##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546932_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1132163 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.760463820138973 31.0 31.0 34.0 30.0 34.0 2 32.109692685593856 33.0 31.0 34.0 30.0 34.0 3 32.08698835768348 33.0 31.0 34.0 30.0 34.0 4 35.858190914205814 37.0 35.0 37.0 35.0 37.0 5 35.859388621603074 37.0 35.0 37.0 35.0 37.0 6 35.90642336836657 37.0 35.0 37.0 35.0 37.0 7 36.11862691149596 37.0 35.0 37.0 35.0 37.0 8 13.24052631997336 0.0 0.0 36.0 0.0 37.0 9 24.925961191100576 18.0 17.0 39.0 17.0 39.0 10 32.7178453985866 32.0 32.0 38.0 27.0 39.0 11 35.600376447561 37.0 35.0 37.0 32.0 39.0 12 36.66789499391872 37.0 35.0 39.0 33.0 39.0 13 36.8996151614211 39.0 37.0 39.0 33.0 39.0 14 38.07983744390163 40.0 37.0 41.0 33.0 41.0 15 38.366286479950325 40.0 37.0 41.0 34.0 41.0 16 38.46294482331608 40.0 38.0 41.0 34.0 41.0 17 38.42727769764601 40.0 37.0 41.0 34.0 41.0 18 38.36143205527826 40.0 37.0 41.0 34.0 41.0 19 38.324971757600274 40.0 37.0 41.0 34.0 41.0 20 38.28163170850841 40.0 37.0 41.0 34.0 41.0 21 38.21069934276248 40.0 37.0 41.0 34.0 41.0 22 38.162873190521154 40.0 37.0 41.0 34.0 41.0 23 38.04138979987864 40.0 36.0 41.0 34.0 41.0 24 37.884428302285095 40.0 35.0 41.0 34.0 41.0 25 37.78512987970814 40.0 35.0 41.0 33.0 41.0 26 37.712253447604276 40.0 35.0 41.0 33.0 41.0 27 37.66478766750017 40.0 35.0 41.0 33.0 41.0 28 37.586656691660124 40.0 35.0 41.0 33.0 41.0 29 37.56326165048672 40.0 35.0 41.0 33.0 41.0 30 37.446093892840516 40.0 35.0 41.0 33.0 41.0 31 37.34385066461278 40.0 35.0 41.0 33.0 41.0 32 37.14874889923094 40.0 35.0 41.0 32.0 41.0 33 36.93656478793248 40.0 35.0 41.0 31.0 41.0 34 36.6770129389496 40.0 35.0 41.0 31.0 41.0 35 36.49290782334346 40.0 35.0 41.0 30.0 41.0 36 36.351313370954536 40.0 35.0 41.0 30.0 41.0 37 36.28748422267818 39.0 35.0 41.0 30.0 41.0 38 36.18106138427064 39.0 35.0 41.0 29.0 41.0 39 36.09692332287842 39.0 35.0 41.0 29.0 41.0 40 35.976722433077214 39.0 35.0 41.0 29.0 41.0 41 35.90876667052359 39.0 35.0 41.0 28.0 41.0 42 35.85960060521321 39.0 35.0 41.0 28.0 41.0 43 35.76136121742187 39.0 35.0 41.0 27.0 41.0 44 35.567026126096685 39.0 35.0 40.0 27.0 41.0 45 35.481503988383295 38.0 35.0 40.0 26.0 41.0 46 35.457904029720105 38.0 35.0 40.0 27.0 41.0 47 35.40976961797904 38.0 35.0 40.0 26.0 41.0 48 35.32800400649023 38.0 35.0 40.0 26.0 41.0 49 35.22401014694881 38.0 34.0 40.0 26.0 41.0 50 35.122916929806046 38.0 34.0 40.0 26.0 41.0 51 34.763979215007026 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 1.0 12 1.0 13 5.0 14 10.0 15 31.0 16 54.0 17 134.0 18 322.0 19 660.0 20 1250.0 21 2219.0 22 3574.0 23 5462.0 24 8562.0 25 13012.0 26 16820.0 27 18550.0 28 18344.0 29 19263.0 30 22066.0 31 27667.0 32 36599.0 33 51184.0 34 77373.0 35 117283.0 36 122580.0 37 204593.0 38 256555.0 39 107973.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.641478303035875 23.046063155217052 25.64189078781059 16.670567753936492 2 35.80509166966241 23.713281568113427 27.884412403514336 12.597214358709833 3 29.50281894038226 24.68646299163636 32.85754789725508 12.953170170726299 4 26.838096634495212 25.40499910348598 32.906480780594315 14.850423481424494 5 23.316077278625073 30.37009688534248 31.573280525860675 14.740545310171768 6 21.972631149401632 38.45532842885698 29.33031727763582 10.241723144105574 7 82.94865668636054 4.632901799475871 10.23403873823822 2.184402775925375 8 31.18013925556656 63.867570305689206 3.8051941284073054 1.1470963103369392 9 78.68451804201338 5.671268183114975 11.79300153776444 3.851212237107201 10 44.68031546694248 25.306161745261065 18.008007680872808 12.00551510692365 