##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546930_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1108954 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.739547357239346 31.0 31.0 34.0 30.0 34.0 2 32.07647386636416 33.0 31.0 34.0 30.0 34.0 3 32.11666218797173 33.0 31.0 34.0 30.0 34.0 4 35.846185684888646 37.0 35.0 37.0 35.0 37.0 5 35.81085960283294 37.0 35.0 37.0 35.0 37.0 6 35.856987756029554 37.0 35.0 37.0 35.0 37.0 7 36.093727963468275 37.0 35.0 37.0 35.0 37.0 8 13.225985027332062 0.0 0.0 35.0 0.0 37.0 9 24.90948046537548 18.0 17.0 39.0 17.0 39.0 10 32.71405486611708 32.0 32.0 38.0 27.0 39.0 11 35.56972336093291 37.0 35.0 37.0 32.0 39.0 12 36.51072181533229 37.0 35.0 39.0 33.0 39.0 13 36.60404849975743 39.0 35.0 39.0 33.0 39.0 14 37.79132948706619 40.0 36.0 41.0 33.0 41.0 15 38.150198294969854 40.0 37.0 41.0 33.0 41.0 16 38.29143138489063 40.0 37.0 41.0 34.0 41.0 17 38.28795243084925 40.0 37.0 41.0 34.0 41.0 18 38.23387264034396 40.0 36.0 41.0 34.0 41.0 19 38.21641023883768 40.0 37.0 41.0 34.0 41.0 20 38.17562946704732 40.0 36.0 41.0 34.0 41.0 21 38.082851948773346 40.0 36.0 41.0 34.0 41.0 22 38.02332828954132 40.0 36.0 41.0 33.0 41.0 23 37.95374740521248 40.0 36.0 41.0 34.0 41.0 24 37.882963585504896 40.0 35.0 41.0 33.0 41.0 25 37.7860767894791 40.0 35.0 41.0 33.0 41.0 26 37.68287052483692 40.0 35.0 41.0 33.0 41.0 27 37.61108305664617 40.0 35.0 41.0 33.0 41.0 28 37.59586962128276 40.0 35.0 41.0 33.0 41.0 29 37.62365526433017 40.0 35.0 41.0 33.0 41.0 30 37.55721968629898 40.0 36.0 41.0 33.0 41.0 31 37.47860145686836 40.0 35.0 41.0 33.0 41.0 32 37.30668449728302 40.0 35.0 41.0 33.0 41.0 33 37.18649466073435 40.0 35.0 41.0 32.0 41.0 34 37.08165803090119 40.0 35.0 41.0 32.0 41.0 35 36.97902708317928 40.0 35.0 41.0 32.0 41.0 36 36.86252901382745 40.0 35.0 41.0 31.0 41.0 37 36.762566346304716 40.0 35.0 41.0 31.0 41.0 38 36.691177451905126 39.0 35.0 41.0 31.0 41.0 39 36.647447955460734 39.0 35.0 41.0 31.0 41.0 40 36.50289371786386 39.0 35.0 41.0 30.0 41.0 41 36.486959783724124 39.0 35.0 41.0 31.0 41.0 42 36.45150204607224 39.0 35.0 41.0 30.0 41.0 43 36.36052802911573 39.0 35.0 41.0 30.0 41.0 44 36.179012835518876 39.0 35.0 41.0 30.0 41.0 45 36.09093884868083 39.0 35.0 40.0 30.0 41.0 46 36.094483630520294 39.0 35.0 40.0 30.0 41.0 47 36.0478568092094 39.0 35.0 40.0 30.0 41.0 48 35.99178956025227 38.0 35.0 40.0 30.0 41.0 49 35.88132690805931 38.0 35.0 40.0 29.0 41.0 50 35.75362999727671 38.0 35.0 40.0 29.0 41.0 51 35.36827587077553 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 5.0 14 9.0 15 16.0 16 45.0 17 119.0 18 301.0 19 593.0 20 1032.0 21 1797.0 22 2808.0 23 4517.0 24 6564.0 25 9377.0 26 12070.0 27 13750.0 28 14702.0 29 17102.0 30 21412.0 31 27561.0 32 37190.0 33 51334.0 34 81552.0 35 128386.0 36 112950.0 37 192436.0 38 270430.0 39 100858.0 40 37.