##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546922_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 629436 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.220192362686596 33.0 31.0 34.0 31.0 34.0 2 32.61230847933706 34.0 31.0 34.0 31.0 34.0 3 32.633201786996615 34.0 31.0 34.0 31.0 34.0 4 36.253266416283786 37.0 35.0 37.0 35.0 37.0 5 36.267893796986506 37.0 35.0 37.0 35.0 37.0 6 36.31611633271691 37.0 37.0 37.0 35.0 37.0 7 36.41645377766763 37.0 37.0 37.0 35.0 37.0 8 14.700946561683793 0.0 0.0 37.0 0.0 37.0 9 25.9214312495631 19.0 17.0 39.0 17.0 39.0 10 33.61337451305613 32.0 32.0 39.0 27.0 39.0 11 36.32247281693453 37.0 35.0 39.0 34.0 39.0 12 37.23035701802884 39.0 37.0 39.0 35.0 39.0 13 37.33622798823073 39.0 37.0 39.0 35.0 39.0 14 38.62762695492473 40.0 38.0 41.0 35.0 41.0 15 38.91153826600321 40.0 38.0 41.0 35.0 41.0 16 39.01798912041892 40.0 38.0 41.0 35.0 41.0 17 39.02347339523001 40.0 38.0 41.0 35.0 41.0 18 38.98026646076805 40.0 38.0 41.0 35.0 41.0 19 38.95057956646903 40.0 38.0 41.0 35.0 41.0 20 38.912389821999376 40.0 38.0 41.0 35.0 41.0 21 38.847279151494355 40.0 38.0 41.0 35.0 41.0 22 38.797858717963386 40.0 38.0 41.0 35.0 41.0 23 38.69160168786024 40.0 38.0 41.0 35.0 41.0 24 38.595750799128105 40.0 37.0 41.0 35.0 41.0 25 38.50780063421857 40.0 37.0 41.0 35.0 41.0 26 38.465489740021226 40.0 37.0 41.0 35.0 41.0 27 38.43708335716419 40.0 37.0 41.0 35.0 41.0 28 38.41769615973665 40.0 37.0 41.0 35.0 41.0 29 38.452816489682824 40.0 37.0 41.0 35.0 41.0 30 38.38340037748079 40.0 37.0 41.0 35.0 41.0 31 38.31001881049066 40.0 37.0 41.0 35.0 41.0 32 38.14317420675017 40.0 37.0 41.0 34.0 41.0 33 38.00021288899904 40.0 37.0 41.0 34.0 41.0 34 37.872083897330306 40.0 37.0 41.0 34.0 41.0 35 37.74213105065487 40.0 36.0 41.0 34.0 41.0 36 37.644310144319675 40.0 36.0 41.0 34.0 41.0 37 37.56658500625957 40.0 36.0 41.0 33.0 41.0 38 37.508900031138985 40.0 36.0 41.0 33.0 41.0 39 37.46520694717175 40.0 36.0 41.0 33.0 41.0 40 37.3508172395605 40.0 36.0 41.0 33.0 41.0 41 37.33396564543496 40.0 36.0 41.0 33.0 41.0 42 37.284130554973025 40.0 36.0 41.0 33.0 41.0 43 37.19733856976722 40.0 35.0 41.0 33.0 41.0 44 37.014041141593424 40.0 35.0 41.0 33.0 41.0 45 36.93547874605202 40.0 35.0 41.0 33.0 41.0 46 36.90830203547303 40.0 35.0 41.0 33.0 41.0 47 36.867840415864364 40.0 35.0 41.0 33.0 41.0 48 36.8347107569316 40.0 35.0 41.0 32.0 41.0 49 36.78189680920697 40.0 35.0 41.0 32.0 41.0 50 36.66469188289199 39.0 35.0 41.0 32.0 41.0 51 36.27543229176596 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 2.0 14 2.0 15 1.0 16 17.0 17 52.0 18 68.0 19 130.0 20 272.0 21 524.0 22 921.0 23 1664.0 24 2728.0 25 4271.0 26 5841.0 27 6162.0 28 5653.0 29 5550.0 30 6096.0 31 7827.0 32 11126.0 33 17557.0 34 34305.0 35 66509.0 36 55143.0 37 117650.0 38 198040.0 39 81305.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.58833622481078 24.179900736532385 30.992666450600222 14.23909658805661 2 30.016236757986515 26.17184272904632 30.642193964120263 13.169726548846905 3 28.843281922228787 25.065773168360245 33.21830972489657 12.872635184514392 4 25.394956754936164 27.83396564543496 33.080885109844374 13.690192489784506 5 23.95557292560324 30.986788172268508 31.11086750678385 13.946771395344404 6 20.45211903990239 41.16987271144326 27.686055452818074 10.691952795836272 7 87.98257487655616 3.8793459541557835 6.730946434585883 1.4071327347021778 8 36.946091421526575 59.970036667746996 2.2769590554083337 0.8069128553180942 9 87.29926473859138 3.712529947445014 6.502170196811114 2.4860351171524986 10 49.01324360220896 25.694272332691487 13.716883050858227 11.575601014241322 11 