11 37.60739398832147 22.185939657098846 24.71304926940732 15.493617085172366 12 33.35332456545569 20.814759005549554 29.602362910640963 16.229553518353807 13 23.66178721615174 28.732435170554066 29.776366123959182 17.82941148933502 14 18.423230577222537 31.714161300095483 32.38129138648764 17.481316736194348 15 18.412631396715845 23.217681552921267 40.94966890809892 17.420018142263967 16 21.760294233250864 21.24164100045665 38.77153731397334 18.226527452319143 17 21.804634138370535 21.428009924366016 30.145482585104794 26.621873352158655 18 23.89523416681167 23.42701536792847 33.05990391842871 19.617846546831156 19 27.25729422353495 24.317081550978084 28.581661827846343 19.84396239764062 20 28.920482298043655 24.534629730877974 27.608833710340296 18.936054260738075 21 25.453137048287218 25.253960781265594 30.31604106475834 18.976861105688844 22 24.11967181404091 22.150962361426757 30.5149523522673 23.214413472265036 23 22.014586238907295 25.85263782688535 29.979163777653923 22.15361215655343 24 22.435638684535707 24.22213055893895 34.17007975000067 19.17215100652468 25 21.7608241922762 24.46917979124914 32.758710539030155 21.011285477444503 26 20.17324360538191 28.456679824371577 29.407426315822015 21.962650254424496 27 19.848378722851745 27.568380171406414 31.585822889460264 20.997418216281577 28 18.94276707505898 25.98565754224436 35.66995211820206 19.4016232644946 29 20.123957416025785 24.742815301330285 34.853903545690855 20.27932373695307 30 21.479857582344593 25.73489859675683 33.090288235881225 19.69495558501735 31 27.539939037046786 23.981970793958112 28.27711204128734 20.200978127707756 32 28.134906369489197 25.03632427486148 28.421525875691046 18.407243479958275 33 26.95274443697595 24.74520011694429 27.89889795020682 20.403157495872946 34 21.912392473521923 26.123093582814487 30.52369667618532 21.44081726747827 35 22.451537455295746 26.40335358071232 30.18929253119913 20.955816432792805 36 27.410452381856675 25.636856177069912 28.032800930608047 18.919890510465365 37 23.133594720901495 29.136705580380212 27.586398778267796 20.1433009204505 38 22.49631899293653 30.629600154748037 25.972938525636323 20.90114232667911 39 23.13915929066751 27.523598633765634 27.281230706179233 22.056011369387623 40 23.88375172126275 25.6336764229179 27.738673671547293 22.74389818427205 41 20.63139318278375 25.203526347354575 28.121834046864276 26.043246422997395 42 22.174898844071038 26.472248254005827 27.17903694079386 24.17381596112927 43 22.33282663362078 26.339051885638376 27.35286350110364 23.975257979637206 44 21.855510204802666 26.972352920913334 29.21902588231553 21.953110991968472 45 21.15481604680598 29.671080930926024 26.338786906125712 22.835316116142288 46 22.702119747774834 28.473550186678064 28.37718597057138 20.447144094975723 47 22.594979698153004 26.42437528871726 28.650291521627185 22.33035349150255 48 22.456042107011093 25.65990939467197 30.31524612622034 21.5688023720966 49 22.283805423777316 24.688759480746146 30.893254769852046 22.13418032562449 50 20.922517340700942 28.233655401209894 29.10066836665745 21.74315889143171 51 20.954049902708356 29.599448136001616 27.832123113014646 21.614378848275383 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 906.0 1 1753.5 2 2601.0 3 13022.0 4 23443.0 5 15757.5 6 8072.0 7 7924.5 8 7777.0 9 7871.0 10 7965.0 11 7828.5 12 7692.0 13 7280.0 14 6868.0 15 6439.5 16 6011.0 17 5778.5 18 5546.0 19 5258.5 20 4971.0 21 5062.0 22 5153.0 23 5846.0 24 6539.0 25 7769.0 26 10302.0 27 11605.0 28 13849.0 29 16093.0 30 16952.5 31 17812.0 32 21067.5 33 24323.0 34 27308.5 35 30294.0 36 33466.5 37 36639.0 38 43571.5 39 50504.0 40 59935.5 41 69367.0 42 74810.5 43 80254.0 44 80881.0 45 81508.0 46 82583.0 47 83658.0 48 81652.5 49 79647.0 50 77348.5 51 75050.0 52 70903.0 53 66756.0 54 63451.0 55 60146.0 56 57765.0 57 55384.0 58 52797.0 59 50210.0 60 46451.5 61 42693.0 62 37952.0 63 33211.0 64 28107.5 65 23004.0 66 19120.5 67 15237.0 68 12826.5 69 10416.0 70 8727.0 71 7038.0 72 5627.5 73 4217.0 74 3204.5 75 1650.5 76 1109.0 77 851.0 78 593.0 79 457.0 80 321.0 81 243.5 82 166.0 83 134.5 84 103.0 85 70.5 86 38.0 87 28.5 88 19.0 89 11.5 90 4.0 91 5.0 92 6.0 93 4.