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.43461135448359 24.047616041783517 27.664357583813214 13.853415019919671 2 30.136507014718372 26.05888071101236 30.63165830142639 13.172953972842876 3 30.495854652221823 25.741193953942183 30.545811638715403 13.217139755120591 4 28.09268914670942 26.983355486341182 30.08005742348195 14.843897943467448 5 24.779837576671348 32.24173410258676 28.928431657219328 14.049996663522563 6 21.9820659828992 42.10841928520029 25.77645240469848 10.13306232720203 7 86.72397592686441 4.942134660229369 6.6000032463023715 1.7338861666038448 8 32.706316041963866 63.94007325822352 2.2827817925720995 1.0708289072405168 9 83.19100702103063 6.355177942457487 7.544406711189103 2.9094083253227816 10 52.3702516064688 25.33766053416102 12.0417979465334 10.25028991283678 11 46.881385521852124 20.90203921893965 18.946683090551996 13.26989216865623 12 41.743300443480976 22.115344730259327 22.2391550957028 13.902199730556902 13 22.408503869412076 37.98759912494116 23.49835971555177 16.10553729009499 14 15.590998364224303 42.60952212625591 26.53617733467754 15.263302174842238 15 14.532974316337738 24.658822638269935 46.00948280992719 14.798720235465131 16 17.20278749163626 19.319015937541142 44.86038194550901 18.617814625313585 17 17.448875246403368 19.37420307785535 28.02451679690952 35.15240487883177 18 21.653648392990153 25.791150940435763 31.90042147825789 20.654779188316198 19 29.34648326260602 25.416563716799796 24.842509247453005 20.394443773141177 20 32.13794260176707 23.879349368864712 23.820284700717977 20.16242332865024 21 23.972229686713785 27.59230770618078 26.99237299292847 21.443089614176962 22 22.83268737927813 25.081833872279645 25.796471269322264 26.289007479119963 23 21.453099046488852 30.484763119119457 24.77018884462295 23.291948989768738 24 21.17887667116941 25.524773795847256 35.00947739942324 18.286872133560095 25 19.70271084283027 25.99260203759579 32.52623643541572 21.778450684158223 26 17.532918407796895 35.215347074811035 26.155007331232856 21.09672718615921 27 20.28046248987785 32.578988848951354 28.758632008180683 18.381916652990114 28 15.92212120610954 30.041823195551842 36.60557606537331 17.430479532965297 29 17.339222366301936 27.52945568526738 34.747338482930765 20.383983465499924 30 19.646261251593845 29.00517063827715 30.950968209682276 20.39759990044673 31 30.165543385929443 27.018343411899863 23.124854592706278 19.691258609464416 32 29.77797095280778 28.55519705957145 24.750981555592027 16.91585043202874 33 26.924020292996826 28.700919966022038 24.09739267814535 20.27766706283579 34 20.635662074351146 29.13430133260712 27.174436450925825 23.055600142115903 35 20.992574985076025 26.569992984379876 28.935375137291537 23.50205689325256 36 30.027034484748693 26.452855573810997 25.01393204767736 18.506177893762953 37 22.12860046494264 32.65347345336236 26.414711520946767 18.803214560748234 38 21.440654887398395 33.50797237757382 22.03734329827928 23.014029436748505 39 22.174138873208445 29.70420774892376 25.87934215485944 22.24231122300835 40 23.692416457310223 