##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546931_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1287971 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.709782285470713 31.0 31.0 34.0 30.0 34.0 2 32.059849173622695 33.0 31.0 34.0 30.0 34.0 3 32.056529223095865 33.0 31.0 34.0 30.0 34.0 4 35.829055933712795 37.0 35.0 37.0 35.0 37.0 5 35.828995373343034 37.0 35.0 37.0 35.0 37.0 6 35.875749531627655 37.0 35.0 37.0 35.0 37.0 7 36.06311555151475 37.0 35.0 37.0 35.0 37.0 8 13.204419975294474 0.0 0.0 35.0 0.0 37.0 9 24.879161875539122 18.0 17.0 38.0 17.0 39.0 10 32.63353677994303 32.0 32.0 37.0 27.0 39.0 11 35.53991898885922 37.0 35.0 37.0 32.0 39.0 12 36.61792074510994 37.0 35.0 39.0 33.0 39.0 13 36.85081729324651 39.0 35.0 39.0 33.0 39.0 14 38.000437121643266 40.0 37.0 41.0 33.0 41.0 15 38.29161293227875 40.0 37.0 41.0 33.0 41.0 16 38.391363625423246 40.0 37.0 41.0 34.0 41.0 17 38.372855444726625 40.0 37.0 41.0 34.0 41.0 18 38.293012808518206 40.0 37.0 41.0 34.0 41.0 19 38.25804307705686 40.0 37.0 41.0 34.0 41.0 20 38.20883389455197 40.0 37.0 41.0 34.0 41.0 21 38.12185289886185 40.0 37.0 41.0 34.0 41.0 22 38.082288343448724 40.0 36.0 41.0 33.0 41.0 23 37.96414670827216 40.0 36.0 41.0 33.0 41.0 24 37.82671737174206 40.0 35.0 41.0 33.0 41.0 25 37.716075129020766 40.0 35.0 41.0 33.0 41.0 26 37.638706927407526 40.0 35.0 41.0 33.0 41.0 27 37.58983082693632 40.0 35.0 41.0 33.0 41.0 28 37.50078612018438 40.0 35.0 41.0 33.0 41.0 29 37.48821440855423 40.0 35.0 41.0 33.0 41.0 30 37.37309923903566 40.0 35.0 41.0 33.0 41.0 31 37.27027704816335 40.0 35.0 41.0 33.0 41.0 32 37.08589867318441 40.0 35.0 41.0 32.0 41.0 33 36.86897608719451 40.0 35.0 41.0 31.0 41.0 34 36.63090783876345 40.0 35.0 41.0 31.0 41.0 35 36.443892758454965 40.0 35.0 41.0 30.0 41.0 36 36.31423844170404 40.0 35.0 41.0 30.0 41.0 37 36.244646036284976 39.0 35.0 41.0 30.0 41.0 38 36.154326456108095 39.0 35.0 41.0 29.0 41.0 39 36.06790913770574 39.0 35.0 41.0 29.0 41.0 40 35.94807569425088 39.0 35.0 41.0 28.0 41.0 41 35.8858755360175 39.0 35.0 41.0 28.0 41.0 42 35.82029331405754 39.0 35.0 41.0 28.0 41.0 43 35.7067340801928 39.0 35.0 40.0 27.0 41.0 44 35.5217143864264 38.0 35.0 40.0 27.0 41.0 45 35.43147788265419 38.0 35.0 40.0 26.0 41.0 46 35.39555626640662 38.0 35.0 40.0 26.0 41.0 47 35.36244837810789 38.0 35.0 40.0 26.0 41.0 48 35.286682697048306 38.0 35.0 40.0 26.0 41.0 49 35.18466021362282 38.0 34.0 40.0 26.0 41.0 50 35.08544524682621 38.0 34.0 40.0 26.0 41.0 51 34.711922861617225 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 1.0 12 4.0 13 8.0 14 14.0 15 27.0 16 54.0 17 165.0 18 381.0 19 822.0 20 1561.0 21 2511.0 22 4240.0 23 6456.0 24 9942.0 25 14969.0 26 19293.0 27 21018.0 28 21352.0 29 22421.0 30 26190.0 31 32809.0 32 42714.0 33 58946.0 34 89985.0 35 134595.0 36 140395.0 37 232228.0 38 285947.0 39 118901.