##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546924_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1043926 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.84236909512743 31.0 31.0 34.0 30.0 34.0 2 32.18346990112326 33.0 31.0 34.0 30.0 34.0 3 32.19869894992557 33.0 31.0 34.0 30.0 34.0 4 35.917596649570946 37.0 35.0 37.0 35.0 37.0 5 35.89671490124779 37.0 35.0 37.0 35.0 37.0 6 35.94005801177478 37.0 35.0 37.0 35.0 37.0 7 36.16462277977558 37.0 35.0 37.0 35.0 37.0 8 13.13061653795384 0.0 0.0 37.0 0.0 37.0 9 24.931197230455034 18.0 17.0 39.0 17.0 39.0 10 32.899402831235165 32.0 32.0 38.0 27.0 39.0 11 35.76051655002366 37.0 35.0 37.0 32.0 39.0 12 36.54324061284037 37.0 35.0 39.0 33.0 39.0 13 36.50497640637363 39.0 35.0 39.0 33.0 39.0 14 37.66856175629307 39.0 36.0 41.0 33.0 41.0 15 38.08609230922498 40.0 36.0 41.0 33.0 41.0 16 38.26095623636158 40.0 36.0 41.0 34.0 41.0 17 38.28083599795388 40.0 36.0 41.0 34.0 41.0 18 38.24396556844067 40.0 36.0 41.0 34.0 41.0 19 38.190152367121804 40.0 36.0 41.0 34.0 41.0 20 38.146534332893324 40.0 36.0 41.0 34.0 41.0 21 38.03545653619126 40.0 36.0 41.0 34.0 41.0 22 37.98939196839623 40.0 36.0 41.0 34.0 41.0 23 37.909595124558635 40.0 35.0 41.0 34.0 41.0 24 37.835473012454905 40.0 35.0 41.0 34.0 41.0 25 37.7184675925305 40.0 35.0 41.0 33.0 41.0 26 37.629499600546396 40.0 35.0 41.0 33.0 41.0 27 37.55145383868205 40.0 35.0 41.0 33.0 41.0 28 37.56222088538843 40.0 35.0 41.0 33.0 41.0 29 37.6353611271297 40.0 35.0 41.0 33.0 41.0 30 37.55957893567169 40.0 35.0 41.0 33.0 41.0 31 37.42791155694944 40.0 35.0 41.0 33.0 41.0 32 37.25231098756042 40.0 35.0 41.0 33.0 41.0 33 37.12038018020434 40.0 35.0 41.0 33.0 41.0 34 37.01459777800342 40.0 35.0 41.0 32.0 41.0 35 36.909840352668674 40.0 35.0 41.0 32.0 41.0 36 36.77713937577951 40.0 35.0 41.0 31.0 41.0 37 36.65729467414357 39.0 35.0 41.0 31.0 41.0 38 36.61074060805076 39.0 35.0 41.0 31.0 41.0 39 36.55707301092223 39.0 35.0 41.0 31.0 41.0 40 36.419455018842335 39.0 35.0 41.0 30.0 41.0 41 36.404812218490584 39.0 35.0 41.0 31.0 41.0 42 36.3677272143811 39.0 35.0 41.0 31.0 41.0 43 36.25743970358052 39.0 35.0 41.0 30.0 41.0 44 36.05691782750885 39.0 35.0 40.0 30.0 41.0 45 35.95402643482392 38.0 35.0 40.0 30.0 41.0 46 35.95381760776147 38.0 35.0 40.0 30.0 41.0 47 35.93163883263756 38.0 35.0 40.0 30.0 41.0 48 35.91844536873303 38.0 35.0 40.0 30.0 41.0 49 35.85704925444907 38.0 35.0 40.0 29.0 41.0 50 35.70931177114087 38.0 35.0 40.0 29.0 41.0 51 35.25472974138014 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 0.0 13 1.0 14 3.0 15 17.0 16 40.0 17 122.0 18 273.0 19 543.0 20 989.0 21 1636.0 22 2698.0 23 4284.0 24 6265.0 25 9213.0 26 11627.0 27 13004.0 28 13458.0 29 15337.0 30 18958.0 31 24862.0 32 33394.0 33 47796.0 34 80358.0 35 135094.0 36 102274.0 37 178126.0 38 260974.0 39 82551.0 40 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.60796263336673 22.694712077292838 30.359623191682168 14.337702097658264 2 