42.18745035237895 26.005503339497583 19.571966014018898 12.235080294104565 12 37.24747234031736 23.680088205949453 24.976804631447834 14.095634822285346 13 20.553320750640257 38.035638253928916 26.428262762218875 14.982778233211954 14 14.970386186999155 40.627164636277556 29.528657401229037 14.873791775494253 15 13.933902731969571 25.402900374303343 45.626878665980335 15.036318227746746 16 16.512719323330728 22.160950438170044 43.81239713012919 17.513933108370033 17 17.243691177498587 21.71642549838268 28.889990404107806 32.14989292001093 18 21.299862098767786 25.365247618502913 34.094332068709136 19.24055821402017 19 25.878564302010055 26.663235023100047 27.56086401159133 19.897336663298574 20 28.9074663667156 25.376050940842276 26.091929918212497 19.624552774229628 21 22.64138053749706 27.849694011781978 30.22277086153318 19.28615458918778 22 22.599755972013043 24.129379317357124 28.776237774769793 24.49462693586004 23 19.380207042495186 28.908578473427006 28.041929600467718 23.66928488361009 24 19.481091008458364 25.84742531409071 37.06190939190005 17.609574285550874 25 17.59352817442917 26.58062138168138 36.247370661989464 19.578479781899986 26 16.524952497156185 35.06377137627972 28.725716355594532 19.685559770969565 27 17.422104868485437 33.73782243151011 31.395884569678252 17.444188130326197 28 14.752095526789061 29.35659860573593 39.29613177511296 16.59517409236205 29 16.211497276927282 25.725729065385522 38.00592911749566 20.056844540191538 30 17.941776447486323 30.084075267382225 33.66617098481816 18.307977300313297 31 28.189204303535227 26.23110212952548 26.66164629922661 18.91804726771268 32 27.695905540833383 27.638075991840317 27.991884798454493 16.674133668871814 33 25.423712657045357 27.974726580621383 27.209438290787308 19.392122471545957 34 19.79772367643414 29.216314287711537 28.393037576497054 22.592924459357267 35 19.568629693884684 27.1179277956774 30.86858711608488 22.444855394353038 36 27.80060244409281 25.162526452252493 28.884906487712808 18.15196461594189 37 20.43400758774522 31.169332545326295 29.630176856741592 18.766483010186896 38 19.810751212196315 32.927891000832496 24.80839990086363 22.452957886107562 39 19.97740834651974 30.440584904581243 28.502818396151476 21.07918835274754 40 23.155332710553576 26.85912467669469 26.64623567765428 23.339306935097454 41 17.860116040391716 25.27246614429426 29.258256597970245 27.609161217343782 42 22.126316257729144 26.71566291092343 26.073818466055325 25.084202365292104 43 22.41784708850463 26.71073786691578 26.855788356560478 24.015626688019115 44 19.439307570587 30.455995526153572 29.49831277524641 20.606384128013016 45 18.361835039622772 36.09056361568134 24.80919426280035 20.738407081895538 46 22.783730196556917 31.39318373909341 26.9655691762149 18.857516888134775 47 21.525460888795685 28.246080618204232 27.74197853316302 22.486479959837062 48 22.380829822253574 26.160245044770235 30.3227015931723 21.13622353980389 49 20.59589855044834 24.911349207862276 32.17976092883153 22.31299131285786 50 20.198717582089362 30.834906169968036 28.96767900151882 19.998697246423784 51 19.253109132620313 33.097884455290135 26.573789869025603 21.07521654306395 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 760.0 1 991.5 2 1223.0 3 3680.5 4 6138.0 5 4422.5 6 2707.0 7 2874.5 8 3042.0 9 3188.0 10 3334.0 11 3396.0 12 3458.0 13 3334.0 14 3210.0 15 3031.0 16 2852.0 17 2810.5 18 2769.0 19 2960.5 20 3152.0 21 3495.5 22 3839.0 23 4418.5 24 4998.0 25 5725.5 26 7549.0 27 8645.0 28 10008.5 29 11372.0 30 12938.0 31 14504.0 32 16506.5 33 18509.0 34 20165.0 35 21821.0 36 24343.5 37 26866.0 38 32876.5 39 38887.0 40 46974.0 41 55061.0 42 57465.5 43 59870.0 44 57566.0 45 55262.0 46 53877.5 47 52493.0 48 49359.5 49 46226.0 50 42384.0 51 38542.0 52 34964.0 53 31386.0 54 28392.5 55 25399.0 56 22948.0 57 20497.0 58 18642.0 59 16787.0 60 15258.0 61 13729.0 62 11626.5 63 9524.0 64 7695.5 65 5867.0 66 4878.5 67 3890.0 68 3272.5 69 2655.0 70 2186.0 71 1717.0 72 1370.5 73 1024.0 74 791.5 75 400.0 76 241.0 77 164.0 78 87.0 79 63.0 80 39.0 81 34.5 82 30.0 83 18.5 84 7.0 85 3.5 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 629436.