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1132163.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.29657699762485 #Duplication Level Percentage of deduplicated Percentage of total 1 72.03458204682693 20.383320973797623 2 5.936197236570758 3.359481243554246 3 3.117822659752754 2.6467112686989993 4 2.1680034818841043 2.4538830982500928 5 1.7785977200638334 2.5164113666793133 6 1.4507852346956502 2.463135366034962 7 1.2877135849591435 2.5506520625378752 8 1.1646127968282343 2.6363644542295486 9 1.0408988919263518 2.650848807792276 >10 9.847555820650646 52.92112207294155 >50 0.14415079890808777 2.5238255690529456 >100 0.027203615519019914 1.3571827327444719 >500 0.0012507409430039774 0.25393535707917164 >1k 0.0 0.0 >5k 6.253704715019887E-4 1.28312562660702 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9321 0.8232913458574428 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5181 0.4576196183765059 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009715915464469338 0.0 2 0.0 0.0 0.0 0.02720456330051415 0.0 3 0.0 0.0 0.0 0.045046517153448755 0.0 4 0.0 0.0 0.0 0.07057287687373638 0.0 5 0.0 0.0 0.0 0.14653367050504212 0.0 6 0.0 0.0 0.0 0.22231781112790297 0.0 7 0.0 0.0 0.0 0.2739004895938129 0.0 8 0.0 0.0 0.0 0.3582523011262513 0.0 9 0.0 0.0 0.0 0.49816148381460973 0.0 10 0.0 0.0 0.0 0.7357597801729963 0.0 11 0.0 0.0 0.0 0.9311380075130524 0.0 12 0.0 0.0 0.0 1.1033746907468271 0.0 13 0.0 0.0 0.0 1.1780989133190185 0.0 14 0.0 0.0 0.0 1.2168742486726734 0.0 15 0.0 0.0 0.0 1.2636872959105712 0.0 16 0.0 0.0 0.0 1.3407963340967688 0.0 17 0.0 0.0 0.0 1.4246181866038725 0.0 18 0.0 0.0 0.0 1.5397959481099452 0.0 19 0.0 0.0 0.0 1.6121353550681305 0.0 20 0.0 0.0 0.0 1.6843864355220934 0.0 21 0.0 0.0 0.0 1.774037837307879 0.0 22 0.0 0.0 0.0 1.8721685834990192 0.0 23 0.0 0.0 0.0 1.9698576971690471 0.0 24 0.0 0.0 0.0 2.0557110592732672 0.0 25 0.0 0.0 0.0 2.129905322820124 0.0 26 0.0 0.0 0.0 2.202774688803644 0.0 27 0.0 0.0 0.0 2.285713276268523 0.0 28 0.0 0.0 0.0 2.3668853336489533 0.0 29 0.0 0.0 0.0 2.4553001643756245 0.0 30 0.0 0.0 0.0 2.564913356115683 0.0 31 0.0 0.0 0.0 2.661012592709707 0.0 32 0.0 0.0 0.0 2.7485441583941537 0.0 33 0.0 0.0 0.0 2.844113435962843 0.0 34 0.0 0.0 0.0 2.948338710945332 0.0 35 0.0 0.0 0.0 3.072437449377872 0.0 36 0.0 0.0 0.0 3.1797541520081474 0.0 37 0.0 0.0 0.0 3.2869825281341996 0.0 38 0.0 0.0 0.0 3.415939224298975 0.0 39 0.0 0.0 0.0 3.6039863517885675 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAA 25 3.8907696E-5 45.0 26 CGTAAGA 70 0.0 45.0 2 ACGTAAC 25 3.8907696E-5 45.0 38 CGTTTTT 7095 0.0 43.477802 1 TACGTAG 70 0.0 41.785713 1 TCGTAAG 60 3.6379788E-12 41.250004 1 ACGTAGA 115 0.0 41.086956 2 TAGCGGA 55 6.184564E-11 40.909092 2 AGGGGAA 7645 0.0 40.232178 8 GTTTTTA 5185 0.0 40.139824 2 CGCATCG 45 1.9283107E-8 40.000004 21 CGGTCTA 180 0.0 40.000004 31 CTATACG 40 3.4581535E-7 39.375 1 TAGAGGC 585 0.0 39.23077 5 GAGCGAT 660 0.0 39.204544 7 CGTTAGA 115 0.0 39.130432 2 GAGGGGA 7780 0.0 39.129177 7 TCACGAC 185 0.0 38.91892 25 GCGCGAC 350 0.0 38.571426 9 CGCGAAC 35 6.248207E-6 38.571426 21 >>END_MODULE