 35.0 41.0 30.0 41.0 35 36.39923066574976 40.0 35.0 41.0 30.0 41.0 36 36.25050023659521 40.0 35.0 41.0 29.0 41.0 37 36.18084811151866 40.0 35.0 41.0 29.0 41.0 38 36.080592889725935 40.0 35.0 41.0 29.0 41.0 39 35.99657101572253 39.0 35.0 41.0 28.0 41.0 40 35.88377671809045 39.0 35.0 41.0 27.0 41.0 41 35.811377642646214 39.0 35.0 41.0 27.0 41.0 42 35.75939160693774 39.0 35.0 41.0 26.0 41.0 43 35.66719661485404 39.0 35.0 41.0 26.0 41.0 44 35.443307930314006 39.0 35.0 40.0 25.0 41.0 45 35.38141217708046 39.0 35.0 40.0 24.0 41.0 46 35.38194463389831 39.0 35.0 40.0 25.0 41.0 47 35.35451370041496 38.0 35.0 40.0 25.0 41.0 48 35.28277031826054 38.0 35.0 40.0 24.0 41.0 49 35.193637423247665 38.0 35.0 40.0 24.0 41.0 50 35.097843173593155 38.0 34.0 40.0 24.0 41.0 51 34.737437640934075 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 5.0 12 2.0 13 6.0 14 12.0 15 16.0 16 45.0 17 103.0 18 298.0 19 645.0 20 1205.0 21 2125.0 22 3387.0 23 5430.0 24 8737.0 25 13506.0 26 17809.0 27 19088.0 28 18186.0 29 18446.0 30 20764.0 31 25992.0 32 33338.0 33 45818.0 34 68513.0 35 103280.0 36 110637.0 37 190234.0 38 246611.0 39 108739.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.13630894536861 22.31539693903181 27.525947862505728 18.022346253093847 2 35.27855675980271 23.833463311749703 28.718895725952194 12.169084202495398 3 28.366213639361167 23.981347078119693 34.702543845373036 12.949895437146106 4 25.80138984399768 25.928671482610017 33.77319032885323 14.496748344539073 5 22.400721732987016 30.44505299638663 32.84647087432984 14.30775439629651 6 20.757161120868638 38.82701456354063 30.32586169104899 10.089962624541744 7 83.02187118119807 4.092673826925194 11.05751004000952 1.8279449518672206 8 31.36584581141809 63.70892862350506 3.9838306222877393 0.9413949427891142 9 79.88216335511765 4.9465802819763365 12.048387718874089 3.122868644031921 10 42.24593296124072 28.92049554232044 17.679353751703907 11.154217744734932 11 32.81476805673017 23.209943207741883 28.09161267623521 15.883676059292737 12 30.074590991319827 22.06036329359349 31.3201260210518 16.544919694034885 13 23.057543906520902 28.09057786616519 31.3237008194755 17.528177407838406 14 17.766183723942778 31.041573964931228 33.591440051100804 17.60080226002519 15 17.343510847161376 24.95068189279932 41.15326760094337 16.552539659095935 16 21.186042858070152 22.58774013473227 38.65580053377385 17.570416473423727 17 21.019250289511636 22.17381610672467 31.32567636597281 25.48125723779089 18 22.468831050322812 24.419353958665923 34.03763133856445 19.07418365244681 19 25.083419802689942 25.690194798291998 29.780799005077153 19.445586393940907 20 26.230930096698295 24.855667513643027 29.79340487320284 19.119997516455832 21 24.317284056304956 25.199412604174796 32.35249017635986 18.130813163160386 22 23.12659396028399 22.171746486584627 32.59717572109799 22.10448383203339 23 20.588110784884623 26.305248274454208 31.87139756744375 21.235243373217422 24 20.68538293146641 25.1400521356128 35.548454040792215 18.626110892128576 25 20.87945685641634 25.18906450347461 33.55381059400921 20.37766804609985 26 19.26345982161756 28.771294744952243 30.66669049865616 21.29855493477404 27 19.033731986073338 27.78079336065859 33.46632210627123 19.719152546996842 28 17.893183141626928 26.563574497388043 36.15362978446788 