26.517511096041858 25.654084840308975 24.135987606338947 41 17.715162215925996 26.22065477918832 27.702952512006814 28.361230492878875 42 23.203126549883947 27.605202740600603 23.29077671391239 25.900893995603063 43 23.836606387640966 27.484638677528554 24.262232698560986 24.416522236269493 44 21.32351747682952 31.34350027142695 26.769370055024826 20.563612196718708 45 19.362390144225998 35.42184797565995 22.521493226950803 22.694268653163252 46 23.24604988123944 31.791489998683442 24.821227931907007 20.141232188170115 47 23.569417667459604 27.79664440544874 25.85382261121742 22.780115315874237 48 24.360703870494177 24.700573693769083 28.886319901456687 22.052402534280052 49 21.039285669198183 25.46165124973624 30.018377678424894 23.480685402640685 50 19.57303909810506 31.857227621704777 26.74826908961057 21.821464190579594 51 19.45013048332032 32.71380057243132 24.28982626871809 23.546242675530273 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 990.0 1 1557.5 2 2125.0 3 5539.5 4 8954.0 5 6589.0 6 4224.0 7 4348.0 8 4472.0 9 4708.0 10 4944.0 11 4951.0 12 4958.0 13 4668.5 14 4379.0 15 4109.0 16 3839.0 17 3806.5 18 3774.0 19 3818.0 20 3862.0 21 4140.0 22 4418.0 23 4713.0 24 5008.0 25 6749.5 26 10802.0 27 13113.0 28 14973.5 29 16834.0 30 17994.0 31 19154.0 32 20750.0 33 22346.0 34 23577.0 35 24808.0 36 30086.0 37 35364.0 38 46814.5 39 58265.0 40 74705.5 41 91146.0 42 97493.0 43 103840.0 44 100542.0 45 97244.0 46 95267.5 47 93291.0 48 88601.0 49 83911.0 50 79548.0 51 75185.0 52 69373.5 53 63562.0 54 58655.0 55 53748.0 56 51904.5 57 50061.0 58 47569.0 59 45077.0 60 40057.0 61 35037.0 62 29103.5 63 23170.0 64 18859.0 65 14548.0 66 12018.5 67 9489.0 68 7923.0 69 6357.0 70 5171.5 71 3986.0 72 3273.0 73 2560.0 74 1976.0 75 1009.5 76 627.0 77 444.5 78 262.0 79 165.0 80 68.0 81 49.0 82 30.0 83 23.0 84 16.0 85 15.5 86 15.0 87 11.5 88 8.0 89 4.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1108954.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.843920804359676 #Duplication Level Percentage of deduplicated Percentage of total 1 77.06032566010373 16.83299650877472 2 5.613775867946807 2.4525375094571116 3 2.002656345273587 1.3123759981351388 4 1.1961936413966485 1.0451823667738804 5 0.8980624600779492 0.9808602627655572 6 0.7307183377094967 0.9577052099531757 7 0.6300886865751169 0.9634525158488902 8 0.5630904931830574 0.984008331102283 9 0.49874253184992295 0.9805043130745996 >10 9.41795730146301 50.404764974462054 >50 1.2756367026442217 18.035483865498897 >100 0.1065110877297286 3.6557921895834227 >500 0.0045766483008867756 0.6926237980563148 >1k 0.0016642357457770094 0.7017121565139492 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3070 0.27683745222975886 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1812 0.16339721936166873 No Hit AAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1598 0.14409975526487123 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1241 0.11190725674825104 