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.323709151836496 23.20060001350962 27.86755291850515 16.60813791614873 2 34.596664055324226 23.467453847951543 29.13737964597029 12.798502450753938 3 29.599424210638283 24.16475215668676 32.794760130468774 13.441063502206182 4 26.503547051913433 26.526373652822926 31.735574791668448 15.23450450359519 5 23.009058433769084 30.939050646326667 31.360178140656892 14.691712779247359 6 21.515701828690244 39.551045792180105 28.830928646685365 10.102323732444287 7 83.63332714789385 4.377427752643499 9.791214243177835 2.1980308562848077 8 31.367709366127034 63.78854803407841 3.6513244475224984 1.192418152272062 9 79.4118035266322 5.699584850901146 11.164381806733225 3.7242298157334286 10 45.03595189643245 25.81828317563051 17.171815203913752 11.973949724023289 11 38.059552583093875 22.525351890686977 24.13198744381667 15.283108082402478 12 33.8718030141983 21.176175550536463 28.882870809979416 16.06915062528582 13 24.26584138928594 28.717649698634517 29.32830009371329 17.688208818366252 14 18.902366590552116 32.0852721062819 31.485258596660948 17.527102706505037 15 17.968727556753993 24.261726389802256 41.04906088724047 16.720485166203275 16 21.864389803807693 21.061731979990235 38.739536837397736 18.334341378804336 17 21.79994735906321 21.027880286124454 29.998501519055942 27.173670835756397 18 24.153494139231395 23.70658966700337 32.64297099857062 19.496945195194613 19 27.437186085711556 24.96989450849437 28.392331814924404 19.20058759086967 20 28.76539922094519 24.653660680248237 27.099057354552237 19.481882744254335 21 25.778453086288433 25.06081270463388 30.798519531883873 18.36221467719382 22 23.95807048450625 22.650820554189497 30.616838422604236 22.774270538700016 23 22.046614403585174 25.965491459046824 29.862939460593445 22.124954676774557 24 22.827299682989757 24.006596421813846 34.00550167666819 19.16060221852821 25 21.874172632768907 24.463982496500307 32.3612099961878 21.300634874542983 26 20.031429279075383 28.58410631916402 29.118435120045405 22.266029281715195 27 20.064038708946086 27.160704705307804 32.24280670915727 20.53244987658884 28 18.98940271170702 26.425206778724053 35.526343372638046 19.05904713693088 29 21.03859481308197 25.714243566043027 33.86737744871585 19.379784172159155 30 21.993197051796972 25.79747525371301 32.50702073260967 19.702306961880353 31 27.35690477502987 24.487585512406724 28.29077673332707 19.864732979236333 32 27.91506951631675 25.505543214870517 28.33169380366483 18.247693465147897 33 26.2644888743613 25.76750563483184 27.65706681283973 20.310938677967126 34 21.344347038869664 26.93787360119133 30.281970634431985 21.43580872550702 35 21.503201547239804 26.94975275064423 30.292374595390736 21.25467110672523 36 27.119942917969425 25.88521014836514 27.51669098139632 19.47815595226911 37 22.808044591066103 29.356173392102775 27.731292086545427 20.104489930285695 38 22.229460135360192 30.06449679379427 