30.25702971283405 26.258949389132948 30.823736548376036 12.660284349656967 3 28.73948919751017 25.326699402064897 33.099280983517986 12.834530416906945 4 25.680172732550012 28.000356347097398 31.51880497276627 14.800665947586323 5 24.08245412031121 31.148472209716015 30.486164728151227 14.282908941821546 6 21.628544552008474 40.52030507909564 27.18162015315262 10.669530215743261 7 87.69031521391362 4.329713025635916 6.295561179623843 1.68441058082661 8 32.981456540022954 64.00463251226618 2.1119313054756756 0.9019796422351776 9 86.08158049516919 4.571971576529371 6.907194571262713 2.439253357038717 10 58.46084875747898 21.254763268660806 11.088717016340238 9.195670957519978 11 53.07368529953273 18.664732940840633 16.940472792132777 11.321108967493865 12 46.6098171709489 21.3415510294791 19.873726681776294 12.174905117795706 13 20.621959794085022 46.45942336908938 20.12288227326458 12.795734563561018 14 13.555845912449731 46.81433358303175 26.51069137084429 13.119129133674226 15 12.348001678279878 23.11897586610545 51.94573178558633 12.587290670028336 16 13.974553751894291 17.75087506202547 49.82604130944147 18.448529876638766 17 14.7264269689614 16.970934721426616 27.3346003452352 40.968037964376784 18 22.419022037960545 22.37064696156624 34.29304375980673 20.917287240666486 19 28.890170376061135 24.71899349187586 24.899561846337768 21.491274285725233 20 33.49308284303677 22.692892024913643 23.171661592871526 20.642363539178064 21 22.259719558666035 27.84095807557241 27.961081532599053 21.938240833162503 22 22.752474792274548 24.136768314995507 25.045836582286483 28.06492031044346 23 18.804972766268875 30.138055762573206 23.972867808637776 27.084103662520143 24 20.433536476723447 23.120604334023675 39.90761797292145 16.538241216331425 25 15.603309046809832 25.01163875600378 37.313564371420966 22.07148782576543 26 15.481365537403994 37.22486076599299 26.72861869519487 20.565155001408144 27 16.35949291424871 35.67408034669124 29.42210463193751 18.544322107122536 28 13.093265231443606 29.039510463385337 41.29066619664612 16.57655810852493 29 13.861135751001507 24.663242413734306 39.615355877715466 21.860265957548716 30 17.974837296896524 29.930952960267298 32.99026942522746 19.10394031760872 31 30.862053440569543 26.456856137312414 23.75771845897123 18.923371963146813 32 30.828813536591674 27.5547308908869 26.411642204524078 15.20481336799735 33 28.034841550071555 28.76717315211998 24.49129536001594 18.706689937792525 34 19.777742866831556 29.20484785320032 27.531357586648863 23.486051693319258 35 19.549278397127765 26.786572994637552 30.68531677532699 22.978831832907694 36 32.234085557788575 23.498313098821182 26.939553186720133 17.32804815667011 37 20.457867703266324 31.905326622768282 29.598266543797163 18.03853913016823 38 20.723212181706366 32.71237616459404 23.112461994432557 23.451949659267036 39 20.234959182930588 31.591128106781515 27.74142994809977 20.432482762188126 40 24.112916049605047 