##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546944_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1161033 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.68543012989295 31.0 31.0 34.0 30.0 34.0 2 32.03324367179916 31.0 31.0 34.0 30.0 34.0 3 31.966005272890605 33.0 31.0 34.0 30.0 34.0 4 35.784021642795686 37.0 35.0 37.0 35.0 37.0 5 35.802641268594435 37.0 35.0 37.0 35.0 37.0 6 35.8537250879174 37.0 35.0 37.0 35.0 37.0 7 36.08475469689492 37.0 35.0 37.0 35.0 37.0 8 13.281868818543487 0.0 0.0 35.0 0.0 37.0 9 24.949606083548012 18.0 17.0 39.0 17.0 39.0 10 32.66204578164445 32.0 32.0 38.0 27.0 39.0 11 35.577410805722145 37.0 35.0 37.0 32.0 39.0 12 36.670449504880565 38.0 35.0 39.0 33.0 39.0 13 36.93048776391369 39.0 37.0 39.0 33.0 39.0 14 38.069351172619555 40.0 37.0 41.0 33.0 41.0 15 38.31658617799839 40.0 37.0 41.0 33.0 41.0 16 38.38164634424689 40.0 38.0 41.0 34.0 41.0 17 38.33013187394329 40.0 37.0 41.0 33.0 41.0 18 38.21200775516286 40.0 37.0 41.0 33.0 41.0 19 38.17593815162876 40.0 37.0 41.0 34.0 41.0 20 38.11835408640409 40.0 36.0 41.0 34.0 41.0 21 38.067163465637925 40.0 36.0 41.0 33.0 41.0 22 38.03467084914899 40.0 36.0 41.0 33.0 41.0 23 37.872722825277144 39.0 36.0 41.0 33.0 41.0 24 37.6163278735402 39.0 35.0 41.0 33.0 41.0 25 37.493930835729905 39.0 35.0 41.0 33.0 41.0 26 37.424835469792846 39.0 35.0 41.0 33.0 41.0 27 37.40251913597633 39.0 35.0 41.0 33.0 41.0 28 37.287277794860266 39.0 35.0 41.0 33.0 41.0 29 37.232129491582064 39.0 35.0 41.0 33.0 41.0 30 37.061333312662086 39.0 35.0 41.0 32.0 41.0 31 36.88645714635157 39.0 35.0 41.0 32.0 41.0 32 36.624173473105415 39.0 35.0 41.0 31.0 41.0 33 36.292504175161255 39.0 35.0 41.0 30.0 41.0 34 35.908732998975914 39.0 35.0 41.0 27.0 41.0 35 35.630774491336595 39.0 35.0 41.0 25.0 41.0 36 35.50698214434904 39.0 35.0 41.0 24.0 41.0 37 35.465666350568846 39.0 35.0 41.0 24.0 41.0 38 35.35994325742679 39.0 35.0 41.0 23.0 41.0 39 35.246319441394 39.0 35.0 41.0 23.0 41.0 40 35.154317749796945 39.0 35.0 41.0 23.0 41.0 41 35.06370792216931 39.0 35.0 40.0 23.0 41.0 42 35.00648215856052 39.0 35.0 40.0 23.0 41.0 43 34.91026180995717 38.0 34.0 40.0 22.0 41.0 44 34.741766168575744 38.0 34.0 40.0 21.0 41.0 45 34.6663367880155 38.0 34.0 40.0 22.0 41.0 46 34.65336299657288 38.0 34.0 40.0 22.0 41.0 47 34.61993069964419 38.0 34.0 40.0 22.0 41.0 48 34.539162969528 38.0 34.0 40.0 22.0 41.0 49 34.425889703393445 38.0 34.0 40.0 20.0 41.0 50 34.343687044209766 38.0 34.0 40.0 20.0 41.0 51 34.01719675495873 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 5.0 14 15.0 15 36.0 16 60.0 17 166.0 18 396.0 19 917.0 20 1779.0 21 2928.0 22 4763.0 23 7435.0 24 11864.0 25 18249.0 26 24371.0 27 25628.0 28 24528.0 29 24286.0 30 26087.0 31 30876.0 32 39318.0 33 53556.0 34 79215.0 35 112827.0 36 120802.0 37 200440.0 38 243619.0 39 106833.0 40 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.832256275230762 