##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546926_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 972573 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.799781610223604 31.0 31.0 34.0 30.0 34.0 2 32.1385983365773 33.0 31.0 34.0 30.0 34.0 3 32.16809123839547 33.0 31.0 34.0 30.0 34.0 4 35.88557465609265 37.0 35.0 37.0 35.0 37.0 5 35.87743953410181 37.0 35.0 37.0 35.0 37.0 6 35.92443343584492 37.0 35.0 37.0 35.0 37.0 7 36.155491670034024 37.0 35.0 37.0 35.0 37.0 8 13.291176086525125 0.0 0.0 37.0 0.0 37.0 9 25.034321331149435 18.0 17.0 39.0 17.0 39.0 10 32.793298806362095 32.0 32.0 38.0 27.0 39.0 11 35.67185496615678 37.0 35.0 37.0 32.0 39.0 12 36.61620772939409 37.0 35.0 39.0 33.0 39.0 13 36.736086648508646 39.0 35.0 39.0 33.0 39.0 14 37.90658696056749 40.0 37.0 41.0 33.0 41.0 15 38.26882506505938 40.0 37.0 41.0 33.0 41.0 16 38.409781065277365 40.0 37.0 41.0 34.0 41.0 17 38.40692369621612 40.0 37.0 41.0 34.0 41.0 18 38.375416549708866 40.0 37.0 41.0 34.0 41.0 19 38.32233364487807 40.0 37.0 41.0 34.0 41.0 20 38.289009668168866 40.0 37.0 41.0 34.0 41.0 21 38.198923885405 40.0 36.0 41.0 34.0 41.0 22 38.14535258535863 40.0 36.0 41.0 34.0 41.0 23 38.075213891399414 40.0 36.0 41.0 34.0 41.0 24 37.99232139901066 40.0 36.0 41.0 34.0 41.0 25 37.879975076421 40.0 35.0 41.0 33.0 41.0 26 37.80332581718802 40.0 35.0 41.0 33.0 41.0 27 37.73950541501769 40.0 35.0 41.0 33.0 41.0 28 37.72375029946338 40.0 35.0 41.0 33.0 41.0 29 37.7668185318737 40.0 36.0 41.0 33.0 41.0 30 37.69935213089403 40.0 36.0 41.0 33.0 41.0 31 37.59581542979293 40.0 35.0 41.0 33.0 41.0 32 37.44282537146312 40.0 35.0 41.0 33.0 41.0 33 37.325959079678334 40.0 35.0 41.0 33.0 41.0 34 37.20845633181263 40.0 35.0 41.0 33.0 41.0 35 37.094382632460494 40.0 35.0 41.0 32.0 41.0 36 36.977097863091 40.0 35.0 41.0 32.0 41.0 37 36.88042028721752 40.0 35.0 41.0 31.0 41.0 38 36.81653408021814 40.0 35.0 41.0 31.0 41.0 39 36.78317206009215 40.0 35.0 41.0 31.0 41.0 40 36.66096529515008 39.0 35.0 41.0 31.0 41.0 41 36.639637333135916 39.0 35.0 41.0 31.0 41.0 42 36.601057195706645 39.0 35.0 41.0 31.0 41.0 43 36.50765957928094 39.0 35.0 41.0 31.0 41.0 44 36.327263866054274 39.0 35.0 41.0 30.0 41.0 45 36.19824938590728 39.0 35.0 40.0 30.0 41.0 46 36.203787273551704 39.0 35.0 40.0 30.0 41.0 47 36.17310268740753 39.0 35.0 40.0 30.0 41.0 48 36.131976725654525 39.0 35.0 40.0 30.0 41.0 49 36.04308365541713 39.0 35.0 40.0 30.0 41.0 50 35.93311658867766 38.0 35.0 40.0 30.0 41.0 51 35.53594228916493 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 3.0 15 8.0 16 26.0 17 72.0 18 186.0 19 409.0 20 791.0 21 1464.0 22 2270.0 23 3656.0 24 5445.0 25 7859.0 26 10275.0 27 11560.0 28 12108.0 29 13650.0 30 17016.0 31 22562.0 32 30140.0 33 42832.0 34 68669.0 35 114273.0 36 98692.0 37 170985.0 38 245783.0 39 91810.0 40 26.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.13468500564996 23.555455477378047 29.878785448495897 13.431074068476093 2 31.391371136151218 24.86188697403691 31.5251400151968 12.221601874615068 3 28.708590511971856 25.02855826760562 33.304338080534826 12.958513139887701 4 24.916073137954683 27.316407097462093 32.97809007652896 14.789429688054264 5 23.46538511762099 31.771188383802553 30.437303935025955 14.3261225635505 6 19.946163424236534 41.71306421214654 27.861147697910592 10.479624665706327 7 87.96604470821214 4.288418452907905 6.179793187760714 1.5657436511192477 8 33.72836794770161 63.41385171087415 2.1197380556523777 0.7380422857718649 9 87.21741195776563 3.684659146408547 6.798461400840862 2.299467494984952 10 51.45156199071946 22.78636153789998 13.344705230352888 12.417371241027665 11 44.600662366732365 