25.691572007977577 25.540411868274187 24.655100074143185 41 17.288102796558377 23.424936250270616 28.457572663196434 30.829388289974574 42 23.746127599082694 24.966807992137376 24.298561392282593 26.98850301649734 43 23.514789362464388 26.094378337161828 25.327369947678285 25.0634623526955 44 19.355394922628616 32.48898868310589 27.5358598214816 20.619756572783896 45 17.3847571571165 39.84429930857168 20.7855729237513 21.985370610560516 46 23.961564325440694 31.91394792351182 25.270660947231892 18.853826803815597 47 22.62775330818468 28.577025574609692 26.30914451790644 22.486076599299185 48 24.60749133559275 23.720263696852076 29.51090402959597 22.161340937959203 49 21.068160003678422 23.05460348722036 32.22009989213795 23.65713661696327 50 20.04184204627531 33.23770075656704 26.840216643708466 19.88024055344919 51 17.917457750836746 35.002097849847594 23.96482126127714 23.115623138038522 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1327.0 1 1676.5 2 2026.0 3 4628.5 4 7231.0 5 5557.0 6 3883.0 7 4193.5 8 4504.0 9 4913.5 10 5323.0 11 5301.5 12 5280.0 13 5047.0 14 4814.0 15 4601.5 16 4389.0 17 4107.0 18 3825.0 19 3931.0 20 4037.0 21 4010.0 22 3983.0 23 4412.5 24 4842.0 25 5633.0 26 7001.5 27 7579.0 28 8887.5 29 10196.0 30 12019.0 31 13842.0 32 16285.5 33 18729.0 34 21259.5 35 23790.0 36 28950.0 37 34110.0 38 48526.5 39 62943.0 40 81312.0 41 99681.0 42 107947.0 43 116213.0 44 112119.5 45 108026.0 46 102580.0 47 97134.0 48 90390.5 49 83647.0 50 77398.0 51 71149.0 52 63783.0 53 56417.0 54 49703.5 55 42990.0 56 39021.0 57 35052.0 58 32258.0 59 29464.0 60 26550.5 61 23637.0 62 20233.5 63 16830.0 64 14151.0 65 11472.0 66 9288.5 67 7105.0 68 5835.5 69 4566.0 70 3769.0 71 2972.0 72 2550.0 73 2128.0 74 1753.5 75 1011.0 76 643.0 77 431.5 78 220.0 79 138.0 80 56.0 81 38.5 82 21.0 83 15.0 84 9.0 85 15.5 86 22.0 87 16.5 88 11.0 89 6.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1043926.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.65060049726194 #Duplication Level Percentage of deduplicated Percentage of total 1 79.55917581614479 15.633855798544852 2 5.339752635003081 2.0985869156929464 3 1.7607832874057434 1.0380134682919746 4 0.9526200626992609 0.7487822511111919 5 0.6644334513000966 0.6528258154257572 6 0.5564646568656084 0.6560918797747213 7 0.466717528750686 0.6419895791784367 8 0.37708274076354265 0.5927921834525572 9 0.33909173153970207 0.5997020533570333 >10 7.386257307263336 38.40664054535162 >50 2.3133528476015504 30.957713085333843 >100 0.2823074661477116 7.310483337970373 >500 0.0 0.0 >1k 0.001960468514914664 0.6625230865146986 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2583 0.24743133133957768 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1862 0.1783651331607796 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1382 0.13238486252857 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1052 0.10077342646892595 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9158446096753984E-4 