21.78818345387254 26.337063632127595 20.042496638769098 2 38.15481558233056 22.540013935865733 27.47157057551336 11.833599906290347 3 28.23709575869075 22.576963790004246 36.692755503073556 12.493184948231445 4 25.139853905961328 24.717385293958053 36.141436117664185 14.001324682416435 5 22.12012922974627 28.978418356756443 34.97833394916424 13.923118464333056 6 19.90839192339925 37.793154888793 32.74790639025764 9.550546797550112 7 80.35973137714431 3.8244390986302714 13.832337237615125 1.9834922866102858 8 30.587761071390734 63.40009284835143 5.057565116581527 0.9545809636763124 9 77.2586997957853 4.364303167954744 15.085876112048494 3.291120924211457 10 41.30976466646512 24.026276600234446 21.60188383964969 13.06207489365074 11 35.03276823311655 22.22159060078396 27.373037631143987 15.372603534955509 12 32.043447516134336 19.548884484764862 32.303302317849706 16.104365681251092 13 25.225381190715506 23.02923344986749 33.16675753402358 18.578627825393422 14 19.3746430979998 26.006409809195773 35.695798482902724 18.9231486099017 15 19.519944738866165 22.50633702918005 41.44438616301173 16.529332068942054 16 24.908938850144654 20.08065231565339 38.35386246558022 16.656546368621736 17 24.008016998655506 20.831449235293054 33.12584569086322 22.034688075188217 18 25.070346837686785 22.655256138283754 34.75637643374478 17.518020590284685 19 26.050852990397345 25.55095333207583 30.834868604079297 17.563325073447526 20 27.301549568358524 25.0417516125726 30.31007731907706 17.34662149999182 21 25.704092820789764 24.474584271075845 32.95005396056787 16.87126894756652 22 22.97566046787645 21.893951334716586 34.75155314276166 20.378835054645304 23 22.93896900432632 23.50596408543082 33.82996004420202 19.725106866040846 24 23.78778208715859 22.75060226539642 34.87204928714343 18.58956636030156 25 23.314841180224853 22.2035893897934 33.277865487027505 21.20370394295425 26 19.788929341371002 25.419001871609158 32.850056802864344 21.94201198415549 27 19.390146533302673 24.043674899852114 35.68804676525129 20.878131801593923 28 18.79274749296532 25.19954213187739 36.203966640052435 19.80374373510486 29 21.593959861606002 25.746124356499774 34.046922008246106 18.612993773648125 30 23.584514824298704 22.97109556748172 34.74078686824578 18.7036027399738 31 26.45979916160867 22.19204794351237 32.050510192216755 19.2976427026622 32 27.615580263437817 23.760392684790183 31.208070743897892 17.415956307874108 33 26.31492817172294 23.7986344918706 30.879225655084742 19.00721168132172 34 21.926853069637126 24.808424911264364 33.53375829972102 19.73096371937749 35 20.986311327929524 26.827833489659643 32.27918586293413 19.90666931947671 36 24.411623097706954 28.01307111856424 28.713568003665703 18.8617377800631 37 23.2096762107537 29.094091210155092 28.438984938412602 19.257247640678603 38 23.237410133906618 29.25300142200954 27.03730212664067 20.47228631744317 