19.38961257651715 29 18.806261917954615 26.053601280154133 35.5039572077814 19.636179594109862 30 20.313133527187755 26.305812716310584 34.09962586912287 19.2814278873788 31 25.106091550587635 24.507030593689354 30.779861090859146 19.60701676486387 32 24.654726212773884 26.49593554826589 30.40921093850688 18.44012730045334 33 24.133746379340675 25.681916317731847 29.6119368163786 20.57240048654888 34 20.25988784540314 26.954732703855232 31.3230423039764 21.462337146765233 35 20.764875159572416 26.971383738618265 31.456062434795207 20.807678667014113 36 25.103645635876674 26.081823372972828 29.617675308585067 19.196855682565424 37 21.531575347813774 28.98550042944618 29.362453515861286 20.12047070687876 38 21.12329573836991 30.25878718378321 27.710802570468214 20.907114507378665 39 21.53213978967015 28.271105186562146 28.463203565014766 21.73355145875294 40 22.89592538831248 26.149274174809523 29.01757954161677 21.937220895261227 41 20.030160009858918 25.816253479548863 29.83677282250091 24.31681368809131 42 21.997333952965057 27.474207359004776 27.99659829707892 22.531860390951245 43 21.44098242986575 26.74984030999147 28.548340211684508 23.260837048458274 44 20.63749944731735 28.326326414844065 29.491334406400014 21.544839731438564 45 20.618026203272446 30.130094440529938 27.5417522344842 21.71012712171342 46 22.291314086493188 28.017388572122027 28.917014817539467 20.774282523845315 47 21.358950213406057 27.785497042795043 29.579575483279818 21.27597726051908 48 21.34182881042938 26.902804053068824 30.622758107501713 21.132609029000083 49 21.4875488830166 26.180224403267367 30.467348449713406 21.864878264002627 50 19.973809897864246 28.135545067389657 30.496981647173037 21.39366338757306 51 19.77098712414052 29.30092935351652 29.65125959903932 21.27682392330364 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 730.0 1 1351.0 2 1972.0 3 13848.5 4 25725.0 5 17485.0 6 9245.0 7 9103.5 8 8962.0 9 8906.5 10 8851.0 11 8654.5 12 8458.0 13 8093.0 14 7728.0 15 7318.0 16 6908.0 17 6341.0 18 5774.0 19 5727.5 20 5681.0 21 6024.0 22 6367.0 23 7009.5 24 7652.0 25 8579.5 26 10886.5 27 12266.0 28 14679.0 29 17092.0 30 19633.0 31 22174.0 32 24516.5 33 26859.0 34 30090.0 35 33321.0 36 36326.5 37 39332.0 38 45422.0 39 51512.0 40 59361.5 41 67211.0 42 72034.5 43 76858.0 44 78004.0 45 79150.0 46 80382.0 47 81614.0 48 80178.0 49 78742.0 50 74642.5 51 70543.0 52 65994.5 53 61446.0 54 57523.5 55 53601.0 56 50015.5 57 46430.0 58 42515.0 59 38600.0 60 34359.5 61 30119.0 62 26434.5 63 22750.0 64 19053.0 65 15356.0 66 12622.5 67 9889.0 68 7967.5 69 6046.0 70 4937.5 71 3829.0 72 3037.0 73 2245.0 74 1741.5 75 961.5 76 685.0 77 491.5 78 298.0 79 212.5 80 127.0 81 89.0 82 51.0 83 37.5 84 24.0 85 17.0 86 10.0 87 10.0 88 10.0 89 6.5 90 3.0 91 3.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1062997.