0.0 0.0 0.017146809256594817 0.0 2 1.9158446096753984E-4 0.0 0.0 0.05488894806720017 0.0 3 1.9158446096753984E-4 0.0 0.0 0.08094443475878559 0.0 4 1.9158446096753984E-4 0.0 0.0 0.12634995200809251 0.0 5 1.9158446096753984E-4 0.0 0.0 0.20346269754752733 0.0 6 1.9158446096753984E-4 0.0 0.0 0.2827786643880888 0.0 7 1.9158446096753984E-4 0.0 0.0 0.3232987778827235 0.0 8 1.9158446096753984E-4 0.0 0.0 0.40721277178650594 0.0 9 1.9158446096753984E-4 0.0 0.0 0.49764063736318476 0.0 10 1.9158446096753984E-4 0.0 0.0 0.677825822903156 0.0 11 1.9158446096753984E-4 0.0 0.0 0.9077271760642038 0.0 12 1.9158446096753984E-4 0.0 0.0 1.1102319513068934 0.0 13 1.9158446096753984E-4 0.0 0.0 1.1920385161400329 0.0 14 1.9158446096753984E-4 0.0 0.0 1.2247994589654823 0.0 15 1.9158446096753984E-4 0.0 0.0 1.280263160415585 0.0 16 1.9158446096753984E-4 0.0 0.0 1.3899452643195016 0.0 17 1.9158446096753984E-4 0.0 0.0 1.5255870626845198 0.0 18 1.9158446096753984E-4 0.0 0.0 1.7198537061056052 0.0 19 1.9158446096753984E-4 0.0 0.0 1.7970622438755237 0.0 20 1.9158446096753984E-4 0.0 0.0 1.876857171868504 0.0 21 1.9158446096753984E-4 0.0 0.0 1.985581353467583 0.0 22 1.9158446096753984E-4 0.0 0.0 2.0941139506056943 0.0 23 1.9158446096753984E-4 0.0 0.0 2.234162191572966 0.0 24 1.9158446096753984E-4 0.0 0.0 2.3259311483764176 0.0 25 1.9158446096753984E-4 0.0 0.0 2.394422593172313 0.0 26 1.9158446096753984E-4 0.0 0.0 2.469715286332556 0.0 27 1.9158446096753984E-4 0.0 0.0 2.5338002885261983 0.0 28 1.9158446096753984E-4 0.0 0.0 2.608422436073055 0.0 29 1.9158446096753984E-4 0.0 0.0 2.6855351816124897 0.0 30 1.9158446096753984E-4 0.0 0.0 2.7951214932859227 0.0 31 1.9158446096753984E-4 0.0 0.0 2.898577102208394 0.0 32 1.9158446096753984E-4 0.0 0.0 2.9858438241791085 0.0 33 1.9158446096753984E-4 0.0 0.0 3.073493715071758 0.0 34 1.9158446096753984E-4 0.0 0.0 3.164687918492307 0.0 35 1.9158446096753984E-4 0.0 0.0 3.2910378705003995 0.0 36 1.9158446096753984E-4 0.0 0.0 3.389033322285296 0.0 37 1.9158446096753984E-4 0.0 0.0 3.4861666439958388 0.0 38 1.9158446096753984E-4 0.0 0.0 3.582150458940576 0.0 39 1.9158446096753984E-4 0.0 0.0 3.6757394681232194 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATA 20 7.0329884E-4 45.000004 26 GATACGA 45 3.8562575E-10 45.000004 2 GGTACGC 20 7.0329884E-4 45.000004 45 GGTACGA 20 7.0329884E-4 45.000004 2 CGTATTT 20 7.0329884E-4 45.000004 23 TTAATCG 40 6.8139343E-9 45.000004 10 ACGTTGT 20 7.0329884E-4 45.000004 20 ACCGACA 20 7.0329884E-4 45.000004 27 CGACATA 20 7.0329884E-4 45.000004 29 AAGCGAT 20 7.0329884E-4 45.000004 45 CGTTCCC 20 7.0329884E-4 45.000004 19 TCGGCCA 20 7.0329884E-4 45.000004 13 GTTACAC 20 7.0329884E-4 45.000004 33 TTCCCGC 20 7.0329884E-4 45.000004 29 GCCGAAC 20 7.0329884E-4 45.000004 37 GTTAACG 20 7.0329884E-4 45.000004 27 TACGAAC 20 7.0329884E-4 45.000004 34 TCGTATT 20 7.0329884E-4 45.000004 22 AACTCCG 30 2.1653086E-6 45.000004 43 CGCACGA 30 2.1653086E-6 45.000004 39 >>END_MODULE