39 22.692722773599026 27.19121678711975 27.918155642432215 22.197904796849013 40 23.39132479438569 24.659075151180026 29.010631050107964 22.93896900432632 41 20.248778458493426 25.226759273853546 29.620863489668253 24.90359877798478 42 21.201464557854948 26.679603422124952 28.276887909301458 23.842044110718643 43 20.98734489028305 25.26655142446425 28.93578390967354 24.810319775579163 44 21.10603230054615 25.653706656055427 30.077439659337845 23.16282138406057 45 21.769062550332333 26.70613152253209 28.595569634971618 22.92923629216396 46 22.16724244702778 27.212060294582496 29.38925939228256 21.231437866107164 47 21.442370716422356 26.144907164568103 30.45744608465048 21.95527603435906 48 21.399305618358824 25.15656316400998 31.466891983259735 21.97723923437146 49 21.913847410021937 23.96477964019972 32.083239666745044 22.038133283033297 50 20.21225925533555 25.19204880481433 31.985568024336946 22.610123915513167 51 19.738284786048286 26.24137298423042 31.72536870183707 22.29497352788422 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 695.0 1 1624.0 2 2553.0 3 21346.0 4 40139.0 5 26746.5 6 13354.0 7 12786.5 8 12219.0 9 12005.0 10 11791.0 11 11415.0 12 11039.0 13 10506.5 14 9974.0 15 9326.5 16 8679.0 17 8095.5 18 7512.0 19 7116.0 20 6720.0 21 6811.5 22 6903.0 23 7223.0 24 7543.0 25 8103.0 26 10240.0 27 11817.0 28 13339.0 29 14861.0 30 16483.5 31 18106.0 32 20159.0 33 22212.0 34 24524.0 35 26836.0 36 30245.0 37 33654.0 38 38671.0 39 43688.0 40 49843.5 41 55999.0 42 61088.0 43 66177.0 44 69129.0 45 72081.0 46 76267.5 47 80454.0 48 81196.0 49 81938.0 50 79425.0 51 76912.0 52 73825.5 53 70739.0 54 68910.0 55 67081.0 56 66008.5 57 64936.0 58 62747.0 59 60558.0 60 55576.5 61 50595.0 62 43786.5 63 36978.0 64 30195.5 65 23413.0 66 18612.0 67 13811.0 68 11173.5 69 8536.0 70 7023.5 71 5511.0 72 4410.5 73 3310.0 74 2432.5 75 1181.5 76 808.0 77 576.0 78 344.0 79 266.0 80 188.0 81 135.5 82 83.0 83 58.5 84 34.0 85 24.5 86 15.0 87 12.0 88 9.0 89 6.0 90 3.0 91 3.5 92 4.0 93 2.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1161033.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.160512372939 #Duplication Level Percentage of deduplicated Percentage of total 1 68.09000290299727 23.94079389544288 2 7.937183832032829 5.581509006649633 3 4.592556431885083 4.844299117401482 4 3.3776544102684145 4.750402387350182 5 2.711998104282069 4.76776214504984 6 2.199362362637413 4.639842453845346 7 1.856153280865757 4.568431027856623 8 1.520078560121398 4.275739281679017 9 1.2618744768764707 3.993133784157997 >10 6.396146252192819 33.98649061553202 >50 0.03171862541031155 0.7752411749956655 >100 0.023536492715396387 1.5512738287095786 >500 0.001238762653461567 0.2701313946050634 >1k 0.0 0.0 >5k 2.477525306923134E-4 0.7322555637053089 >10k+ 2.477525306923134E-4 1.3226943230194397 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15184 1.3078008979934248 