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.5415493896331 #Duplication Level Percentage of deduplicated Percentage of total 1 69.69429291089804 21.982659820246468 2 6.871826595953164 4.33496115946502 3 3.9655995445685126 3.752434616835428 4 2.7252788709499254 3.4383807243436237 5 2.237513089167023 3.528731480595609 6 1.8374413172849293 3.4773447635817063 7 1.58812825516937 3.506441805824757 8 1.4060221569928377 3.547849384616645 9 1.1934333754950737 3.3878463980772975 >10 8.396612705159217 44.864755051259586 >50 0.059979727981800936 1.178965873045346 >100 0.022081091605091814 1.260896385345304 >500 8.951793875382246E-4 0.15962381630130945 >1k 2.983931291794082E-4 0.09562370127484104 >5k 2.983931291794082E-4 0.5356244920818114 >10k+ 2.983931291794082E-4 0.9478605271052404 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10071 0.9474156559237702 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5691 0.5353731007707453 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.407364272900112E-5 0.0 0.0 0.009877732486545117 0.0 2 9.407364272900112E-5 0.0 0.0 0.027187282748681322 0.0 3 9.407364272900112E-5 0.0 0.0 0.042521286513508505 0.0 4 9.407364272900112E-5 0.0 0.0 0.06839153826398381 0.0 5 9.407364272900112E-5 0.0 0.0 0.1265290494705065 0.0 6 9.407364272900112E-5 0.0 0.0 0.20489239386376443 0.0 7 9.407364272900112E-5 0.0 0.0 0.25757363379200504 0.0 8 9.407364272900112E-5 0.0 0.0 0.3480724780973041 0.0 9 9.407364272900112E-5 0.0 0.0 0.49049997318901184 0.0 10 9.407364272900112E-5 0.0 0.0 0.6984967972628333 0.0 11 9.407364272900112E-5 0.0 0.0 0.8902188811445376 0.0 12 9.407364272900112E-5 0.0 0.0 1.0461929807892214 0.0 13 9.407364272900112E-5 0.0 0.0 1.1208874531160482 0.0 14 9.407364272900112E-5 0.0 0.0 1.1540013753566567 0.0 15 9.407364272900112E-5 0.0 0.0 1.1967108091556231 0.0 16 9.407364272900112E-5 0.0 0.0 1.274509711692507 0.0 17 9.407364272900112E-5 0.0 0.0 1.3685833544215082 0.0 18 9.407364272900112E-5 0.0 0.0 1.50969381851501 0.0 19 9.407364272900112E-5 0.0 0.0 1.5751690738543946 0.0 20 9.407364272900112E-5 0.0 0.0 1.6544731546749427 0.0 21 9.407364272900112E-5 0.0 0.0 1.7465712509066347 0.0 22 9.407364272900112E-5 0.0 0.0 1.847230048626666 0.0 23 9.407364272900112E-5 0.0 0.0 1.9578606524759712 0.0 24 9.407364272900112E-5 0.0 0.0 2.042903225502988 0.0 25 9.407364272900112E-5 0.0 0.0 2.117597697829815 0.0 26 9.407364272900112E-5 0.0 0.0 2.192104022871184 0.0 27 9.407364272900112E-5 0.0 0.0 2.278745847824594 0.0 28 9.407364272900112E-5 0.0 0.0 2.367269145632584 0.0 29 9.407364272900112E-5 0.0 0.0 2.4643531449289133 0.0 30 9.407364272900112E-5 0.0 0.0 2.5719733922108907 0.0 31 9.407364272900112E-5 0.0 0.0 2.670750717076342 0.0 32 9.407364272900112E-5 0.0 0.0 2.769057673728148 0.0 33 9.407364272900112E-5 0.0 0.0 2.873103122586423 0.0 34 9.407364272900112E-5 0.0 0.0 2.981475959010232 0.0 35 9.407364272900112E-5 0.0 0.0 3.101984295346083 0.0 36 9.407364272900112E-5 0.0 0.0 3.205371228705255 0.0 37 9.407364272900112E-5 0.0 0.0 3.3261617859692927 0.0 38 9.407364272900112E-5 0.0 0.0 3.457676738504436 0.0 39 9.407364272900112E-5 0.0 0.0 3.6438484774651294 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACGGT 20 7.0330454E-4 45.000004 11 TCACGAC 135 0.0 45.0 25 CGGTCTA 130 0.0 44.999996 31 CGTTTTT 8175 0.0 43.899086 1 GAGCGAT 760 0.0 41.743423 7 GTTTTTA 5710 0.0 41.61121 2 CACGACG 145 0.0 40.344826 26 AATGCGA 85 0.0 39.705883 2 CGACGGT 150 0.0 39.0 28 GAGGGGA 6340 0.0 38.93139 7 AGCGATG 315 0.0 37.857143 8 AGGGGAA 6455 0.0 37.68009 8 CCGCTCG 90 0.0 37.5 19 CGAGATC 150 0.0 37.5 6 TGATGCG 60 1.546141E-10 37.499996 1 TAGTCGA 30 1.1398643E-4 37.499996 2 GGGCGAT 505 0.0 37.425743 7 TATTTTT 6590 0.0 37.352047 7 TAGAGGC 490 0.0 37.19388 5 ATTAGCG 85 0.0 37.058823 1 >>END_MODULE