25.65779819576683 22.04824487507871 39 22.621549708805556 27.956685360151745 26.672106747745094 22.749658183297605 40 23.17971445009243 25.946935140620404 27.513274755409867 23.3600756538773 41 20.458768093380986 24.98255007294419 28.45646369367012 26.10221814000471 42 22.88079467627765 26.348652260027595 26.498655637432833 24.271897426261926 43 21.783797927127242 26.35261197651189 27.158918950814886 24.70467114554598 44 21.82952877044592 27.698139166176876 28.646763009415583 21.82556905396162 45 21.262745822693212 29.809910316303707 26.732201268506824 22.195142592496257 46 22.85222260439094 28.553205002286543 27.802256417264054 20.792315976058468 47 22.085668077930325 26.932205771713804 28.545363210817637 22.436762939538234 48 22.830793550475903 25.54187943672645 29.664643070379693 21.962683942417957 49 22.41269407463367 24.805449812146392 30.406585241437888 22.375270871782053 50 20.838124460876838 28.10956147304559 28.92347731431841 22.128836751759163 51 20.70442579840695 29.253143122011288 27.699459071671644 22.342972007910117 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 936.0 1 1918.5 2 2901.0 3 14212.0 4 25523.0 5 17313.5 6 9104.0 7 8957.0 8 8810.0 9 8825.0 10 8840.0 11 8613.0 12 8386.0 13 8122.5 14 7859.0 15 7396.5 16 6934.0 17 6636.0 18 6338.0 19 6377.0 20 6416.0 21 6461.0 22 6506.0 23 7054.5 24 7603.0 25 8761.0 26 11519.5 27 13120.0 28 14406.0 29 15692.0 30 18081.5 31 20471.0 32 24166.5 33 27862.0 34 31084.0 35 34306.0 36 38263.0 37 42220.0 38 52068.0 39 61916.0 40 71082.5 41 80249.0 42 85384.5 43 90520.0 44 91949.5 45 93379.0 46 94336.0 47 95293.0 48 93578.5 49 91864.0 50 88104.5 51 84345.0 52 79648.0 53 74951.0 54 71335.0 55 67719.0 56 65777.5 57 63836.0 58 60530.0 59 57224.0 60 52446.5 61 47669.0 62 42270.0 63 36871.0 64 31306.5 65 25742.0 66 21343.5 67 16945.0 68 14289.0 69 11633.0 70 9779.5 71 7926.0 72 6399.0 73 4872.0 74 3827.0 75 2049.0 76 1316.0 77 970.0 78 624.0 79 453.0 80 282.0 81 213.5 82 145.0 83 107.5 84 70.0 85 51.0 86 32.0 87 19.5 88 7.0 89 9.0 90 11.0 91 5.5 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1287971.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.127664359096727 #Duplication Level Percentage of deduplicated Percentage of total 1 72.79594283791215 19.74783904010872 2 5.821511794092788 3.1584803602534435 3 2.8343253574221334 2.306658809418735 4 1.996555254619122 2.166475232867938 5 1.6106415348285714 2.1846471479824943 6 1.3661969455144434 2.2237039311803386 7 1.1749825443633237 2.231217246390001 8 1.0651890980299892 2.3116873864261223 9 0.9469262540651495 2.3119107833786514 >10 10.124185413981628 54.59888177452748 >50 0.23458107745309392 3.9153122693808764 >100 0.026667876821840162 1.3652738136632436 >500 0.0017205081717992607 0.3013543807532426 >1k 0.0 0.0 >5k 5.735027239330869E-4 1.1765578236687646 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9644 0.7487746230311086 