23.05451621626346 18.903465343989602 13.441356073014571 12 39.515491382137895 22.52602118298575 23.219439569060626 14.739047865815728 13 21.23192809177306 39.589418994769545 24.179264692727433 14.999388220729962 14 15.237519445841082 41.973815847242314 27.85590387559597 14.932760831320632 15 14.095702841843236 25.371771579099978 45.5677877136215 14.964737865435293 16 16.572329275026142 19.552876750639797 44.91251556438437 18.96227840994969 17 17.117481155656183 19.95983849027271 27.969520025746142 34.95316032832497 18 21.79044657830312 24.463253658080163 32.79075195383791 20.955547809778803 19 28.37905226651367 25.689896799520444 26.091306256702584 19.8397446772633 20 30.680781802497087 24.259464328127557 24.725341953765938 20.33441191560942 21 23.149110658017445 28.187190061825696 27.845621871057496 20.818077409099367 22 23.30344354613998 23.902987230778564 26.593170898225633 26.200398324855822 23 20.117358799802172 29.746044769904163 25.82736720019988 24.30922923009378 24 19.850849242164855 24.733361917305952 37.54196343102266 17.873825409506537 25 17.8139841430926 26.290263044522106 34.91007872930875 20.985674083076542 26 17.072445975777654 34.014104853825884 27.31938887877825 21.594060291618213 27 18.276777167369442 33.41846833091192 30.065403830869254 18.239350670849387 28 15.412313522995188 28.582224676193974 39.040462772460266 16.964999028350572 29 15.44274825642908 26.46546840185775 37.672339248570545 20.419444093142623 30 19.683663848369225 29.114626871196304 32.7287514664709 18.47295781396358 31 29.82562748503197 26.2943758463375 24.546332254751057 19.33366441387947 32 28.912791122106 27.271886017810488 26.743699444668934 17.071623415414575 33 26.48613523098009 27.494799876204667 25.584609073046444 20.4344558197688 34 20.15715015736608 27.864232299272135 28.14996920539641 23.828648337965376 35 19.768696025902425 26.039999054055585 31.087023801812308 23.104281118229686 36 30.22004517912794 24.69932848228359 26.534460652310933 18.546165686277533 37 21.195838255843004 31.087435081993846 29.060646347369296 18.65608031479385 38 20.24084567430928 32.82920665081181 24.54417303379798 22.38577464108093 39 20.44720550539651 29.877757248042048 28.076144412810145 21.598892833751297 40 22.986140886082588 25.706450826827393 26.838807986649844 24.468600300440173 41 18.00461250723596 24.499549134100988 28.541713578312372 28.954124780350675 42 22.085642928602788 26.401308693537658 24.550445056566446 26.962603321293106 43 22.0889331700551 26.922297863502276 26.001030256854758 24.987738709587866 44 20.608221696469055 30.46917814909523 28.462542143366104 20.460058011069606 45 18.581330141799125 36.24334625781304 23.6212603064243 21.554063293963537 46 23.12731280839587 31.189638207106306 26.16903821101347 19.514010773484355 47 22.078137065289702 28.361161578616723 27.06408670608787 22.496614650005707 48 23.081249428063497 25.250649565636717 30.060982568917705 21.607118437382077 49 20.722968867118457 25.68629809793198 30.811466080181127 22.779266954768435 50 19.91223280925956 31.166298056803964 28.125909314776372 20.795559819160104 51 18.876115211917256 32.85254680111416 25.604042061624167 22.667295925344423 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 902.0 1 1278.5 2 1655.0 3 5112.5 4 8570.0 5 6164.5 6 3759.0 7 4076.0 8 4393.0 9 4675.5 10 4958.0 11 4823.5 12 4689.0 13 4555.0 14 4421.0 15 4305.0 16 4189.0 17 3858.5 18 3528.0 19 3569.0 20 3610.0 21 3786.0 22 3962.0 23 4443.0 24 4924.0 25 5765.0 26 8573.5 27 10541.0 28 12392.0 29 14243.0 30 15925.0 31 17607.0 32 19716.0 33 21825.0 34 24401.5 35 26978.0 36 31161.0 37 35344.0 38 47530.0 39 59716.0 40 71882.0 41 84048.0 42 88181.5 43 92315.0 44 90383.0 45 88451.0 46 86706.0 47 84961.0 48 81025.0 49 77089.0 50 72184.0 51 67279.0 52 60360.5 53 53442.0 54 48731.0 55 44020.0 56 40706.5 57 37393.0 58 33875.0 59 30357.0 60 25847.5 61 21338.0 62 18283.5 63 15229.0 64 13198.0 65 11167.0 66 9179.0 67 7191.0 68 5959.5 69 4728.0 70 3975.0 71 3222.0 72 2644.5 73 2067.0 74 1531.0 75 711.0 76 427.0 77 324.0 78 221.0 79 184.5 80 148.0 81 93.0 82 38.0 83 29.5 84 21.0 85 12.5 86 4.0 87 3.