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8035013174577124E-4 0.0 0.0 0.014969060934899013 0.0 2 1.8035013174577124E-4 0.0 0.0 0.04544823319993435 0.0 3 1.8035013174577124E-4 0.0 0.0 0.06411447183562168 0.0 4 1.8035013174577124E-4 0.0 0.0 0.11199743181412394 0.0 5 1.8035013174577124E-4 0.0 0.0 0.21605945783143393 0.0 6 1.8035013174577124E-4 0.0 0.0 0.30443102238686187 0.0 7 1.8035013174577124E-4 0.0 0.0 0.3643974411923308 0.0 8 1.8035013174577124E-4 0.0 0.0 0.49497093657626917 0.0 9 1.8035013174577124E-4 0.0 0.0 0.629151434595123 0.0 10 1.8035013174577124E-4 0.0 0.0 0.9155474438074077 0.0 11 1.8035013174577124E-4 0.0 0.0 1.1718249810181487 0.0 12 1.8035013174577124E-4 0.0 0.0 1.4257579665161946 0.0 13 1.8035013174577124E-4 0.0 0.0 1.5193596848922497 0.0 14 1.8035013174577124E-4 0.0 0.0 1.553986910187438 0.0 15 1.8035013174577124E-4 0.0 0.0 1.6124203528730678 0.0 16 1.8035013174577124E-4 0.0 0.0 1.7284756626514715 0.0 17 1.8035013174577124E-4 0.0 0.0 1.8663533383711137 0.0 18 1.8035013174577124E-4 0.0 0.0 2.0752889659985896 0.0 19 1.8035013174577124E-4 0.0 0.0 2.1659149072008397 0.0 20 1.8035013174577124E-4 0.0 0.0 2.2628531030141916 0.0 21 1.8035013174577124E-4 0.0 0.0 2.389639245631469 0.0 22 1.8035013174577124E-4 0.0 0.0 2.5254428948360346 0.0 23 1.8035013174577124E-4 0.0 0.0 2.680724358269144 0.0 24 1.8035013174577124E-4 0.0 0.0 2.7918200394245387 0.0 25 1.8035013174577124E-4 0.0 0.0 2.8819049302315514 0.0 26 1.8035013174577124E-4 0.0 0.0 2.9716291207750727 0.0 27 1.8035013174577124E-4 0.0 0.0 3.0578364837495515 0.0 28 1.8035013174577124E-4 0.0 0.0 3.1571192312755985 0.0 29 1.8035013174577124E-4 0.0 0.0 3.2564921538675184 0.0 30 1.8035013174577124E-4 0.0 0.0 3.3881477500419312 0.0 31 1.8035013174577124E-4 0.0 0.0 3.523320173785387 0.0 32 1.8035013174577124E-4 0.0 0.0 3.6378425074439518 0.0 33 1.8035013174577124E-4 0.0 0.0 3.754529042683466 0.0 34 1.8035013174577124E-4 0.0 0.0 3.872387853779327 0.0 35 1.8035013174577124E-4 0.0 0.0 4.034883322482267 0.0 36 1.8035013174577124E-4 0.0 0.0 4.178532202417774 0.0 37 1.8035013174577124E-4 0.0 0.0 4.306670971023144 0.0 38 1.8035013174577124E-4 0.0 0.0 4.440490768778506 0.0 39 1.8035013174577124E-4 0.0 0.0 4.568359012186258 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 25 3.8907157E-5 45.000004 45 CTATACG 25 3.8907157E-5 45.000004 1 AAACGCG 25 3.8907157E-5 45.000004 1 CGCTAAC 25 3.8907157E-5 45.000004 14 AACGATC 25 3.8907157E-5 45.000004 42 TCGTAAG 30 2.1654323E-6 45.000004 1 ATACGTT 25 3.8907157E-5 45.000004 10 GTGCGTT 25 3.8907157E-5 45.000004 44 GGTACGA 35 1.2118835E-7 45.0 2 CGACGGC 20 7.0331804E-4 45.0 15 TTCACGT 20 7.0331804E-4 45.0 26 TTCACGA 35 1.2118835E-7 45.0 2 ATTCGCG 20 7.0331804E-4 45.0 1 TTTCACG 20 7.0331804E-4 45.0 25 CATACGC 20 7.0331804E-4 45.0 32 TCGTAAA 20 7.0331804E-4 45.0 38 ACGTCGA 20 7.0331804E-4 45.0 2 GTTCACG 45 3.8562575E-10 45.0 1 ATCGGCA 20 7.0331804E-4 45.0 14 TCGACAC 35 1.2118835E-7 45.0 34 >>END_MODULE