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8406 0.7240104286441471 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.722603922541392E-4 0.0 0.0 0.007665587455309195 0.0 2 1.722603922541392E-4 0.0 0.0 0.0215325490317674 0.0 3 1.722603922541392E-4 0.0 0.0 0.03634694276562337 0.0 4 1.722603922541392E-4 0.0 0.0 0.05443428395230799 0.0 5 1.722603922541392E-4 0.0 0.0 0.1025810635873399 0.0 6 1.722603922541392E-4 0.0 0.0 0.1991330134457849 0.0 7 1.722603922541392E-4 0.0 0.0 0.26958751387772784 0.0 8 1.722603922541392E-4 0.0 0.0 0.39034204884787943 0.0 9 1.722603922541392E-4 0.0 0.0 0.6522639752702981 0.0 10 1.722603922541392E-4 0.0 0.0 0.9734434766281407 0.0 11 1.722603922541392E-4 0.0 0.0 1.2055643551905932 0.0 12 1.722603922541392E-4 0.0 0.0 1.3680920352823736 0.0 13 1.722603922541392E-4 0.0 0.0 1.4635242925911667 0.0 14 1.722603922541392E-4 0.0 0.0 1.524590601645259 0.0 15 1.722603922541392E-4 0.0 0.0 1.5698950848080977 0.0 16 1.722603922541392E-4 0.0 0.0 1.6295833107241569 0.0 17 1.722603922541392E-4 0.0 0.0 1.694180957819459 0.0 18 1.722603922541392E-4 0.0 0.0 1.8100260716103678 0.0 19 1.722603922541392E-4 0.0 0.0 1.868422344584521 0.0 20 1.722603922541392E-4 0.0 0.0 1.9360345485442705 0.0 21 1.722603922541392E-4 0.0 0.0 2.020442140748799 0.0 22 1.722603922541392E-4 0.0 0.0 2.112601450604763 0.0 23 1.722603922541392E-4 0.0 0.0 2.2160438161533738 0.0 24 1.722603922541392E-4 0.0 0.0 2.2885654412923664 0.0 25 1.722603922541392E-4 0.0 0.0 2.356091515055989 0.0 26 1.722603922541392E-4 0.0 0.0 2.431972217843937 0.0 27 1.722603922541392E-4 0.0 0.0 2.5141404249491615 0.0 28 1.722603922541392E-4 0.0 0.0 2.589848867344856 0.0 29 1.722603922541392E-4 0.0 0.0 2.679338141120881 0.0 30 1.722603922541392E-4 0.0 0.0 2.7912212658899445 0.0 31 1.722603922541392E-4 0.0 0.0 2.8875148251600082 0.0 32 1.722603922541392E-4 0.0 0.0 2.99621113267237 0.0 33 1.722603922541392E-4 0.0 0.0 3.111281074698135 0.0 34 1.722603922541392E-4 0.0 0.0 3.2319494794721595 0.0 35 1.722603922541392E-4 0.0 0.0 3.3685519705296922 0.0 36 1.722603922541392E-4 0.0 0.0 3.500934081976998 0.0 37 1.722603922541392E-4 0.0 0.0 3.633316193424304 0.0 38 1.722603922541392E-4 0.0 0.0 3.8334827692236138 0.0 39 1.722603922541392E-4 0.0 0.0 4.149580589009959 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12180 0.0 43.89163 1 CGGTCTA 200 0.0 42.750004 31 GTTTTTA 8645 0.0 41.694622 2 CGTTAGA 105 0.0 40.714287 2 CACGACG 205 0.0 40.609753 26 ACGGTCT 215 0.0 39.76744 30 TATACGA 85 0.0 39.705883 2 TGTACGA 150 0.0 39.0 2 CGACGGT 220 0.0 38.863636 28 TTATTTT 9525 0.0 38.858265 6 TATTTTT 9535 0.0 38.841114 7 CGACGTT 145 0.0 38.793102 27 TCGACGT 145 0.0 38.793102 26 ACGGGTG 35 6.248343E-6 38.571426 5 TTTTATT 9675 0.0 38.34884 4 TTTATTT 9715 0.0 38.121464 5 TTTTTAT 9745 0.0 37.842484 3 ACGACGG 220 0.0 37.840908 27 CGCGCGA 30 1.1399289E-4 37.500004 2 TTATACG 30 1.1399289E-4 37.500004 1 >>END_MODULE