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.070715461632705 #Duplication Level Percentage of deduplicated Percentage of total 1 70.09767751438966 16.873012499701627 2 5.523226128227175 2.658960091256233 3 2.7627419466092884 1.9950352587224833 4 1.920475085205434 1.8490883730853929 5 1.6266338961765294 1.957712083755612 6 1.3556373130137347 1.957869601843555 7 1.244246153188392 2.096492658234019 8 1.1975265777073278 2.30602572077887 9 1.075445777477204 2.3298074373661324 >10 13.005369009461724 61.880740668226906 >50 0.1664797577584382 2.521716982301908 >100 0.02122451094928296 0.751007070892572 >500 0.001989797901495277 0.26342722512175676 >1k 0.001326531934330185 0.5591043287129649 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2081 0.33061343806201104 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1421 0.2257576624152416 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007943619367179506 0.0 2 0.0 0.0 0.0 0.03272771179277957 0.0 3 0.0 0.0 0.0 0.04845607813979499 0.0 4 0.0 0.0 0.0 0.0886507921377233 0.0 5 0.0 0.0 0.0 0.17444188130326196 0.0 6 0.0 0.0 0.0 0.23894407056475955 0.0 7 0.0 0.0 0.0 0.28326946663362124 0.0 8 0.0 0.0 0.0 0.37096702444728297 0.0 9 0.0 0.0 0.0 0.440712002491119 0.0 10 0.0 0.0 0.0 0.6656753029696426 0.0 11 0.0 0.0 0.0 0.8625181908883508 0.0 12 0.0 0.0 0.0 1.0646038675893974 0.0 13 0.0 0.0 0.0 1.1311713978863618 0.0 14 0.0 0.0 0.0 1.1580208313474285 0.0 15 0.0 0.0 0.0 1.2067946542619106 0.0 16 0.0 0.0 0.0 1.2914736367160442 0.0 17 0.0 0.0 0.0 1.387273686284229 0.0 18 0.0 0.0 0.0 1.5226329603009678 0.0 19 0.0 0.0 0.0 1.5963497480283937 0.0 20 0.0 0.0 0.0 1.6743560902140964 0.0 21 0.0 0.0 0.0 1.7707916293316557 0.0 22 0.0 0.0 0.0 1.862937613990938 0.0 23 0.0 0.0 0.0 1.9839983731467536 0.0 24 0.0 0.0 0.0 2.0674063765021384 0.0 25 0.0 0.0 0.0 2.132385182925667 0.0 26 0.0 0.0 0.0 2.202130160969503 0.0 27 0.0 0.0 0.0 2.27235175617537 0.0 28 0.0 0.0 0.0 2.3503580983610726 0.0 29 0.0 0.0 0.0 2.4297942920328675 0.0 30 0.0 0.0 0.0 2.5254354692137087 0.0 31 0.0 0.0 0.0 2.6287025209870425 0.0 32 0.0 0.0 0.0 2.7157645892513296 0.0 33 0.0 0.0 0.0 2.80870493584733 0.0 34 0.0 0.0 0.0 2.9095889018105097 0.0 35 0.0 0.0 0.0 3.0339859811005407 0.0 36 0.0 0.0 0.0 3.1356643090004384 0.0 37 0.0 0.0 0.0 3.240520084647208 0.0 38 0.0 0.0 0.0 3.347123456554757 0.0 39 0.0 0.0 0.0 3.4434001232849725 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 20 7.030851E-4 45.000004 39 CGAACAC 20 7.030851E-4 45.000004 44 ACGTTAG 40 6.8066583E-9 45.000004 1 GTTTACG 60 0.0 45.000004 1 TTCACGA 40 6.8066583E-9 45.000004 2 TCGCTCA 20 7.030851E-4 45.000004 29 GTCGTCA 20 7.030851E-4 45.000004 15 ACGTCGA 30 2.1639298E-6 45.000004 2 TATAGCG 30 2.1639298E-6 45.000004 1 CCGAAAT 20 7.030851E-4 45.000004 44 ATACGAA 60 0.0 45.000004 19 TTCGCGA 30 2.1639298E-6 45.000004 2 TGTAACG 20 7.030851E-4 45.000004 1 GTAACGA 20 7.030851E-4 45.000004 2 AGTCGAT 20 7.030851E-4 45.000004 43 TTGGCGA 35 1.2107557E-7 45.0 2 CCGATCG 25 3.8887883E-5 45.0 40 TACGCTA 25 3.8887883E-5 45.0 1 GTAGCGA 50 2.1827873E-11 45.0 2 AGCGATA 25 3.8887883E-5 45.0 8 >>END_MODULE