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5481 0.4255530598126821 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.552829993843029E-4 0.0 0.0 0.010248677959363992 0.0 2 1.552829993843029E-4 0.0 0.0 0.02880499638578819 0.0 3 1.552829993843029E-4 0.0 0.0 0.04472150382267924 0.0 4 1.552829993843029E-4 0.0 0.0 0.06250140725218192 0.0 5 1.552829993843029E-4 0.0 0.0 0.10691234507609255 0.0 6 1.552829993843029E-4 0.0 0.0 0.16514346984520614 0.0 7 1.552829993843029E-4 0.0 0.0 0.20512884218666413 0.0 8 1.552829993843029E-4 0.0 0.0 0.28929222785295633 0.0 9 1.552829993843029E-4 0.0 0.0 0.4061426848896443 0.0 10 1.552829993843029E-4 0.0 0.0 0.5750129467200736 0.0 11 1.552829993843029E-4 0.0 0.0 0.7604984894846235 0.0 12 1.552829993843029E-4 0.0 0.0 0.927350072323057 0.0 13 1.552829993843029E-4 0.0 0.0 1.0337965684009967 0.0 14 1.552829993843029E-4 0.0 0.0 1.0715303372513822 0.0 15 1.552829993843029E-4 0.0 0.0 1.1112827850937637 0.0 16 1.552829993843029E-4 0.0 0.0 1.1903218317803739 0.0 17 1.552829993843029E-4 0.0 0.0 1.2717677649574408 0.0 18 1.552829993843029E-4 0.0 0.0 1.3965376549627282 0.0 19 1.552829993843029E-4 0.0 0.0 1.4552346287299947 0.0 20 1.552829993843029E-4 0.0 0.0 1.5295375439353835 0.0 21 1.552829993843029E-4 0.0 0.0 1.6121480996078328 0.0 22 1.552829993843029E-4 0.0 0.0 1.701047616755346 0.0 23 1.552829993843029E-4 0.0 0.0 1.798332415869612 0.0 24 1.552829993843029E-4 0.0 0.0 1.874731651566689 0.0 25 1.552829993843029E-4 0.0 0.0 1.9463171142828526 0.0 26 1.552829993843029E-4 0.0 0.0 2.018290784497477 0.0 27 1.552829993843029E-4 0.0 0.0 2.095311152192091 0.0 28 1.552829993843029E-4 0.0 0.0 2.1781546323636167 0.0 29 1.552829993843029E-4 0.0 0.0 2.262162735030525 0.0 30 1.552829993843029E-4 0.0 0.0 2.3595251756444826 0.0 31 1.552829993843029E-4 0.0 0.0 2.453704314771062 0.0 32 1.552829993843029E-4 0.0 0.0 2.542681473418268 0.0 33 1.552829993843029E-4 0.0 0.0 2.641519102526377 0.0 34 1.552829993843029E-4 0.0 0.0 2.739968524136025 0.0 35 1.552829993843029E-4 0.0 0.0 2.8558096416767147 0.0 36 1.552829993843029E-4 0.0 0.0 2.9602374587626583 0.0 37 1.552829993843029E-4 0.0 0.0 3.0638888608516806 0.0 38 1.552829993843029E-4 0.0 0.0 3.199761485312946 0.0 39 1.552829993843029E-4 0.0 0.0 3.3853246695771877 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 55 1.8189894E-12 45.0 1 CGCGATT 20 7.0336036E-4 45.0 12 CGTTTTT 7525 0.0 43.146175 1 TCACGAC 200 0.0 40.5 25 GTTTTTA 5475 0.0 40.356163 2 ACGACGG 210 0.0 39.642857 27 TAAGCGA 125 0.0 39.6 2 AGGGGAA 9035 0.0 38.92363 8 CGACGGT 220 0.0 38.863636 28 GAGGGGA 8910 0.0 38.712124 7 TATGCGA 105 0.0 38.57143 2 AGACTTA 945 0.0 38.333336 8 CGGTCTA 230 0.0 38.152172 31 ATGGGCG 95 0.0 37.894737 5 GAGCGAT 805 0.0 37.73292 7 CTCACGA 215 0.0 37.674416 24 TTATTCG 30 1.1399984E-4 37.499996 18 AATAGAG 820 0.0 37.042683 3 GTTGCGA 55 2.750312E-9 36.81818 2 CGTTAGA 135 0.0 36.666664 2 >>END_MODULE