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 972573.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.369527748571425 #Duplication Level Percentage of deduplicated Percentage of total 1 75.84375983576308 16.96589090202089 2 5.658152465422438 2.5314039716183006 3 2.2596903713197216 1.5164461939324854 4 1.421707518714074 1.2721170316090842 5 1.05608656108418 1.1812078816532967 6 0.8446737440874178 1.1336971654111927 7 0.7505526921515631 1.1752656491694562 8 0.7005784774878673 1.2537287753773414 9 0.5852251232555666 1.178208867044388 >10 9.624787318883246 51.261470370356996 >50 1.1655874840591245 16.72621005016176 >100 0.08642540027626647 2.9267197425627134 >500 0.0013865037477475903 0.210594797258831 >1k 0.0013865037477475903 0.6670386018232585 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3305 0.3398202499966584 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1830 0.1881606830541255 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1317 0.13541399977173948 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008431243721550978 0.0 2 0.0 0.0 0.0 0.03413625506774299 0.0 3 0.0 0.0 0.0 0.05295232337315554 0.0 4 0.0 0.0 0.0 0.08143347594473628 0.0 5 0.0 0.0 0.0 0.1408634621771322 0.0 6 0.0 0.0 0.0 0.20378932995261023 0.0 7 0.0 0.0 0.0 0.24615118865113467 0.0 8 0.0 0.0 0.0 0.3409512704958908 0.0 9 0.0 0.0 0.0 0.43595699243141645 0.0 10 0.0 0.0 0.0 0.6371758212494075 0.0 11 0.0 0.0 0.0 0.8737647456797587 0.0 12 0.0 0.0 0.0 1.094416563075471 0.0 13 0.0 0.0 0.0 1.177289519655594 0.0 14 0.0 0.0 0.0 1.2132765355402628 0.0 15 0.0 0.0 0.0 1.2567694147380197 0.0 16 0.0 0.0 0.0 1.3690489042981864 0.0 17 0.0 0.0 0.0 1.4921244986237536 0.0 18 0.0 0.0 0.0 1.6607493730547733 0.0 19 0.0 0.0 0.0 1.7476323114049022 0.0 20 0.0 0.0 0.0 1.8330757691196444 0.0 21 0.0 0.0 0.0 1.9586190445344462 0.0 22 0.0 0.0 0.0 2.0847792402215566 0.0 23 0.0 0.0 0.0 2.234382406256394 0.0 24 0.0 0.0 0.0 2.3369968115503927 0.0 25 0.0 0.0 0.0 2.428506651942836 0.0 26 0.0 0.0 0.0 2.5220728932429752 0.0 27 0.0 0.0 0.0 2.6060768703223305 0.0 28 0.0 0.0 0.0 2.701699512530165 0.0 29 0.0 0.0 0.0 2.8028744371887764 0.0 30 0.0 0.0 0.0 2.921014669335875 0.0 31 0.0 0.0 0.0 3.0439874436160577 0.0 32 0.0 0.0 0.0 3.15143439104314 0.0 33 0.0 0.0 0.0 3.261451839604842 0.0 34 0.0 0.0 0.0 3.3826766731134836 0.0 35 0.0 0.0 0.0 3.5389631420983307 0.0 36 0.0 0.0 0.0 3.6622443765146677 0.0 37 0.0 0.0 0.0 3.7793564082079185 0.0 38 0.0 0.0 0.0 3.905825064031183 0.0 39 0.0 0.0 0.0 4.0394911230313815 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAC 35 1.2116652E-7 45.000004 6 GTGTCGA 35 1.2116652E-7 45.000004 2 CCTTACG 20 7.032752E-4 45.0 39 ACACGTA 20 7.032752E-4 45.0 10 ACCGGCA 20 7.032752E-4 45.0 31 CGAACAG 25 3.8903614E-5 45.0 16 ACCGCGA 20 7.032752E-4 45.0 2 TCGATAC 45 3.8380676E-10 45.0 31 TCTAGCG 20 7.032752E-4 45.0 1 CCGTCTA 25 3.8903614E-5 45.0 16 ATCCGAT 20 7.032752E-4 45.0 41 GCGTAAG 55 1.8189894E-12 45.0 1 CACGATA 30 2.1651558E-6 44.999996 35 TTCGCGA 65 0.0 44.999996 2 CGACGGT 185 0.0 43.783783 28 TCACGAC 180 0.0 43.75 25 AACGCCG 120 0.0 43.124996 13 ATTGCGA 120 0.0 43.124996 2 CGTAAGA 105 0.0 42.857143 2 CGTTTTT 3025 0.0 42.842976 1 >>END_MODULE